RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 ELLP55199 621 aaPredicted RBP12.05□□□□□ -0.48
VAMP1-207ENST00000539047 ACOT6Q3I5F7 207 aaPredicted RBP12.05□□□□□ -0.48
VAMP1-207ENST00000539047 FFAR4Q5NUL3 377 aa12.05□□□□□ -0.48
VAMP1-207ENST00000539047 CYP2G1PQ6ZSU1 146 aa12.05□□□□□ -0.48
VAMP1-207ENST00000539047 TRGV9Q99603 122 aa12.05□□□□□ -0.48
VAMP1-207ENST00000539047 MGST2Q99735 147 aa12.05□□□□□ -0.48
VAMP1-207ENST00000539047 SONP18583 2426 aaKnown RBP12.05□□□□□ -0.48
VAMP1-207ENST00000539047 FN1P02751 2386 aaKnown RBP12.04□□□□□ -0.48
VAMP1-207ENST00000539047 IGLV1-40P01703 118 aa12.04□□□□□ -0.48
VAMP1-207ENST00000539047 ELANEP08246 267 aa12.04□□□□□ -0.48
VAMP1-207ENST00000539047 MDKP21741 143 aaPredicted RBP12.04□□□□□ -0.48
VAMP1-207ENST00000539047 RPL29P47914 159 aaKnown RBP12.04□□□□□ -0.48
VAMP1-207ENST00000539047 B2MP61769 119 aa12.04□□□□□ -0.48
VAMP1-207ENST00000539047 CFHR3Q02985 330 aa12.04□□□□□ -0.48
VAMP1-207ENST00000539047 FOXE3Q13461 319 aa12.04□□□□□ -0.48
VAMP1-207ENST00000539047 MLANAQ16655 118 aa12.04□□□□□ -0.48
VAMP1-207ENST00000539047 DPPA3Q6W0C5 159 aa12.04□□□□□ -0.48
VAMP1-207ENST00000539047 Q6ZRG5 221 aa12.04□□□□□ -0.48
VAMP1-207ENST00000539047 Q6ZSV7 163 aa12.04□□□□□ -0.48
VAMP1-207ENST00000539047 BPIFCQ8NFQ6 507 aa12.04□□□□□ -0.48
VAMP1-207ENST00000539047 ATP6V0BQ99437 205 aa12.04□□□□□ -0.48
VAMP1-207ENST00000539047 PXMP4Q9Y6I8 212 aa12.04□□□□□ -0.48
VAMP1-207ENST00000539047 MFSD2BA6NFX1 497 aa12.03□□□□□ -0.48
VAMP1-207ENST00000539047 NUPL2O15504 423 aaKnown RBP12.03□□□□□ -0.48
VAMP1-207ENST00000539047 FCGR2BP31994 310 aaPredicted RBP12.03□□□□□ -0.48
VAMP1-207ENST00000539047 SULT1A2P50226 295 aa12.03□□□□□ -0.48
VAMP1-207ENST00000539047 TMEM41BQ5BJD5 291 aa12.03□□□□□ -0.48
VAMP1-207ENST00000539047 FAM74A1Q5RGS3 127 aa12.03□□□□□ -0.48
VAMP1-207ENST00000539047 OR4X2Q8NGF9 303 aa12.03□□□□□ -0.48
VAMP1-207ENST00000539047 OR4F5Q8NH21 305 aa12.03□□□□□ -0.48
VAMP1-207ENST00000539047 DNHD1Q96M86 4753 aa12.02□□□□□ -0.49
VAMP1-207ENST00000539047 ZNF705EA8MWA4 302 aaPredicted RBP12.02□□□□□ -0.49
VAMP1-207ENST00000539047 TEX46H3BTG2 121 aa12.02□□□□□ -0.49
VAMP1-207ENST00000539047 NDUFA7O95182 113 aa12.02□□□□□ -0.49
VAMP1-207ENST00000539047 RAB2AP61019 212 aa12.02□□□□□ -0.49
VAMP1-207ENST00000539047 BLOC1S1P78537 153 aa12.02□□□□□ -0.49
VAMP1-207ENST00000539047 DEFA5Q01523 94 aa12.02□□□□□ -0.49
VAMP1-207ENST00000539047 ZNF616Q08AN1 781 aa12.02□□□□□ -0.49
VAMP1-207ENST00000539047 S100A7AQ86SG5 101 aa12.02□□□□□ -0.49
VAMP1-207ENST00000539047 ZNF329Q86UD4 541 aa12.02□□□□□ -0.49
VAMP1-207ENST00000539047 STPG3Q8N7X2 389 aa12.02□□□□□ -0.49
VAMP1-207ENST00000539047 ZNF502Q8TBZ5 544 aa12.02□□□□□ -0.49
VAMP1-207ENST00000539047 C16orf95Q9H693 158 aa12.02□□□□□ -0.49
VAMP1-207ENST00000539047 SERTAD4Q9NUC0 356 aa12.02□□□□□ -0.49
VAMP1-207ENST00000539047 SLC39A9Q9NUM3 307 aa12.02□□□□□ -0.49
VAMP1-207ENST00000539047 S4R3C0 116 aa12.02□□□□□ -0.49
VAMP1-207ENST00000539047 IGHV3-23P01764 117 aa12.01□□□□□ -0.49
VAMP1-207ENST00000539047 LINC00869P0C866 280 aa12.01□□□□□ -0.49
VAMP1-207ENST00000539047 IGLC1P0CG04 106 aa12.01□□□□□ -0.49
VAMP1-207ENST00000539047 M6PRP20645 277 aa12.01□□□□□ -0.49
VAMP1-207ENST00000539047 S100A7P31151 101 aa12.01□□□□□ -0.49
VAMP1-207ENST00000539047 GPR183P32249 361 aa12.01□□□□□ -0.49
VAMP1-207ENST00000539047 RAB9AP51151 201 aa12.01□□□□□ -0.49
VAMP1-207ENST00000539047 PXDC1Q5TGL8 231 aa12.01□□□□□ -0.49
VAMP1-207ENST00000539047 MIC13Q5XKP0 118 aa12.01□□□□□ -0.49
VAMP1-207ENST00000539047 SPSB3Q6PJ21 355 aa12.01□□□□□ -0.49
VAMP1-207ENST00000539047 OR1L4Q8NGR5 311 aa12.01□□□□□ -0.49
VAMP1-207ENST00000539047 FAM213BQ8TBF2 198 aa12.01□□□□□ -0.49
VAMP1-207ENST00000539047 SAT2Q96F10 170 aaPredicted RBP12.01□□□□□ -0.49
VAMP1-207ENST00000539047 PFDN5Q99471 154 aa12.01□□□□□ -0.49
VAMP1-207ENST00000539047 GNB4Q9HAV0 340 aa12.01□□□□□ -0.49
VAMP1-207ENST00000539047 MRPL36Q9P0J6 103 aaKnown RBP12.01□□□□□ -0.49
VAMP1-207ENST00000539047 SLC45A2Q9UMX9 530 aa12.01□□□□□ -0.49
VAMP1-207ENST00000539047 IGKV1OR2-108A0A075B7D4 117 aa12□□□□□ -0.49
VAMP1-207ENST00000539047 A0A1W2PPV4 95 aa12□□□□□ -0.49
VAMP1-207ENST00000539047 OR2T8A6NH00 312 aa12□□□□□ -0.49
VAMP1-207ENST00000539047 COX7A2P2O60397 106 aa12□□□□□ -0.49
VAMP1-207ENST00000539047 PSMB8P28062 276 aa12□□□□□ -0.49
VAMP1-207ENST00000539047 YPEL3P61236 119 aaPredicted RBP12□□□□□ -0.49
VAMP1-207ENST00000539047 RELQ04864 619 aaPredicted RBP12□□□□□ -0.49
VAMP1-207ENST00000539047 TIGITQ495A1 244 aa12□□□□□ -0.49
VAMP1-207ENST00000539047 KLHDC1Q8N7A1 406 aa12□□□□□ -0.49
VAMP1-207ENST00000539047 OR10G4Q8NGN3 311 aa12□□□□□ -0.49
VAMP1-207ENST00000539047 OR10G9Q8NGN4 311 aa12□□□□□ -0.49
VAMP1-207ENST00000539047 OR10G7Q8NGN6 311 aa12□□□□□ -0.49
VAMP1-207ENST00000539047 Q8WTZ3 238 aa12□□□□□ -0.49
VAMP1-207ENST00000539047 RNF2Q99496 336 aa12□□□□□ -0.49
VAMP1-207ENST00000539047 C19orf24Q9BVV8 132 aa12□□□□□ -0.49
VAMP1-207ENST00000539047 ACTR3CQ9C0K3 210 aaPredicted RBP12□□□□□ -0.49
VAMP1-207ENST00000539047 TOMM40O96008 361 aa11.99□□□□□ -0.49
VAMP1-207ENST00000539047 RD3LP0DJH9 198 aa11.99□□□□□ -0.49
VAMP1-207ENST00000539047 RHOBP62745 196 aa11.99□□□□□ -0.49
VAMP1-207ENST00000539047 PRR20EP86478 221 aa11.99□□□□□ -0.49
VAMP1-207ENST00000539047 PRR20CP86479 221 aa11.99□□□□□ -0.49
VAMP1-207ENST00000539047 PRR20DP86480 221 aa11.99□□□□□ -0.49
VAMP1-207ENST00000539047 PRR20BP86481 221 aa11.99□□□□□ -0.49
VAMP1-207ENST00000539047 PRR20AP86496 221 aa11.99□□□□□ -0.49
VAMP1-207ENST00000539047 CLEC19AQ6UXS0 136 aa11.99□□□□□ -0.49
VAMP1-207ENST00000539047 IGKV1D-37A0A075B6S9 117 aa11.98□□□□□ -0.49
VAMP1-207ENST00000539047 TGOLN2O43493 480 aa11.98□□□□□ -0.49
VAMP1-207ENST00000539047 HBE1P02100 147 aa11.98□□□□□ -0.49
VAMP1-207ENST00000539047 ARL3P36405 182 aa11.98□□□□□ -0.49
VAMP1-207ENST00000539047 ZNF90Q03938 601 aa11.98□□□□□ -0.49
VAMP1-207ENST00000539047 KHDC1LQ5JSQ8 128 aa11.98□□□□□ -0.49
VAMP1-207ENST00000539047 CLLU1Q5K131 121 aa11.98□□□□□ -0.49
VAMP1-207ENST00000539047 FAM122CQ6P4D5 195 aa11.98□□□□□ -0.49
VAMP1-207ENST00000539047 ZNF600Q6ZNG1 722 aa11.98□□□□□ -0.49
VAMP1-207ENST00000539047 OR5AU1Q8NGC0 362 aa11.98□□□□□ -0.49
VAMP1-207ENST00000539047 OR51G1Q8NGK1 321 aa11.98□□□□□ -0.49
VAMP1-207ENST00000539047 CCDC140Q96MF4 163 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms