RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 PRTN3P24158 256 aa7.13□□□□□ -1.27
DDB1-213ENST00000539332 ARF6P62330 175 aa7.13□□□□□ -1.27
DDB1-213ENST00000539332 FOXL1Q12952 345 aa7.13□□□□□ -1.27
DDB1-213ENST00000539332 CT83Q5H943 113 aa7.13□□□□□ -1.27
DDB1-213ENST00000539332 COL5A1-AS1Q5SY13 56 aa7.13□□□□□ -1.27
DDB1-213ENST00000539332 HCP5Q6MZN7 132 aa7.13□□□□□ -1.27
DDB1-213ENST00000539332 HAPLN4Q86UW8 402 aa7.13□□□□□ -1.27
DDB1-213ENST00000539332 TMEM37Q8WXS4 190 aa7.13□□□□□ -1.27
DDB1-213ENST00000539332 MS4A10Q96PG2 267 aa7.13□□□□□ -1.27
DDB1-213ENST00000539332 CIB3Q96Q77 187 aaPredicted RBP7.13□□□□□ -1.27
DDB1-213ENST00000539332 TXNDC17Q9BRA2 123 aa7.13□□□□□ -1.27
DDB1-213ENST00000539332 ATG101Q9BSB4 218 aa7.13□□□□□ -1.27
DDB1-213ENST00000539332 QTRT1Q9BXR0 403 aaKnown RBP7.13□□□□□ -1.27
DDB1-213ENST00000539332 PARLQ9H300 379 aa7.13□□□□□ -1.27
DDB1-213ENST00000539332 BET1LQ9NYM9 111 aa7.13□□□□□ -1.27
DDB1-213ENST00000539332 PSENENQ9NZ42 101 aa7.13□□□□□ -1.27
DDB1-213ENST00000539332 FOXA2Q9Y261 457 aaPredicted RBP7.13□□□□□ -1.27
DDB1-213ENST00000539332 MXRA5Q9NR99 2828 aa7.12□□□□□ -1.27
DDB1-213ENST00000539332 NAV3Q8IVL0 2385 aa7.12□□□□□ -1.27
DDB1-213ENST00000539332 IGHV2-70DA0A0C4DH43 119 aa7.12□□□□□ -1.27
DDB1-213ENST00000539332 SRRM4A7MD48 611 aaKnown RBP7.12□□□□□ -1.27
DDB1-213ENST00000539332 BUB1B-PAK6H3BSN5 160 aa7.12□□□□□ -1.27
DDB1-213ENST00000539332 PDE6DO43924 150 aa7.12□□□□□ -1.27
DDB1-213ENST00000539332 IAPPP10997 89 aa7.12□□□□□ -1.27
DDB1-213ENST00000539332 PCP4P48539 62 aa7.12□□□□□ -1.27
DDB1-213ENST00000539332 DIAPH2-AS1Q14236 149 aa7.12□□□□□ -1.27
DDB1-213ENST00000539332 OR4A47Q6IF82 309 aa7.12□□□□□ -1.27
DDB1-213ENST00000539332 TEX43Q6ZNM6 134 aa7.12□□□□□ -1.27
DDB1-213ENST00000539332 DTD1Q8TEA8 209 aa7.12□□□□□ -1.27
DDB1-213ENST00000539332 TAF15Q92804 592 aaKnown RBP eCLIP7.12□□□□□ -1.27
DDB1-213ENST00000539332 Q96MF0 132 aa7.12□□□□□ -1.27
DDB1-213ENST00000539332 RSG1Q9BU20 258 aa7.12□□□□□ -1.27
DDB1-213ENST00000539332 SIRPDQ9H106 197 aa7.12□□□□□ -1.27
DDB1-213ENST00000539332 ZMAT4Q9H898 229 aa7.12□□□□□ -1.27
DDB1-213ENST00000539332 LPAR2Q9HBW0 351 aa7.12□□□□□ -1.27
DDB1-213ENST00000539332 AMMECR1Q9Y4X0 333 aaPredicted RBP7.12□□□□□ -1.27
DDB1-213ENST00000539332 TRAPPC1Q9Y5R8 145 aa7.12□□□□□ -1.27
DDB1-213ENST00000539332 AKAP9Q99996 3911 aa7.12□□□□□ -1.27
DDB1-213ENST00000539332 TRAV3A0A0B4J244 114 aa7.11□□□□□ -1.27
DDB1-213ENST00000539332 PMS2P5A8MQ11 134 aa7.11□□□□□ -1.27
DDB1-213ENST00000539332 ZNF705FA8MVS1 300 aaPredicted RBP7.11□□□□□ -1.27
DDB1-213ENST00000539332 RNF223E7ERA6 249 aa7.11□□□□□ -1.27
DDB1-213ENST00000539332 F6UZH7 168 aa7.11□□□□□ -1.27
DDB1-213ENST00000539332 ZNF705DP0CH99 300 aaPredicted RBP7.11□□□□□ -1.27
DDB1-213ENST00000539332 ZNF705BP0CI00 300 aaPredicted RBP7.11□□□□□ -1.27
DDB1-213ENST00000539332 VDAC2P45880 294 aaPredicted RBP7.11□□□□□ -1.27
DDB1-213ENST00000539332 RPL29P47914 159 aaKnown RBP7.11□□□□□ -1.27
DDB1-213ENST00000539332 FGF8P55075 233 aaPredicted RBP7.11□□□□□ -1.27
DDB1-213ENST00000539332 DLX1P56177 255 aa7.11□□□□□ -1.27
DDB1-213ENST00000539332 RPL15P61313 204 aaKnown RBP7.11□□□□□ -1.27
DDB1-213ENST00000539332 RPL19P84098 196 aaKnown RBP7.11□□□□□ -1.27
DDB1-213ENST00000539332 TMEM267Q0VDI3 215 aaPredicted RBP7.11□□□□□ -1.27
DDB1-213ENST00000539332 TMEM249Q2WGJ8 235 aa7.11□□□□□ -1.27
DDB1-213ENST00000539332 ZNF705AQ6ZN79 300 aaPredicted RBP7.11□□□□□ -1.27
DDB1-213ENST00000539332 TMEM144Q7Z5S9 345 aa7.11□□□□□ -1.27
DDB1-213ENST00000539332 VKORC1L1Q8N0U8 176 aa7.11□□□□□ -1.27
DDB1-213ENST00000539332 NECAP1Q8NC96 275 aa7.11□□□□□ -1.27
DDB1-213ENST00000539332 OR4C13Q8NGP0 309 aa7.11□□□□□ -1.27
DDB1-213ENST00000539332 OR4A16Q8NH70 328 aa7.11□□□□□ -1.27
DDB1-213ENST00000539332 CMTM2Q8TAZ6 248 aa7.11□□□□□ -1.27
DDB1-213ENST00000539332 RPUSD4Q96CM3 377 aaKnown RBP7.11□□□□□ -1.27
DDB1-213ENST00000539332 OR4C12Q96R67 309 aa7.11□□□□□ -1.27
DDB1-213ENST00000539332 FOXC2Q99958 501 aa7.11□□□□□ -1.27
DDB1-213ENST00000539332 ZNF257Q9Y2Q1 563 aa7.11□□□□□ -1.27
DDB1-213ENST00000539332 WASHC3Q9Y3C0 194 aa7.11□□□□□ -1.27
DDB1-213ENST00000539332 PXMP4Q9Y6I8 212 aa7.11□□□□□ -1.27
DDB1-213ENST00000539332 A0A1W2PPI3 338 aa7.1□□□□□ -1.27
DDB1-213ENST00000539332 B4DSR2 109 aa7.1□□□□□ -1.27
DDB1-213ENST00000539332 H3BP45 60 aa7.1□□□□□ -1.27
DDB1-213ENST00000539332 UPK2O00526 184 aa7.1□□□□□ -1.27
DDB1-213ENST00000539332 TGFAP01135 160 aa7.1□□□□□ -1.27
DDB1-213ENST00000539332 IGLV2-23P01705 113 aa7.1□□□□□ -1.27
DDB1-213ENST00000539332 MSMBP08118 114 aa7.1□□□□□ -1.27
DDB1-213ENST00000539332 SAA1P0DJI8 122 aaPredicted RBP7.1□□□□□ -1.27
DDB1-213ENST00000539332 MDKP21741 143 aaPredicted RBP7.1□□□□□ -1.27
DDB1-213ENST00000539332 MC5RP33032 325 aa7.1□□□□□ -1.27
DDB1-213ENST00000539332 ELLP55199 621 aaPredicted RBP7.1□□□□□ -1.27
DDB1-213ENST00000539332 YPEL3P61236 119 aaPredicted RBP7.1□□□□□ -1.27
DDB1-213ENST00000539332 RPS16P62249 146 aaKnown RBP7.1□□□□□ -1.27
DDB1-213ENST00000539332 SELENOTP62341 195 aa7.1□□□□□ -1.27
DDB1-213ENST00000539332 RPP30P78346 268 aaKnown RBP7.1□□□□□ -1.27
DDB1-213ENST00000539332 PRB3Q04118 309 aaPredicted RBP7.1□□□□□ -1.27
DDB1-213ENST00000539332 LOXL1Q08397 574 aaPredicted RBP7.1□□□□□ -1.27
DDB1-213ENST00000539332 ARL16Q0P5N6 197 aa7.1□□□□□ -1.27
DDB1-213ENST00000539332 LDLRAD2Q5SZI1 272 aa7.1□□□□□ -1.27
DDB1-213ENST00000539332 PNKDQ8N490 385 aa7.1□□□□□ -1.27
DDB1-213ENST00000539332 WFDC11Q8NEX6 87 aa7.1□□□□□ -1.27
DDB1-213ENST00000539332 OR4A5Q8NH83 315 aa7.1□□□□□ -1.27
DDB1-213ENST00000539332 TBX15Q96SF7 602 aa7.1□□□□□ -1.27
DDB1-213ENST00000539332 PRNDQ9UKY0 176 aa7.1□□□□□ -1.27
DDB1-213ENST00000539332 TCF19Q9Y242 345 aa7.1□□□□□ -1.27
DDB1-213ENST00000539332 ZFP30Q9Y2G7 519 aa7.1□□□□□ -1.27
DDB1-213ENST00000539332 IGHV1-3A0A0C4DH29 117 aa7.1□□□□□ -1.27
DDB1-213ENST00000539332 C15orf62A8K5M9 175 aa7.1□□□□□ -1.27
DDB1-213ENST00000539332 C17orf112F2Z3M2 114 aa7.1□□□□□ -1.27
DDB1-213ENST00000539332 BRS3P32247 399 aa7.1□□□□□ -1.27
DDB1-213ENST00000539332 REG1BP48304 166 aa7.1□□□□□ -1.27
DDB1-213ENST00000539332 HSPE1P61604 102 aaKnown RBP7.1□□□□□ -1.27
DDB1-213ENST00000539332 SLC38A11Q08AI6 406 aa7.1□□□□□ -1.27
DDB1-213ENST00000539332 MAPK1IP1LQ8NDC0 245 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms