RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 NPIPB5A8MRT5 1133 aa17.71■□□□□ 0.43
HOMER3-204ENST00000539827 J3QKU1 62 aa17.71■□□□□ 0.43
HOMER3-204ENST00000539827 HLA-DRB1P01911 266 aa17.71■□□□□ 0.43
HOMER3-204ENST00000539827 ZNF674Q2M3X9 581 aa17.71■□□□□ 0.43
HOMER3-204ENST00000539827 MORN5Q5VZ52 161 aa17.71■□□□□ 0.43
HOMER3-204ENST00000539827 HIST2H2BCQ6DN03 193 aa17.71■□□□□ 0.43
HOMER3-204ENST00000539827 TMEM219Q86XT9 240 aa17.71■□□□□ 0.43
HOMER3-204ENST00000539827 LINC01356Q8N9X3 169 aa17.71■□□□□ 0.43
HOMER3-204ENST00000539827 OR5T1Q8NG75 326 aa17.71■□□□□ 0.43
HOMER3-204ENST00000539827 TVP23CQ96ET8 276 aa17.71■□□□□ 0.43
HOMER3-204ENST00000539827 BEX4Q9NWD9 120 aaPredicted RBP17.71■□□□□ 0.43
HOMER3-204ENST00000539827 VPS13CQ709C8 3753 aa17.71■□□□□ 0.43
HOMER3-204ENST00000539827 TTC9CQ8N5M4 171 aa17.71■□□□□ 0.43
HOMER3-204ENST00000539827 OR1L6Q8NGR2 347 aa17.71■□□□□ 0.43
HOMER3-204ENST00000539827 RPUSD4Q96CM3 377 aaKnown RBP17.71■□□□□ 0.43
HOMER3-204ENST00000539827 RNF223E7ERA6 249 aa17.7■□□□□ 0.42
HOMER3-204ENST00000539827 OR1L4Q8NGR5 311 aa17.7■□□□□ 0.42
HOMER3-204ENST00000539827 PIFOQ8TCI5 191 aa17.7■□□□□ 0.42
HOMER3-204ENST00000539827 ZNF503Q96F45 646 aa17.7■□□□□ 0.42
HOMER3-204ENST00000539827 RBM14Q96PK6 669 aaKnown RBP17.7■□□□□ 0.42
HOMER3-204ENST00000539827 FANCD2OSQ96PS1 177 aa17.7■□□□□ 0.42
HOMER3-204ENST00000539827 MEGF9Q9H1U4 602 aa17.7■□□□□ 0.42
HOMER3-204ENST00000539827 TUBA4BQ9H853 241 aa17.7■□□□□ 0.42
HOMER3-204ENST00000539827 S4R3C0 116 aa17.7■□□□□ 0.42
HOMER3-204ENST00000539827 ZNF727A8MUV8 499 aa17.7■□□□□ 0.42
HOMER3-204ENST00000539827 TSPAN9O75954 239 aa17.7■□□□□ 0.42
HOMER3-204ENST00000539827 C10orf113Q5VZT2 155 aa17.7■□□□□ 0.42
HOMER3-204ENST00000539827 YTHDF2Q9Y5A9 579 aaKnown RBP17.7■□□□□ 0.42
HOMER3-204ENST00000539827 TMEM250H0YL14 139 aa17.69■□□□□ 0.42
HOMER3-204ENST00000539827 OR7C2O60412 319 aa17.69■□□□□ 0.42
HOMER3-204ENST00000539827 C8orf88P0DMB2 117 aa17.69■□□□□ 0.42
HOMER3-204ENST00000539827 TIGITQ495A1 244 aa17.69■□□□□ 0.42
HOMER3-204ENST00000539827 UHRF2Q96PU4 802 aa17.69■□□□□ 0.42
HOMER3-204ENST00000539827 RNF2Q99496 336 aa17.69■□□□□ 0.42
HOMER3-204ENST00000539827 MRPL32Q9BYC8 188 aaKnown RBP17.69■□□□□ 0.42
HOMER3-204ENST00000539827 IGLC1P0CG04 106 aa17.68■□□□□ 0.42
HOMER3-204ENST00000539827 FOLR2P14207 255 aa17.68■□□□□ 0.42
HOMER3-204ENST00000539827 ORM2P19652 201 aa17.68■□□□□ 0.42
HOMER3-204ENST00000539827 NPPCP23582 126 aa17.68■□□□□ 0.42
HOMER3-204ENST00000539827 TAS2R45P59539 299 aa17.68■□□□□ 0.42
HOMER3-204ENST00000539827 BPIFB3P59826 476 aa17.68■□□□□ 0.42
HOMER3-204ENST00000539827 OR1B1Q8NGR6 318 aa17.68■□□□□ 0.42
HOMER3-204ENST00000539827 PFDN5Q99471 154 aa17.68■□□□□ 0.42
HOMER3-204ENST00000539827 SSX3Q99909 188 aa17.68■□□□□ 0.42
HOMER3-204ENST00000539827 ABCA1O95477 2261 aa17.68■□□□□ 0.42
HOMER3-204ENST00000539827 IGLV11-55A0A075B6I3 123 aa17.68■□□□□ 0.42
HOMER3-204ENST00000539827 C5orf56Q8N8D9 126 aa17.68■□□□□ 0.42
HOMER3-204ENST00000539827 SMIM7Q9BQ49 75 aa17.68■□□□□ 0.42
HOMER3-204ENST00000539827 SLC25A2Q9BXI2 301 aa17.68■□□□□ 0.42
HOMER3-204ENST00000539827 PARLQ9H300 379 aa17.68■□□□□ 0.42
HOMER3-204ENST00000539827 LINC01548A6NM66 108 aa17.67■□□□□ 0.42
HOMER3-204ENST00000539827 ANKRD17O75179 2603 aaKnown RBP17.67■□□□□ 0.42
HOMER3-204ENST00000539827 GATA3P23771 443 aa17.67■□□□□ 0.42
HOMER3-204ENST00000539827 Q5PR19 223 aa17.67■□□□□ 0.42
HOMER3-204ENST00000539827 FAM167A-AS1Q96KT0 104 aa17.67■□□□□ 0.42
HOMER3-204ENST00000539827 ZNF355PQ9NSJ1 428 aa17.67■□□□□ 0.42
HOMER3-204ENST00000539827 ATP6V0E1O15342 81 aa17.66■□□□□ 0.42
HOMER3-204ENST00000539827 CLN5O75503 358 aa17.66■□□□□ 0.42
HOMER3-204ENST00000539827 OR10J4P0C629 311 aa17.66■□□□□ 0.42
HOMER3-204ENST00000539827 LOXL1Q08397 574 aaPredicted RBP17.66■□□□□ 0.42
HOMER3-204ENST00000539827 ECSCRQ19T08 205 aa17.66■□□□□ 0.42
HOMER3-204ENST00000539827 PQLC2Q6ZP29 291 aa17.66■□□□□ 0.42
HOMER3-204ENST00000539827 OR51G1Q8NGK1 321 aa17.66■□□□□ 0.42
HOMER3-204ENST00000539827 SDF2L1Q9HCN8 221 aa17.66■□□□□ 0.42
HOMER3-204ENST00000539827 COLCA2A8K830 154 aa17.66■□□□□ 0.42
HOMER3-204ENST00000539827 NDUFS6O75380 124 aaKnown RBP17.66■□□□□ 0.42
HOMER3-204ENST00000539827 TGFAP01135 160 aa17.66■□□□□ 0.42
HOMER3-204ENST00000539827 LY6EQ16553 131 aa17.66■□□□□ 0.42
HOMER3-204ENST00000539827 UNQ5815/PRO19632Q6UWF5 114 aa17.66■□□□□ 0.42
HOMER3-204ENST00000539827 LRRC75A-AS1Q8N1F1 130 aa17.66■□□□□ 0.42
HOMER3-204ENST00000539827 OR5AU1Q8NGC0 362 aa17.66■□□□□ 0.42
HOMER3-204ENST00000539827 SGMS2Q8NHU3 365 aa17.66■□□□□ 0.42
HOMER3-204ENST00000539827 TMEM167BQ9NRX6 74 aa17.66■□□□□ 0.42
HOMER3-204ENST00000539827 MOB4Q9Y3A3 225 aa17.66■□□□□ 0.42
HOMER3-204ENST00000539827 USP9YO00507 2555 aaPredicted RBP17.65■□□□□ 0.42
HOMER3-204ENST00000539827 OR2J3O76001 311 aa17.65■□□□□ 0.42
HOMER3-204ENST00000539827 NDUFB8O95169 186 aa17.65■□□□□ 0.42
HOMER3-204ENST00000539827 LINC00305Q7Z4B0 112 aa17.65■□□□□ 0.42
HOMER3-204ENST00000539827 POLQO75417 2590 aa17.64■□□□□ 0.42
HOMER3-204ENST00000539827 PDE6DO43924 150 aa17.64■□□□□ 0.41
HOMER3-204ENST00000539827 MT-ND4LP03901 98 aa17.64■□□□□ 0.41
HOMER3-204ENST00000539827 PSG1P11464 419 aa17.64■□□□□ 0.41
HOMER3-204ENST00000539827 TMUB1Q9BVT8 246 aa17.64■□□□□ 0.41
HOMER3-204ENST00000539827 F6UZH7 168 aa17.64■□□□□ 0.41
HOMER3-204ENST00000539827 IGKV1-17P01599 117 aa17.64■□□□□ 0.41
HOMER3-204ENST00000539827 RNF212Q495C1 297 aa17.64■□□□□ 0.41
HOMER3-204ENST00000539827 ISOC2Q96AB3 205 aa17.64■□□□□ 0.41
HOMER3-204ENST00000539827 NAT8Q9UHE5 227 aa17.64■□□□□ 0.41
HOMER3-204ENST00000539827 ELOA3CA0A087WX78 387 aaPredicted RBP17.63■□□□□ 0.41
HOMER3-204ENST00000539827 H3BUX3 64 aa17.63■□□□□ 0.41
HOMER3-204ENST00000539827 HYPMO75409 117 aa17.63■□□□□ 0.41
HOMER3-204ENST00000539827 CRYBA1P05813 215 aa17.63■□□□□ 0.41
HOMER3-204ENST00000539827 RAB5BP61020 215 aa17.63■□□□□ 0.41
HOMER3-204ENST00000539827 LYZP61626 148 aa17.63■□□□□ 0.41
HOMER3-204ENST00000539827 TMEM241Q24JQ0 296 aa17.63■□□□□ 0.41
HOMER3-204ENST00000539827 TXNDC17Q9BRA2 123 aa17.63■□□□□ 0.41
HOMER3-204ENST00000539827 BIN3Q9NQY0 253 aa17.63■□□□□ 0.41
HOMER3-204ENST00000539827 SVEP1Q4LDE5 3571 aa17.63■□□□□ 0.41
HOMER3-204ENST00000539827 SCO2A0A1W2PP80 73 aa17.62■□□□□ 0.41
HOMER3-204ENST00000539827 NDUFB4O95168 129 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms