RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 HYLS1Q96M11 299 aa18.11■□□□□ 0.49
TMEM260-202ENST00000538838 ATP6V0BQ99437 205 aa18.11■□□□□ 0.49
TMEM260-202ENST00000538838 CHRDL1Q9BU40 450 aa18.11■□□□□ 0.49
TMEM260-202ENST00000538838 IGKV1OR2-108A0A075B7D4 117 aa18.1■□□□□ 0.49
TMEM260-202ENST00000538838 BMPR1BO00238 502 aa18.1■□□□□ 0.49
TMEM260-202ENST00000538838 ADMP35318 185 aa18.1■□□□□ 0.49
TMEM260-202ENST00000538838 ATP6V1FQ16864 119 aa18.1■□□□□ 0.49
TMEM260-202ENST00000538838 GAR1Q9NY12 217 aaKnown RBP18.1■□□□□ 0.49
TMEM260-202ENST00000538838 CTSGP08311 255 aa18.09■□□□□ 0.49
TMEM260-202ENST00000538838 IGLC1P0CG04 106 aa18.09■□□□□ 0.49
TMEM260-202ENST00000538838 OR10J1P30954 320 aa18.09■□□□□ 0.49
TMEM260-202ENST00000538838 ZNF345Q14585 488 aa18.09■□□□□ 0.49
TMEM260-202ENST00000538838 FAM209BQ5JX69 171 aa18.09■□□□□ 0.49
TMEM260-202ENST00000538838 TREML4Q6UXN2 200 aa18.09■□□□□ 0.49
TMEM260-202ENST00000538838 TMEM144Q7Z5S9 345 aa18.09■□□□□ 0.49
TMEM260-202ENST00000538838 RAX2Q96IS3 184 aa18.09■□□□□ 0.49
TMEM260-202ENST00000538838 ATP5SQ99766 215 aa18.09■□□□□ 0.49
TMEM260-202ENST00000538838 WFDC1Q9HC57 220 aa18.09■□□□□ 0.49
TMEM260-202ENST00000538838 NPVFQ9HCQ7 196 aa18.09■□□□□ 0.49
TMEM260-202ENST00000538838 IGKV1D-37A0A075B6S9 117 aa18.09■□□□□ 0.49
TMEM260-202ENST00000538838 ZFP92A6NM28 416 aa18.09■□□□□ 0.49
TMEM260-202ENST00000538838 OR2F1Q13607 317 aa18.09■□□□□ 0.49
TMEM260-202ENST00000538838 TIGITQ495A1 244 aa18.09■□□□□ 0.49
TMEM260-202ENST00000538838 THAP8Q8NA92 274 aa18.09■□□□□ 0.49
TMEM260-202ENST00000538838 OR11H1Q8NG94 326 aa18.09■□□□□ 0.49
TMEM260-202ENST00000538838 IGHV3-35A0A0C4DH35 117 aa18.08■□□□□ 0.48
TMEM260-202ENST00000538838 NUPL2O15504 423 aaKnown RBP18.08■□□□□ 0.48
TMEM260-202ENST00000538838 HSPB1P04792 205 aaKnown RBP18.08■□□□□ 0.48
TMEM260-202ENST00000538838 SHISA2Q6UWI4 295 aa18.08■□□□□ 0.48
TMEM260-202ENST00000538838 KCNRGQ8N5I3 272 aa18.08■□□□□ 0.48
TMEM260-202ENST00000538838 IGKV1-17P01599 117 aa18.07■□□□□ 0.48
TMEM260-202ENST00000538838 NKX2-5P52952 324 aaPredicted RBP18.07■□□□□ 0.48
TMEM260-202ENST00000538838 SPSB3Q6PJ21 355 aa18.07■□□□□ 0.48
TMEM260-202ENST00000538838 OR1N2Q8NGR9 330 aa18.07■□□□□ 0.48
TMEM260-202ENST00000538838 WDR83OSQ9Y284 106 aa18.07■□□□□ 0.48
TMEM260-202ENST00000538838 DFFBO76075 338 aa18.06■□□□□ 0.48
TMEM260-202ENST00000538838 ZNF616Q08AN1 781 aa18.06■□□□□ 0.48
TMEM260-202ENST00000538838 TEPPQ6URK8 271 aa18.06■□□□□ 0.48
TMEM260-202ENST00000538838 ZNF414Q96IQ9 312 aa18.06■□□□□ 0.48
TMEM260-202ENST00000538838 LSM4Q9Y4Z0 139 aaKnown RBP18.06■□□□□ 0.48
TMEM260-202ENST00000538838 TRAV30A0A087WSZ9 112 aa18.05■□□□□ 0.48
TMEM260-202ENST00000538838 LINC01619G3V211 115 aa18.05■□□□□ 0.48
TMEM260-202ENST00000538838 BOLA2-SMG1P6H3BVE0 249 aa18.05■□□□□ 0.48
TMEM260-202ENST00000538838 GGCTO75223 188 aaKnown RBP18.05■□□□□ 0.48
TMEM260-202ENST00000538838 OR2C1O95371 312 aa18.05■□□□□ 0.48
TMEM260-202ENST00000538838 ZNF90Q03938 601 aa18.05■□□□□ 0.48
TMEM260-202ENST00000538838 LGALSLQ3ZCW2 172 aaPredicted RBP18.05■□□□□ 0.48
TMEM260-202ENST00000538838 DPF1Q92782 380 aa18.05■□□□□ 0.48
TMEM260-202ENST00000538838 CCL24O00175 119 aa18.05■□□□□ 0.48
TMEM260-202ENST00000538838 SCGB2A1O75556 95 aa18.05■□□□□ 0.48
TMEM260-202ENST00000538838 FGF7P21781 194 aa18.05■□□□□ 0.48
TMEM260-202ENST00000538838 SLURP1P55000 103 aa18.05■□□□□ 0.48
TMEM260-202ENST00000538838 FHL3Q13643 280 aa18.05■□□□□ 0.48
TMEM260-202ENST00000538838 TRGV9Q99603 122 aa18.05■□□□□ 0.48
TMEM260-202ENST00000538838 ARL6Q9H0F7 186 aa18.05■□□□□ 0.48
TMEM260-202ENST00000538838 A0A0D9SG52 128 aa18.04■□□□□ 0.48
TMEM260-202ENST00000538838 HOXD3P31249 432 aaPredicted RBP18.04■□□□□ 0.48
TMEM260-202ENST00000538838 RPEL1Q2QD12 228 aa18.04■□□□□ 0.48
TMEM260-202ENST00000538838 BTNL8Q6UX41 500 aa18.04■□□□□ 0.48
TMEM260-202ENST00000538838 C9orf62Q8N4C0 152 aa18.04■□□□□ 0.48
TMEM260-202ENST00000538838 MGST2Q99735 147 aa18.04■□□□□ 0.48
TMEM260-202ENST00000538838 TMUB2Q71RG4 321 aa18.03■□□□□ 0.48
TMEM260-202ENST00000538838 WDR61Q9GZS3 305 aaKnown RBP18.03■□□□□ 0.48
TMEM260-202ENST00000538838 AGPAT2O15120 278 aa18.02■□□□□ 0.48
TMEM260-202ENST00000538838 IFNA5P01569 189 aa18.02■□□□□ 0.48
TMEM260-202ENST00000538838 ZP3P21754 424 aa18.02■□□□□ 0.48
TMEM260-202ENST00000538838 RPL7L1Q6DKI1 246 aaKnown RBP18.02■□□□□ 0.48
TMEM260-202ENST00000538838 ARPC5LQ9BPX5 153 aa18.02■□□□□ 0.48
TMEM260-202ENST00000538838 VWFP04275 2813 aa18.02■□□□□ 0.48
TMEM260-202ENST00000538838 WNK1Q9H4A3 2382 aa18.02■□□□□ 0.47
TMEM260-202ENST00000538838 BCL2L11O43521 198 aa18.01■□□□□ 0.47
TMEM260-202ENST00000538838 YPEL3P61236 119 aaPredicted RBP18.01■□□□□ 0.47
TMEM260-202ENST00000538838 RELQ04864 619 aaPredicted RBP18.01■□□□□ 0.47
TMEM260-202ENST00000538838 ZNF266Q14584 549 aa18.01■□□□□ 0.47
TMEM260-202ENST00000538838 KRTAP21-3Q3LHN1 58 aa18.01■□□□□ 0.47
TMEM260-202ENST00000538838 LAMTOR1Q6IAA8 161 aa18.01■□□□□ 0.47
TMEM260-202ENST00000538838 ZNF600Q6ZNG1 722 aa18.01■□□□□ 0.47
TMEM260-202ENST00000538838 CYP2G1PQ6ZSU1 146 aa18.01■□□□□ 0.47
TMEM260-202ENST00000538838 ANK2Q01484 3957 aa18.01■□□□□ 0.47
TMEM260-202ENST00000538838 KANTRA0A1W2PQU2 76 aa18.01■□□□□ 0.47
TMEM260-202ENST00000538838 TOMM40O96008 361 aa18.01■□□□□ 0.47
TMEM260-202ENST00000538838 GATA2P23769 480 aaPredicted RBP18.01■□□□□ 0.47
TMEM260-202ENST00000538838 TMEM182Q6ZP80 229 aaPredicted RBP18.01■□□□□ 0.47
TMEM260-202ENST00000538838 OR4F17Q8NGA8 305 aa18.01■□□□□ 0.47
TMEM260-202ENST00000538838 OR4F4Q96R69 305 aa18.01■□□□□ 0.47
TMEM260-202ENST00000538838 GGTLC1Q9BX51 225 aa18.01■□□□□ 0.47
TMEM260-202ENST00000538838 NPCDR1Q9BY65 106 aa18.01■□□□□ 0.47
TMEM260-202ENST00000538838 CYTL1Q9NRR1 136 aa18.01■□□□□ 0.47
TMEM260-202ENST00000538838 PUS1Q9Y606 427 aaKnown RBP eCLIP18.01■□□□□ 0.47
TMEM260-202ENST00000538838 IGHV3OR16-8A0A075B7F1 116 aa18■□□□□ 0.47
TMEM260-202ENST00000538838 TAAR5O14804 337 aa18■□□□□ 0.47
TMEM260-202ENST00000538838 MPDU1O75352 247 aa18■□□□□ 0.47
TMEM260-202ENST00000538838 TSPAN15O95858 294 aa18■□□□□ 0.47
TMEM260-202ENST00000538838 PSG1P11464 419 aa18■□□□□ 0.47
TMEM260-202ENST00000538838 MYCNOSP40205 109 aa18■□□□□ 0.47
TMEM260-202ENST00000538838 CAMLGP49069 296 aa18■□□□□ 0.47
TMEM260-202ENST00000538838 UNQ9165/PRO28630Q6UXU0 137 aa18■□□□□ 0.47
TMEM260-202ENST00000538838 RCC1LQ96I51 464 aaKnown RBP18■□□□□ 0.47
TMEM260-202ENST00000538838 PF4P02776 101 aa17.99■□□□□ 0.47
TMEM260-202ENST00000538838 RD3LP0DJH9 198 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms