RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 UFC1Q9Y3C8 167 aa11.88□□□□□ -0.51
RPAIN-206ENST00000539417 PUS1Q9Y606 427 aaKnown RBP eCLIP11.88□□□□□ -0.51
RPAIN-206ENST00000539417 RPS10-NUDT3A0A1W2PQS6 291 aa11.87□□□□□ -0.51
RPAIN-206ENST00000539417 C5orf51A6NDU8 294 aa11.87□□□□□ -0.51
RPAIN-206ENST00000539417 RELQ04864 619 aaPredicted RBP11.87□□□□□ -0.51
RPAIN-206ENST00000539417 GAMTQ14353 236 aa11.87□□□□□ -0.51
RPAIN-206ENST00000539417 TMEM61Q8N0U2 210 aa11.87□□□□□ -0.51
RPAIN-206ENST00000539417 Q8N1Y9 231 aa11.87□□□□□ -0.51
RPAIN-206ENST00000539417 TMEM116Q8NCL8 245 aa11.87□□□□□ -0.51
RPAIN-206ENST00000539417 DYNLRB2Q8TF09 96 aa11.87□□□□□ -0.51
RPAIN-206ENST00000539417 COL7A1Q02388 2944 aa11.86□□□□□ -0.51
RPAIN-206ENST00000539417 IGKV1D-37A0A075B6S9 117 aa11.86□□□□□ -0.51
RPAIN-206ENST00000539417 IGHV3OR16-13A0A075B7E8 117 aa11.86□□□□□ -0.51
RPAIN-206ENST00000539417 IGHV3-74A0A0B4J1X5 117 aa11.86□□□□□ -0.51
RPAIN-206ENST00000539417 PMS2P5A8MQ11 134 aa11.86□□□□□ -0.51
RPAIN-206ENST00000539417 APOHP02749 345 aaPredicted RBP11.86□□□□□ -0.51
RPAIN-206ENST00000539417 HNRNPCP07910 306 aaKnown RBP eCLIP11.86□□□□□ -0.51
RPAIN-206ENST00000539417 SLC25A4P12235 298 aa11.86□□□□□ -0.51
RPAIN-206ENST00000539417 ELLP55199 621 aaPredicted RBP11.86□□□□□ -0.51
RPAIN-206ENST00000539417 IL15RAQ13261 267 aa11.86□□□□□ -0.51
RPAIN-206ENST00000539417 ZNF600Q6ZNG1 722 aa11.86□□□□□ -0.51
RPAIN-206ENST00000539417 C2orf50Q96LR7 162 aa11.86□□□□□ -0.51
RPAIN-206ENST00000539417 CIB3Q96Q77 187 aaPredicted RBP11.86□□□□□ -0.51
RPAIN-206ENST00000539417 DAZ1Q9NQZ3 744 aaKnown RBP11.86□□□□□ -0.51
RPAIN-206ENST00000539417 PSENENQ9NZ42 101 aa11.86□□□□□ -0.51
RPAIN-206ENST00000539417 MRPL27Q9P0M9 148 aaKnown RBP11.86□□□□□ -0.51
RPAIN-206ENST00000539417 K7EMT4 169 aa11.85□□□□□ -0.51
RPAIN-206ENST00000539417 K7EPK0 472 aa11.85□□□□□ -0.51
RPAIN-206ENST00000539417 OR10J1P30954 320 aa11.85□□□□□ -0.51
RPAIN-206ENST00000539417 NOXA1Q86UR1 476 aa11.85□□□□□ -0.51
RPAIN-206ENST00000539417 LILRB2Q8N423 598 aa11.85□□□□□ -0.51
RPAIN-206ENST00000539417 SMIM8Q96KF7 97 aa11.85□□□□□ -0.51
RPAIN-206ENST00000539417 C11orf1Q9H5F2 150 aa11.85□□□□□ -0.51
RPAIN-206ENST00000539417 ZMAT5Q9UDW3 170 aaKnown RBP11.85□□□□□ -0.51
RPAIN-206ENST00000539417 IGKV1OR2-108A0A075B7D4 117 aa11.84□□□□□ -0.51
RPAIN-206ENST00000539417 C7orf66A4D0T2 115 aa11.84□□□□□ -0.51
RPAIN-206ENST00000539417 SNRPGP15A8MWD9 76 aa11.84□□□□□ -0.51
RPAIN-206ENST00000539417 SCAF4O95104 1147 aaKnown RBP11.84□□□□□ -0.51
RPAIN-206ENST00000539417 GPX4P36969 197 aaPredicted RBP11.84□□□□□ -0.51
RPAIN-206ENST00000539417 ATP5IP56385 69 aaPredicted RBP11.84□□□□□ -0.51
RPAIN-206ENST00000539417 LCN12Q6JVE5 192 aa11.84□□□□□ -0.51
RPAIN-206ENST00000539417 GPN1Q9HCN4 374 aaPredicted RBP11.84□□□□□ -0.51
RPAIN-206ENST00000539417 TECRQ9NZ01 308 aaKnown RBP11.84□□□□□ -0.51
RPAIN-206ENST00000539417 SMPXQ9UHP9 88 aa11.84□□□□□ -0.51
RPAIN-206ENST00000539417 STRAPQ9Y3F4 350 aaKnown RBP11.84□□□□□ -0.51
RPAIN-206ENST00000539417 LSM5Q9Y4Y9 91 aaKnown RBP11.84□□□□□ -0.51
RPAIN-206ENST00000539417 HUWE1Q7Z6Z7 4374 aaKnown RBP11.84□□□□□ -0.51
RPAIN-206ENST00000539417 IGHV3-66A0A0C4DH42 116 aa11.83□□□□□ -0.52
RPAIN-206ENST00000539417 IGHV7-4-1A0A0J9YVY3 117 aa11.83□□□□□ -0.52
RPAIN-206ENST00000539417 GOSR2O14653 212 aa11.83□□□□□ -0.52
RPAIN-206ENST00000539417 CHEK1O14757 476 aa11.83□□□□□ -0.52
RPAIN-206ENST00000539417 PRAF2O60831 178 aa11.83□□□□□ -0.52
RPAIN-206ENST00000539417 CD7P09564 240 aa11.83□□□□□ -0.52
RPAIN-206ENST00000539417 RAB11AP62491 216 aa11.83□□□□□ -0.52
RPAIN-206ENST00000539417 ARL16Q0P5N6 197 aa11.83□□□□□ -0.52
RPAIN-206ENST00000539417 ETFRF1Q6IPR1 90 aa11.83□□□□□ -0.52
RPAIN-206ENST00000539417 GSG1LQ6UXU4 331 aa11.83□□□□□ -0.52
RPAIN-206ENST00000539417 OR1S2Q8NGQ3 325 aa11.83□□□□□ -0.52
RPAIN-206ENST00000539417 OR2K2Q8NGT1 345 aa11.83□□□□□ -0.52
RPAIN-206ENST00000539417 MARC2Q969Z3 335 aa11.83□□□□□ -0.52
RPAIN-206ENST00000539417 METTL15P1P0C7V9 234 aa11.83□□□□□ -0.52
RPAIN-206ENST00000539417 ZNF90Q03938 601 aa11.83□□□□□ -0.52
RPAIN-206ENST00000539417 RAB32Q13637 225 aa11.83□□□□□ -0.52
RPAIN-206ENST00000539417 GUCA2BQ16661 112 aa11.83□□□□□ -0.52
RPAIN-206ENST00000539417 TMEM14EPQ6UXP3 125 aa11.83□□□□□ -0.52
RPAIN-206ENST00000539417 RNF2Q99496 336 aa11.83□□□□□ -0.52
RPAIN-206ENST00000539417 NEURL2Q9BR09 285 aa11.83□□□□□ -0.52
RPAIN-206ENST00000539417 RHPN1-AS1Q9BWJ2 59 aa11.83□□□□□ -0.52
RPAIN-206ENST00000539417 WFDC10AQ9H1F0 79 aa11.83□□□□□ -0.52
RPAIN-206ENST00000539417 TRAV30A0A087WSZ9 112 aa11.82□□□□□ -0.52
RPAIN-206ENST00000539417 TRAV14DV4A0A0A6YYC5 116 aa11.82□□□□□ -0.52
RPAIN-206ENST00000539417 H2BFSP57053 126 aa11.82□□□□□ -0.52
RPAIN-206ENST00000539417 YPEL3P61236 119 aaPredicted RBP11.82□□□□□ -0.52
RPAIN-206ENST00000539417 USF2Q15853 346 aaPredicted RBP11.82□□□□□ -0.52
RPAIN-206ENST00000539417 OR8G2PQ6IF36 304 aa11.82□□□□□ -0.52
RPAIN-206ENST00000539417 ACOT7LQ6ZUV0 252 aa11.82□□□□□ -0.52
RPAIN-206ENST00000539417 CHAC2Q8WUX2 184 aa11.82□□□□□ -0.52
RPAIN-206ENST00000539417 ST8SIA2Q92186 375 aa11.82□□□□□ -0.52
RPAIN-206ENST00000539417 SLC35E1Q96K37 410 aa11.82□□□□□ -0.52
RPAIN-206ENST00000539417 RAB40CQ96S21 281 aa11.82□□□□□ -0.52
RPAIN-206ENST00000539417 PSG1P11464 419 aa11.81□□□□□ -0.52
RPAIN-206ENST00000539417 S100A10P60903 97 aa11.81□□□□□ -0.52
RPAIN-206ENST00000539417 RPP30P78346 268 aaKnown RBP11.81□□□□□ -0.52
RPAIN-206ENST00000539417 TMEM182Q6ZP80 229 aaPredicted RBP11.81□□□□□ -0.52
RPAIN-206ENST00000539417 ALG5Q9Y673 324 aa11.81□□□□□ -0.52
RPAIN-206ENST00000539417 FAM24AA6NFZ4 105 aa11.8□□□□□ -0.52
RPAIN-206ENST00000539417 TSC22D2O75157 780 aa11.8□□□□□ -0.52
RPAIN-206ENST00000539417 TOMM40O96008 361 aa11.8□□□□□ -0.52
RPAIN-206ENST00000539417 TAS2R30P59541 319 aa11.8□□□□□ -0.52
RPAIN-206ENST00000539417 RRAS2P62070 204 aaPredicted RBP11.8□□□□□ -0.52
RPAIN-206ENST00000539417 OR2F1Q13607 317 aa11.8□□□□□ -0.52
RPAIN-206ENST00000539417 THAP8Q8NA92 274 aa11.8□□□□□ -0.52
RPAIN-206ENST00000539417 SMAD5-AS1Q9Y6J3 95 aa11.8□□□□□ -0.52
RPAIN-206ENST00000539417 ZFP92A6NM28 416 aa11.79□□□□□ -0.52
RPAIN-206ENST00000539417 RD3LP0DJH9 198 aa11.79□□□□□ -0.52
RPAIN-206ENST00000539417 CD81P60033 236 aa11.79□□□□□ -0.52
RPAIN-206ENST00000539417 FAM90A2PQ658T7 463 aa11.79□□□□□ -0.52
RPAIN-206ENST00000539417 OR51G1Q8NGK1 321 aa11.79□□□□□ -0.52
RPAIN-206ENST00000539417 Q8WTZ3 238 aa11.79□□□□□ -0.52
RPAIN-206ENST00000539417 ASCL2Q99929 193 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms