RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 CD74P04233 296 aa10.02□□□□□ -0.81
SMARCA4-206ENST00000538456 HLA-DMAP28067 261 aa10.02□□□□□ -0.81
SMARCA4-206ENST00000538456 SOHLH1Q5JUK2 328 aa10.02□□□□□ -0.81
SMARCA4-206ENST00000538456 UBE2NLQ5JXB2 153 aa10.02□□□□□ -0.81
SMARCA4-206ENST00000538456 Q6ZRM9 215 aa10.02□□□□□ -0.81
SMARCA4-206ENST00000538456 SLC35G3Q8N808 338 aa10.02□□□□□ -0.81
SMARCA4-206ENST00000538456 SAMD12Q8N8I0 201 aa10.02□□□□□ -0.81
SMARCA4-206ENST00000538456 DIRAS2Q96HU8 199 aa10.02□□□□□ -0.81
SMARCA4-206ENST00000538456 ANAPC10Q9UM13 185 aa10.02□□□□□ -0.81
SMARCA4-206ENST00000538456 CLN5O75503 358 aa10.01□□□□□ -0.81
SMARCA4-206ENST00000538456 ELK1P19419 428 aa10.01□□□□□ -0.81
SMARCA4-206ENST00000538456 OPRK1P41145 380 aa10.01□□□□□ -0.81
SMARCA4-206ENST00000538456 NUTF2P61970 127 aaKnown RBP10.01□□□□□ -0.81
SMARCA4-206ENST00000538456 MLANAQ16655 118 aa10.01□□□□□ -0.81
SMARCA4-206ENST00000538456 TIGITQ495A1 244 aa10.01□□□□□ -0.81
SMARCA4-206ENST00000538456 TMEM69Q5SWH9 247 aa10.01□□□□□ -0.81
SMARCA4-206ENST00000538456 S100A16Q96FQ6 103 aaKnown RBP10.01□□□□□ -0.81
SMARCA4-206ENST00000538456 SOSTQ9BQB4 213 aa10.01□□□□□ -0.81
SMARCA4-206ENST00000538456 C1QTNF4Q9BXJ3 329 aa10.01□□□□□ -0.81
SMARCA4-206ENST00000538456 FNDC4Q9H6D8 234 aaPredicted RBP10.01□□□□□ -0.81
SMARCA4-206ENST00000538456 FAM212BQ9NTI7 297 aaPredicted RBP10.01□□□□□ -0.81
SMARCA4-206ENST00000538456 FABP12A6NFH5 140 aa10□□□□□ -0.81
SMARCA4-206ENST00000538456 FAM25AB3EWG3 89 aa10□□□□□ -0.81
SMARCA4-206ENST00000538456 FAM25CB3EWG5 89 aa10□□□□□ -0.81
SMARCA4-206ENST00000538456 FAM25GB3EWG6 89 aa10□□□□□ -0.81
SMARCA4-206ENST00000538456 CORTO00230 105 aa10□□□□□ -0.81
SMARCA4-206ENST00000538456 SCGB2A1O75556 95 aa10□□□□□ -0.81
SMARCA4-206ENST00000538456 SPART-AS1P0CW21 52 aa10□□□□□ -0.81
SMARCA4-206ENST00000538456 RNASE2P10153 161 aaKnown RBP10□□□□□ -0.81
SMARCA4-206ENST00000538456 NAT1P18440 290 aa10□□□□□ -0.81
SMARCA4-206ENST00000538456 HOXA1P49639 335 aaPredicted RBP10□□□□□ -0.81
SMARCA4-206ENST00000538456 EIF2B2P49770 351 aaKnown RBP10□□□□□ -0.81
SMARCA4-206ENST00000538456 TAS2R20P59543 309 aa10□□□□□ -0.81
SMARCA4-206ENST00000538456 TSPAN5P62079 268 aa10□□□□□ -0.81
SMARCA4-206ENST00000538456 C1orf134Q5TEV5 83 aa10□□□□□ -0.81
SMARCA4-206ENST00000538456 LYSMD2Q8IV50 215 aa10□□□□□ -0.81
SMARCA4-206ENST00000538456 CCDC32Q9BV29 185 aa10□□□□□ -0.81
SMARCA4-206ENST00000538456 RABL2AQ9UBK7 228 aaPredicted RBP10□□□□□ -0.81
SMARCA4-206ENST00000538456 EXTL2Q9UBQ6 330 aa10□□□□□ -0.81
SMARCA4-206ENST00000538456 RABL2BQ9UNT1 228 aa10□□□□□ -0.81
SMARCA4-206ENST00000538456 IGHV3OR16-12A0A075B7B8 117 aa9.99□□□□□ -0.81
SMARCA4-206ENST00000538456 FAM90A26D6RGX4 464 aa9.99□□□□□ -0.81
SMARCA4-206ENST00000538456 IGKV1-17P01599 117 aa9.99□□□□□ -0.81
SMARCA4-206ENST00000538456 HTN3P15516 51 aa9.99□□□□□ -0.81
SMARCA4-206ENST00000538456 SUB1P53999 127 aaKnown RBP eCLIP9.99□□□□□ -0.81
SMARCA4-206ENST00000538456 SNRPD3P62318 126 aaKnown RBP9.99□□□□□ -0.81
SMARCA4-206ENST00000538456 ZNF79Q15937 498 aa9.99□□□□□ -0.81
SMARCA4-206ENST00000538456 LPCAT3Q6P1A2 487 aa9.99□□□□□ -0.81
SMARCA4-206ENST00000538456 OR4X1Q8NH49 305 aa9.99□□□□□ -0.81
SMARCA4-206ENST00000538456 GLMPQ8WWB7 406 aa9.99□□□□□ -0.81
SMARCA4-206ENST00000538456 SRRQ9GZT4 340 aa9.99□□□□□ -0.81
SMARCA4-206ENST00000538456 A0A0B4J293 547 aa9.98□□□□□ -0.81
SMARCA4-206ENST00000538456 C16orf90A8MZG2 172 aa9.98□□□□□ -0.81
SMARCA4-206ENST00000538456 H3BMM0 161 aa9.98□□□□□ -0.81
SMARCA4-206ENST00000538456 UPK1BO75841 260 aa9.98□□□□□ -0.81
SMARCA4-206ENST00000538456 IGKV1-5P01602 117 aa9.98□□□□□ -0.81
SMARCA4-206ENST00000538456 IGKV3-20P01619 116 aa9.98□□□□□ -0.81
SMARCA4-206ENST00000538456 PRSS3P35030 304 aa9.98□□□□□ -0.81
SMARCA4-206ENST00000538456 AKR1C2P52895 323 aa9.98□□□□□ -0.81
SMARCA4-206ENST00000538456 MAPKAPK5-AS1Q8N8E1 139 aa9.98□□□□□ -0.81
SMARCA4-206ENST00000538456 SDHCQ99643 169 aaPredicted RBP9.98□□□□□ -0.81
SMARCA4-206ENST00000538456 PDCD10Q9BUL8 212 aa9.98□□□□□ -0.81
SMARCA4-206ENST00000538456 INS-IGF2F8WCM5 200 aa9.97□□□□□ -0.81
SMARCA4-206ENST00000538456 FXYD7P58549 80 aa9.97□□□□□ -0.81
SMARCA4-206ENST00000538456 IL18Q14116 193 aa9.97□□□□□ -0.81
SMARCA4-206ENST00000538456 FAM222AQ5U5X8 452 aa9.97□□□□□ -0.81
SMARCA4-206ENST00000538456 C16orf54Q6UWD8 224 aa9.97□□□□□ -0.81
SMARCA4-206ENST00000538456 ZNF705AQ6ZN79 300 aaPredicted RBP9.97□□□□□ -0.81
SMARCA4-206ENST00000538456 ENY2Q9NPA8 101 aa9.97□□□□□ -0.81
SMARCA4-206ENST00000538456 U3KQE9 123 aa9.97□□□□□ -0.81
SMARCA4-206ENST00000538456 TMEM189A5PLL7 270 aa9.96□□□□□ -0.82
SMARCA4-206ENST00000538456 ZNF705FA8MVS1 300 aaPredicted RBP9.96□□□□□ -0.82
SMARCA4-206ENST00000538456 HNRNPCP07910 306 aaKnown RBP eCLIP9.96□□□□□ -0.82
SMARCA4-206ENST00000538456 ZNF705DP0CH99 300 aaPredicted RBP9.96□□□□□ -0.82
SMARCA4-206ENST00000538456 ZNF705BP0CI00 300 aaPredicted RBP9.96□□□□□ -0.82
SMARCA4-206ENST00000538456 PGAM2P15259 253 aa9.96□□□□□ -0.82
SMARCA4-206ENST00000538456 PI3P19957 117 aa9.96□□□□□ -0.82
SMARCA4-206ENST00000538456 AP2S1P53680 142 aaPredicted RBP9.96□□□□□ -0.82
SMARCA4-206ENST00000538456 DEFB1P60022 68 aa9.96□□□□□ -0.82
SMARCA4-206ENST00000538456 RNF212Q495C1 297 aa9.96□□□□□ -0.82
SMARCA4-206ENST00000538456 PYDC2Q56P42 97 aa9.96□□□□□ -0.82
SMARCA4-206ENST00000538456 C15orf40Q8WUR7 153 aa9.96□□□□□ -0.82
SMARCA4-206ENST00000538456 FAM210BQ96KR6 192 aa9.96□□□□□ -0.82
SMARCA4-206ENST00000538456 NEU1Q99519 415 aa9.96□□□□□ -0.82
SMARCA4-206ENST00000538456 NIPSNAP3BQ9BS92 247 aa9.96□□□□□ -0.82
SMARCA4-206ENST00000538456 NRN1Q9NPD7 142 aa9.96□□□□□ -0.82
SMARCA4-206ENST00000538456 DKK2Q9UBU2 259 aa9.96□□□□□ -0.82
SMARCA4-206ENST00000538456 RFNGQ9Y644 331 aa9.96□□□□□ -0.82
SMARCA4-206ENST00000538456 TRAV30A0A087WSZ9 112 aa9.95□□□□□ -0.82
SMARCA4-206ENST00000538456 CTDSPLO15194 276 aa9.95□□□□□ -0.82
SMARCA4-206ENST00000538456 P0C879 139 aa9.95□□□□□ -0.82
SMARCA4-206ENST00000538456 HLA-DRB4P13762 266 aa9.95□□□□□ -0.82
SMARCA4-206ENST00000538456 RND2P52198 227 aa9.95□□□□□ -0.82
SMARCA4-206ENST00000538456 UCP3P55916 312 aa9.95□□□□□ -0.82
SMARCA4-206ENST00000538456 IFITM3Q01628 133 aa9.95□□□□□ -0.82
SMARCA4-206ENST00000538456 DHODHQ02127 395 aa9.95□□□□□ -0.82
SMARCA4-206ENST00000538456 TNP2Q05952 138 aa9.95□□□□□ -0.82
SMARCA4-206ENST00000538456 USF2Q15853 346 aaPredicted RBP9.95□□□□□ -0.82
SMARCA4-206ENST00000538456 GDF5OSQ5U4N7 250 aa9.95□□□□□ -0.82
SMARCA4-206ENST00000538456 SIGLEC15Q6ZMC9 328 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms