RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 ZNRF1Q8ND25 227 aa14.28□□□□□ -0.12
RAB40C-205ENST00000539661 OR2Z1Q8NG97 314 aa14.28□□□□□ -0.12
RAB40C-205ENST00000539661 MS4A6AQ9H2W1 248 aa14.28□□□□□ -0.12
RAB40C-205ENST00000539661 VWC2LB2RUY7 222 aa14.28□□□□□ -0.12
RAB40C-205ENST00000539661 INS-IGF2F8WCM5 200 aa14.28□□□□□ -0.12
RAB40C-205ENST00000539661 MYCNOSP40205 109 aa14.28□□□□□ -0.12
RAB40C-205ENST00000539661 C10orf113Q5VZT2 155 aa14.28□□□□□ -0.12
RAB40C-205ENST00000539661 CD5LO43866 347 aa14.28□□□□□ -0.12
RAB40C-205ENST00000539661 TMEM30BQ3MIR4 351 aa14.28□□□□□ -0.12
RAB40C-205ENST00000539661 UTF1Q5T230 341 aa14.28□□□□□ -0.12
RAB40C-205ENST00000539661 PRR27Q6MZM9 219 aa14.28□□□□□ -0.12
RAB40C-205ENST00000539661 PET117Q6UWS5 81 aa14.28□□□□□ -0.12
RAB40C-205ENST00000539661 KLF12Q9Y4X4 402 aa14.28□□□□□ -0.12
RAB40C-205ENST00000539661 PRR14LQ5THK1 2151 aa14.27□□□□□ -0.12
RAB40C-205ENST00000539661 C9orf172C9J069 976 aa14.27□□□□□ -0.13
RAB40C-205ENST00000539661 PYYP10082 97 aa14.27□□□□□ -0.13
RAB40C-205ENST00000539661 MLANAQ16655 118 aa14.27□□□□□ -0.13
RAB40C-205ENST00000539661 ST6GALNAC6Q969X2 333 aa14.27□□□□□ -0.13
RAB40C-205ENST00000539661 SCRT2Q9NQ03 307 aa14.27□□□□□ -0.13
RAB40C-205ENST00000539661 A8MWL6 223 aa14.27□□□□□ -0.13
RAB40C-205ENST00000539661 IGLV1-44P01699 117 aa14.27□□□□□ -0.13
RAB40C-205ENST00000539661 LIPFP07098 398 aa14.27□□□□□ -0.13
RAB40C-205ENST00000539661 LDLRAD2Q5SZI1 272 aa14.27□□□□□ -0.13
RAB40C-205ENST00000539661 ASPHD1Q5U4P2 390 aa14.27□□□□□ -0.13
RAB40C-205ENST00000539661 FXYD5Q96DB9 178 aa14.27□□□□□ -0.13
RAB40C-205ENST00000539661 VPS25Q9BRG1 176 aa14.27□□□□□ -0.13
RAB40C-205ENST00000539661 RPP21Q9H633 154 aaKnown RBP14.27□□□□□ -0.13
RAB40C-205ENST00000539661 IGHV3OR15-7A0A075B7D8 119 aa14.26□□□□□ -0.13
RAB40C-205ENST00000539661 M0QZ24 198 aa14.26□□□□□ -0.13
RAB40C-205ENST00000539661 ERHP84090 104 aaKnown RBP14.26□□□□□ -0.13
RAB40C-205ENST00000539661 GUSBP1Q15486 140 aa14.26□□□□□ -0.13
RAB40C-205ENST00000539661 ETFRF1Q6IPR1 90 aa14.26□□□□□ -0.13
RAB40C-205ENST00000539661 PRSS22Q9GZN4 317 aa14.26□□□□□ -0.13
RAB40C-205ENST00000539661 GFRA4Q9GZZ7 299 aa14.26□□□□□ -0.13
RAB40C-205ENST00000539661 hDV102S1A0JD36 115 aa14.26□□□□□ -0.13
RAB40C-205ENST00000539661 CORTO00230 105 aa14.26□□□□□ -0.13
RAB40C-205ENST00000539661 HIST1H1AQ02539 215 aaPredicted RBP14.26□□□□□ -0.13
RAB40C-205ENST00000539661 STXBP6Q8NFX7 210 aa14.26□□□□□ -0.13
RAB40C-205ENST00000539661 GPR82Q96P67 336 aa14.26□□□□□ -0.13
RAB40C-205ENST00000539661 ZNF430Q9H8G1 570 aaPredicted RBP14.26□□□□□ -0.13
RAB40C-205ENST00000539661 ZNF492Q9P255 531 aa14.26□□□□□ -0.13
RAB40C-205ENST00000539661 EPDR1Q9UM22 224 aa14.26□□□□□ -0.13
RAB40C-205ENST00000539661 RP1L1Q8IWN7 2480 aaPredicted RBP14.25□□□□□ -0.13
RAB40C-205ENST00000539661 SRRM4A7MD48 611 aaKnown RBP14.25□□□□□ -0.13
RAB40C-205ENST00000539661 CT45A6P0DMU7 189 aa14.25□□□□□ -0.13
RAB40C-205ENST00000539661 CT45A5P0DMU8 189 aa14.25□□□□□ -0.13
RAB40C-205ENST00000539661 CT45A7P0DMV0 189 aa14.25□□□□□ -0.13
RAB40C-205ENST00000539661 PSG1P11464 419 aa14.25□□□□□ -0.13
RAB40C-205ENST00000539661 RNFT1Q5M7Z0 435 aa14.25□□□□□ -0.13
RAB40C-205ENST00000539661 ZNF841Q6ZN19 808 aa14.25□□□□□ -0.13
RAB40C-205ENST00000539661 NDFIP1Q9BT67 221 aa14.25□□□□□ -0.13
RAB40C-205ENST00000539661 MLST8Q9BVC4 326 aa14.25□□□□□ -0.13
RAB40C-205ENST00000539661 MAP1LC3CQ9BXW4 147 aa14.25□□□□□ -0.13
RAB40C-205ENST00000539661 NDUFA4L2Q9NRX3 87 aa14.25□□□□□ -0.13
RAB40C-205ENST00000539661 OTOGLQ3ZCN5 2332 aa14.25□□□□□ -0.13
RAB40C-205ENST00000539661 MUC21A0A0G2JKD1 596 aa14.25□□□□□ -0.13
RAB40C-205ENST00000539661 MUC21A0A140T8X8 626 aa14.25□□□□□ -0.13
RAB40C-205ENST00000539661 OR2T8A6NH00 312 aa14.25□□□□□ -0.13
RAB40C-205ENST00000539661 LHBP01229 141 aa14.25□□□□□ -0.13
RAB40C-205ENST00000539661 SP9P0CG40 484 aa14.25□□□□□ -0.13
RAB40C-205ENST00000539661 MUC21Q5SSG8 566 aa14.25□□□□□ -0.13
RAB40C-205ENST00000539661 TCRBV4S1A1TA0A5B7 111 aa14.24□□□□□ -0.13
RAB40C-205ENST00000539661 FAM231BA6NCW3 169 aa14.24□□□□□ -0.13
RAB40C-205ENST00000539661 SH2D7A6NKC9 451 aaPredicted RBP14.24□□□□□ -0.13
RAB40C-205ENST00000539661 FSTL3O95633 263 aa14.24□□□□□ -0.13
RAB40C-205ENST00000539661 ATP1A1-AS1Q5TC04 95 aa14.24□□□□□ -0.13
RAB40C-205ENST00000539661 PATE2Q6UY27 113 aa14.24□□□□□ -0.13
RAB40C-205ENST00000539661 PMCHL2Q9BQD1 86 aa14.24□□□□□ -0.13
RAB40C-205ENST00000539661 LINC00574Q9H8X3 128 aa14.24□□□□□ -0.13
RAB40C-205ENST00000539661 CEP250Q9BV73 2442 aa14.24□□□□□ -0.13
RAB40C-205ENST00000539661 IGKV1-16P04430 117 aa14.24□□□□□ -0.13
RAB40C-205ENST00000539661 SAA1P0DJI8 122 aaPredicted RBP14.24□□□□□ -0.13
RAB40C-205ENST00000539661 TCF24Q7RTU0 167 aa14.24□□□□□ -0.13
RAB40C-205ENST00000539661 PDPNQ86YL7 162 aa14.24□□□□□ -0.13
RAB40C-205ENST00000539661 OSR1Q8TAX0 266 aaPredicted RBP14.24□□□□□ -0.13
RAB40C-205ENST00000539661 HSPB8Q9UJY1 196 aa14.24□□□□□ -0.13
RAB40C-205ENST00000539661 AMMECR1LQ6DCA0 310 aa14.23□□□□□ -0.13
RAB40C-205ENST00000539661 FAM71F2Q6NXP2 309 aa14.23□□□□□ -0.13
RAB40C-205ENST00000539661 SLC25A48Q6ZT89 311 aaKnown RBP14.23□□□□□ -0.13
RAB40C-205ENST00000539661 THAP8Q8NA92 274 aa14.23□□□□□ -0.13
RAB40C-205ENST00000539661 FER1L6-AS2Q96M78 137 aa14.23□□□□□ -0.13
RAB40C-205ENST00000539661 K7ERU9 68 aa14.23□□□□□ -0.13
RAB40C-205ENST00000539661 DHRS13Q6UX07 377 aa14.23□□□□□ -0.13
RAB40C-205ENST00000539661 LINC00173Q6ZV60 143 aa14.23□□□□□ -0.13
RAB40C-205ENST00000539661 OR10W1Q8NGF6 305 aa14.23□□□□□ -0.13
RAB40C-205ENST00000539661 PEF1Q9UBV8 284 aaKnown RBP14.23□□□□□ -0.13
RAB40C-205ENST00000539661 ZNF835Q9Y2P0 537 aa14.23□□□□□ -0.13
RAB40C-205ENST00000539661 ADGRG4Q8IZF6 3080 aa14.22□□□□□ -0.13
RAB40C-205ENST00000539661 C19orf71A6NCJ1 209 aa14.22□□□□□ -0.13
RAB40C-205ENST00000539661 FOXA3P55318 350 aaPredicted RBP14.22□□□□□ -0.13
RAB40C-205ENST00000539661 RBPMS2Q6ZRY4 209 aaKnown RBP14.22□□□□□ -0.13
RAB40C-205ENST00000539661 TMEM178AQ8NBL3 297 aa14.22□□□□□ -0.13
RAB40C-205ENST00000539661 FAM222BQ8WU58 562 aa14.22□□□□□ -0.13
RAB40C-205ENST00000539661 H1FXQ92522 213 aaKnown RBP14.22□□□□□ -0.13
RAB40C-205ENST00000539661 FMC1Q96HJ9 113 aa14.22□□□□□ -0.13
RAB40C-205ENST00000539661 PTPRZ1P23471 2315 aaPredicted RBP14.22□□□□□ -0.13
RAB40C-205ENST00000539661 ZNF292O60281 2723 aa14.22□□□□□ -0.13
RAB40C-205ENST00000539661 BSNQ9UPA5 3926 aa14.22□□□□□ -0.13
RAB40C-205ENST00000539661 IGHV1-18A0A0C4DH31 117 aa14.22□□□□□ -0.13
RAB40C-205ENST00000539661 CBY3A6NI87 242 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms