RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 ZNF846Q147U1 533 aa12.63□□□□□ -0.39
CD9-209ENST00000540891 ETFRF1Q6IPR1 90 aa12.63□□□□□ -0.39
CD9-209ENST00000540891 SLC16A13Q7RTY0 426 aa12.63□□□□□ -0.39
CD9-209ENST00000540891 OR4D5Q8NGN0 318 aa12.63□□□□□ -0.39
CD9-209ENST00000540891 SPAG8Q99932 426 aaPredicted RBP12.63□□□□□ -0.39
CD9-209ENST00000540891 GINS3Q9BRX5 216 aa12.63□□□□□ -0.39
CD9-209ENST00000540891 NUDT15Q9NV35 164 aa12.63□□□□□ -0.39
CD9-209ENST00000540891 U3KQK5 164 aa12.63□□□□□ -0.39
CD9-209ENST00000540891 TRAV30A0A087WSZ9 112 aa12.62□□□□□ -0.39
CD9-209ENST00000540891 OR11H12B2RN74 326 aa12.62□□□□□ -0.39
CD9-209ENST00000540891 MED6O75586 246 aa12.62□□□□□ -0.39
CD9-209ENST00000540891 UPK1BO75841 260 aa12.62□□□□□ -0.39
CD9-209ENST00000540891 IFNA4P05014 189 aa12.62□□□□□ -0.39
CD9-209ENST00000540891 ID3Q02535 119 aa12.62□□□□□ -0.39
CD9-209ENST00000540891 ASAH1Q13510 395 aa12.62□□□□□ -0.39
CD9-209ENST00000540891 FAM90A2PQ658T7 463 aa12.62□□□□□ -0.39
CD9-209ENST00000540891 LILRB2Q8N423 598 aa12.62□□□□□ -0.39
CD9-209ENST00000540891 OR1S2Q8NGQ3 325 aa12.62□□□□□ -0.39
CD9-209ENST00000540891 NPIPB3Q92617 1050 aa12.62□□□□□ -0.39
CD9-209ENST00000540891 VSIRQ9H7M9 311 aa12.62□□□□□ -0.39
CD9-209ENST00000540891 WRBO00258 174 aa12.61□□□□□ -0.39
CD9-209ENST00000540891 OR10J1P30954 320 aa12.61□□□□□ -0.39
CD9-209ENST00000540891 ST8SIA2Q92186 375 aa12.61□□□□□ -0.39
CD9-209ENST00000540891 ACY3Q96HD9 319 aa12.61□□□□□ -0.39
CD9-209ENST00000540891 SEC22CQ9BRL7 303 aa12.61□□□□□ -0.39
CD9-209ENST00000540891 TM2D3Q9BRN9 247 aa12.61□□□□□ -0.39
CD9-209ENST00000540891 TUBA4BQ9H853 241 aa12.61□□□□□ -0.39
CD9-209ENST00000540891 FAM240BA0A1B0GVZ2 78 aa12.6□□□□□ -0.39
CD9-209ENST00000540891 RBMY1BA6NDE4 496 aaKnown RBP12.6□□□□□ -0.39
CD9-209ENST00000540891 RBMY1EA6NEQ0 496 aaKnown RBP12.6□□□□□ -0.39
CD9-209ENST00000540891 PRSS46E5RG02 174 aa12.6□□□□□ -0.39
CD9-209ENST00000540891 IFNA21P01568 189 aa12.6□□□□□ -0.39
CD9-209ENST00000540891 RBMY1DP0C7P1 496 aaKnown RBP12.6□□□□□ -0.39
CD9-209ENST00000540891 GPX4P36969 197 aaPredicted RBP12.6□□□□□ -0.39
CD9-209ENST00000540891 YPEL3P61236 119 aaPredicted RBP12.6□□□□□ -0.39
CD9-209ENST00000540891 POLR2GP62487 172 aaKnown RBP eCLIP12.6□□□□□ -0.39
CD9-209ENST00000540891 GAMTQ14353 236 aa12.6□□□□□ -0.39
CD9-209ENST00000540891 HAGHQ16775 308 aa12.6□□□□□ -0.39
CD9-209ENST00000540891 LAMTOR1Q6IAA8 161 aa12.6□□□□□ -0.39
CD9-209ENST00000540891 CIB3Q96Q77 187 aaPredicted RBP12.6□□□□□ -0.39
CD9-209ENST00000540891 CITED4Q96RK1 184 aa12.6□□□□□ -0.39
CD9-209ENST00000540891 SRD5A3Q9H8P0 318 aa12.6□□□□□ -0.39
CD9-209ENST00000540891 IGKV1D-37A0A075B6S9 117 aa12.59□□□□□ -0.39
CD9-209ENST00000540891 IGHV3-66A0A0C4DH42 116 aa12.59□□□□□ -0.39
CD9-209ENST00000540891 SCGB2A1O75556 95 aa12.59□□□□□ -0.39
CD9-209ENST00000540891 H2AFB2P0C5Z0 115 aa12.59□□□□□ -0.39
CD9-209ENST00000540891 NKX2-1P43699 371 aaPredicted RBP12.59□□□□□ -0.39
CD9-209ENST00000540891 MZT2BQ6NZ67 158 aa12.59□□□□□ -0.39
CD9-209ENST00000540891 ZNF431Q8TF32 576 aaPredicted RBP12.59□□□□□ -0.39
CD9-209ENST00000540891 H3BP45 60 aa12.58□□□□□ -0.4
CD9-209ENST00000540891 CRYBB3P26998 211 aa12.58□□□□□ -0.4
CD9-209ENST00000540891 RAB11AP62491 216 aa12.58□□□□□ -0.4
CD9-209ENST00000540891 IAH1Q2TAA2 248 aaPredicted RBP12.58□□□□□ -0.4
CD9-209ENST00000540891 ODF3L2Q3SX64 289 aa12.58□□□□□ -0.4
CD9-209ENST00000540891 TCF24Q7RTU0 167 aa12.58□□□□□ -0.4
CD9-209ENST00000540891 ZBTB8BQ8NAP8 495 aaPredicted RBP12.58□□□□□ -0.4
CD9-209ENST00000540891 Q8WTZ3 238 aa12.58□□□□□ -0.4
CD9-209ENST00000540891 RCHY1Q96PM5 261 aa12.58□□□□□ -0.4
CD9-209ENST00000540891 UBQLN2Q9UHD9 624 aa12.58□□□□□ -0.4
CD9-209ENST00000540891 PAIP2BQ9ULR5 123 aaKnown RBP12.58□□□□□ -0.4
CD9-209ENST00000540891 CCSO14618 274 aa12.57□□□□□ -0.4
CD9-209ENST00000540891 DFFBO76075 338 aa12.57□□□□□ -0.4
CD9-209ENST00000540891 TOMM40O96008 361 aa12.57□□□□□ -0.4
CD9-209ENST00000540891 PSG1P11464 419 aa12.57□□□□□ -0.4
CD9-209ENST00000540891 NPPCP23582 126 aa12.57□□□□□ -0.4
CD9-209ENST00000540891 PAX9P55771 341 aa12.57□□□□□ -0.4
CD9-209ENST00000540891 USF2Q15853 346 aaPredicted RBP12.57□□□□□ -0.4
CD9-209ENST00000540891 SPANXN5Q5MJ07 72 aa12.57□□□□□ -0.4
CD9-209ENST00000540891 SLC35E1Q96K37 410 aa12.57□□□□□ -0.4
CD9-209ENST00000540891 METTL26Q96S19 204 aa12.57□□□□□ -0.4
CD9-209ENST00000540891 U3KQE9 123 aa12.57□□□□□ -0.4
CD9-209ENST00000540891 IGKV3-7A0A075B6H7 116 aa12.56□□□□□ -0.4
CD9-209ENST00000540891 OR4C46A6NHA9 309 aa12.56□□□□□ -0.4
CD9-209ENST00000540891 SSSCA1O60232 199 aa12.56□□□□□ -0.4
CD9-209ENST00000540891 BMI1P35226 326 aa12.56□□□□□ -0.4
CD9-209ENST00000540891 RPP30P78346 268 aaKnown RBP12.56□□□□□ -0.4
CD9-209ENST00000540891 ZNF90Q03938 601 aa12.56□□□□□ -0.4
CD9-209ENST00000540891 WWC2-AS2Q96NR7 200 aa12.56□□□□□ -0.4
CD9-209ENST00000540891 ZMAT4Q9H898 229 aa12.56□□□□□ -0.4
CD9-209ENST00000540891 RCL1Q9Y2P8 373 aaKnown RBP12.56□□□□□ -0.4
CD9-209ENST00000540891 IGKV1OR2-108A0A075B7D4 117 aa12.55□□□□□ -0.4
CD9-209ENST00000540891 PMS2P5A8MQ11 134 aa12.55□□□□□ -0.4
CD9-209ENST00000540891 SCGB1D2O95969 90 aa12.55□□□□□ -0.4
CD9-209ENST00000540891 IL4P05112 153 aa12.55□□□□□ -0.4
CD9-209ENST00000540891 RD3LP0DJH9 198 aa12.55□□□□□ -0.4
CD9-209ENST00000540891 TFPI2P48307 235 aa12.55□□□□□ -0.4
CD9-209ENST00000540891 GBGT1Q8N5D6 347 aa12.55□□□□□ -0.4
CD9-209ENST00000540891 C12orf45Q8N5I9 185 aaPredicted RBP12.55□□□□□ -0.4
CD9-209ENST00000540891 SMIM8Q96KF7 97 aa12.55□□□□□ -0.4
CD9-209ENST00000540891 FAM110AQ9BQ89 295 aa12.55□□□□□ -0.4
CD9-209ENST00000540891 PSENENQ9NZ42 101 aa12.55□□□□□ -0.4
CD9-209ENST00000540891 GSKIPQ9P0R6 139 aa12.55□□□□□ -0.4
CD9-209ENST00000540891 STRAPQ9Y3F4 350 aaKnown RBP12.55□□□□□ -0.4
CD9-209ENST00000540891 A0A1W2PS18 150 aa12.54□□□□□ -0.4
CD9-209ENST00000540891 ZFP92A6NM28 416 aa12.54□□□□□ -0.4
CD9-209ENST00000540891 MBPP02686 304 aaPredicted RBP12.54□□□□□ -0.4
CD9-209ENST00000540891 IL5P05113 134 aa12.54□□□□□ -0.4
CD9-209ENST00000540891 CD5P06127 495 aa12.54□□□□□ -0.4
CD9-209ENST00000540891 HNRNPCP07910 306 aaKnown RBP eCLIP12.54□□□□□ -0.4
CD9-209ENST00000540891 P2RY1P47900 373 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms