RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 SMCO3A2RU48 225 aa18.66■□□□□ 0.58
HMGA2-208ENST00000537429 BMPR1BO00238 502 aa18.66■□□□□ 0.58
HMGA2-208ENST00000537429 IGLC1P0CG04 106 aa18.66■□□□□ 0.58
HMGA2-208ENST00000537429 ADMP35318 185 aa18.66■□□□□ 0.58
HMGA2-208ENST00000537429 ARL3P36405 182 aa18.66■□□□□ 0.58
HMGA2-208ENST00000537429 AP2S1P53680 142 aaPredicted RBP18.66■□□□□ 0.58
HMGA2-208ENST00000537429 SPSB3Q6PJ21 355 aa18.66■□□□□ 0.58
HMGA2-208ENST00000537429 OR11H1Q8NG94 326 aa18.66■□□□□ 0.58
HMGA2-208ENST00000537429 DUX3Q96PT4 197 aa18.66■□□□□ 0.58
HMGA2-208ENST00000537429 CHRDL1Q9BU40 450 aa18.66■□□□□ 0.58
HMGA2-208ENST00000537429 UQCC1Q9NVA1 299 aa18.66■□□□□ 0.58
HMGA2-208ENST00000537429 TRAV30A0A087WSZ9 112 aa18.65■□□□□ 0.58
HMGA2-208ENST00000537429 AKR1C1Q04828 323 aa18.65■□□□□ 0.58
HMGA2-208ENST00000537429 CLINT1Q14677 625 aa18.65■□□□□ 0.58
HMGA2-208ENST00000537429 ZFP69Q49AA0 526 aa18.65■□□□□ 0.58
HMGA2-208ENST00000537429 TREML4Q6UXN2 200 aa18.65■□□□□ 0.58
HMGA2-208ENST00000537429 THAP8Q8NA92 274 aa18.65■□□□□ 0.58
HMGA2-208ENST00000537429 DPF1Q92782 380 aa18.65■□□□□ 0.58
HMGA2-208ENST00000537429 RAX2Q96IS3 184 aa18.65■□□□□ 0.58
HMGA2-208ENST00000537429 SMIM3Q9BZL3 60 aa18.65■□□□□ 0.58
HMGA2-208ENST00000537429 IGKV1D-37A0A075B6S9 117 aa18.64■□□□□ 0.58
HMGA2-208ENST00000537429 NUPL2O15504 423 aaKnown RBP18.64■□□□□ 0.58
HMGA2-208ENST00000537429 OR10J1P30954 320 aa18.64■□□□□ 0.58
HMGA2-208ENST00000537429 OR2F1Q13607 317 aa18.64■□□□□ 0.58
HMGA2-208ENST00000537429 ZNF345Q14585 488 aa18.64■□□□□ 0.58
HMGA2-208ENST00000537429 OR1N2Q8NGR9 330 aa18.64■□□□□ 0.58
HMGA2-208ENST00000537429 FBXL17Q9UF56 701 aa18.64■□□□□ 0.58
HMGA2-208ENST00000537429 CCL24O00175 119 aa18.64■□□□□ 0.57
HMGA2-208ENST00000537429 GGCTO75223 188 aaKnown RBP18.64■□□□□ 0.57
HMGA2-208ENST00000537429 IGKV1-17P01599 117 aa18.64■□□□□ 0.57
HMGA2-208ENST00000537429 CXCL2P19875 107 aa18.64■□□□□ 0.57
HMGA2-208ENST00000537429 ZNF616Q08AN1 781 aa18.64■□□□□ 0.57
HMGA2-208ENST00000537429 ATP5SQ99766 215 aa18.64■□□□□ 0.57
HMGA2-208ENST00000537429 LSM4Q9Y4Z0 139 aaKnown RBP18.64■□□□□ 0.57
HMGA2-208ENST00000537429 ZFP92A6NM28 416 aa18.63■□□□□ 0.57
HMGA2-208ENST00000537429 LINC01619G3V211 115 aa18.63■□□□□ 0.57
HMGA2-208ENST00000537429 DFFBO76075 338 aa18.63■□□□□ 0.57
HMGA2-208ENST00000537429 EIF2B2P49770 351 aaKnown RBP18.63■□□□□ 0.57
HMGA2-208ENST00000537429 FHL3Q13643 280 aa18.63■□□□□ 0.57
HMGA2-208ENST00000537429 TEPPQ6URK8 271 aa18.63■□□□□ 0.57
HMGA2-208ENST00000537429 KCNRGQ8N5I3 272 aa18.63■□□□□ 0.57
HMGA2-208ENST00000537429 OR4F17Q8NGA8 305 aa18.63■□□□□ 0.57
HMGA2-208ENST00000537429 OR4F4Q96R69 305 aa18.63■□□□□ 0.57
HMGA2-208ENST00000537429 WFDC1Q9HC57 220 aa18.63■□□□□ 0.57
HMGA2-208ENST00000537429 WDR83OSQ9Y284 106 aa18.63■□□□□ 0.57
HMGA2-208ENST00000537429 UBE2L5PA0A1B0GUS4 154 aa18.62■□□□□ 0.57
HMGA2-208ENST00000537429 TIGITQ495A1 244 aa18.62■□□□□ 0.57
HMGA2-208ENST00000537429 ZNF414Q96IQ9 312 aa18.62■□□□□ 0.57
HMGA2-208ENST00000537429 TRGV9Q99603 122 aa18.62■□□□□ 0.57
HMGA2-208ENST00000537429 SCGB2A1O75556 95 aa18.61■□□□□ 0.57
HMGA2-208ENST00000537429 OR2C1O95371 312 aa18.61■□□□□ 0.57
HMGA2-208ENST00000537429 A0A0D9SG52 128 aa18.6■□□□□ 0.57
HMGA2-208ENST00000537429 M0QZ24 198 aa18.6■□□□□ 0.57
HMGA2-208ENST00000537429 PF4P02776 101 aa18.6■□□□□ 0.57
HMGA2-208ENST00000537429 ZP3P21754 424 aa18.6■□□□□ 0.57
HMGA2-208ENST00000537429 HOXD3P31249 432 aaPredicted RBP18.6■□□□□ 0.57
HMGA2-208ENST00000537429 MYCNOSP40205 109 aa18.6■□□□□ 0.57
HMGA2-208ENST00000537429 LGALSLQ3ZCW2 172 aaPredicted RBP18.6■□□□□ 0.57
HMGA2-208ENST00000537429 IGHV3-35A0A0C4DH35 117 aa18.59■□□□□ 0.57
HMGA2-208ENST00000537429 YPEL3P61236 119 aaPredicted RBP18.59■□□□□ 0.57
HMGA2-208ENST00000537429 ZNF90Q03938 601 aa18.59■□□□□ 0.57
HMGA2-208ENST00000537429 RELQ04864 619 aaPredicted RBP18.59■□□□□ 0.57
HMGA2-208ENST00000537429 RPEL1Q2QD12 228 aa18.59■□□□□ 0.57
HMGA2-208ENST00000537429 SLURP1P55000 103 aa18.59■□□□□ 0.57
HMGA2-208ENST00000537429 BTNL8Q6UX41 500 aa18.59■□□□□ 0.57
HMGA2-208ENST00000537429 ZNF600Q6ZNG1 722 aa18.59■□□□□ 0.57
HMGA2-208ENST00000537429 GPHB5Q86YW7 130 aa18.59■□□□□ 0.57
HMGA2-208ENST00000537429 SPATA3Q8NHX4 192 aa18.59■□□□□ 0.57
HMGA2-208ENST00000537429 MGST2Q99735 147 aa18.59■□□□□ 0.57
HMGA2-208ENST00000537429 WDR61Q9GZS3 305 aaKnown RBP18.59■□□□□ 0.57
HMGA2-208ENST00000537429 ANK2Q01484 3957 aa18.58■□□□□ 0.57
HMGA2-208ENST00000537429 TAAR5O14804 337 aa18.58■□□□□ 0.56
HMGA2-208ENST00000537429 ZNF266Q14584 549 aa18.58■□□□□ 0.56
HMGA2-208ENST00000537429 AGPAT2O15120 278 aa18.57■□□□□ 0.56
HMGA2-208ENST00000537429 MPDU1O75352 247 aa18.57■□□□□ 0.56
HMGA2-208ENST00000537429 TOMM40O96008 361 aa18.57■□□□□ 0.56
HMGA2-208ENST00000537429 FGF7P21781 194 aa18.57■□□□□ 0.56
HMGA2-208ENST00000537429 KLF5Q13887 457 aaPredicted RBP18.57■□□□□ 0.56
HMGA2-208ENST00000537429 PARD6GQ9BYG4 376 aaPredicted RBP18.57■□□□□ 0.56
HMGA2-208ENST00000537429 NDUFA4O00483 81 aa18.56■□□□□ 0.56
HMGA2-208ENST00000537429 IFNA5P01569 189 aa18.56■□□□□ 0.56
HMGA2-208ENST00000537429 RD3LP0DJH9 198 aa18.56■□□□□ 0.56
HMGA2-208ENST00000537429 PSG1P11464 419 aa18.56■□□□□ 0.56
HMGA2-208ENST00000537429 TMEM182Q6ZP80 229 aaPredicted RBP18.56■□□□□ 0.56
HMGA2-208ENST00000537429 CYP2G1PQ6ZSU1 146 aa18.56■□□□□ 0.56
HMGA2-208ENST00000537429 TMUB2Q71RG4 321 aa18.56■□□□□ 0.56
HMGA2-208ENST00000537429 ARL6Q9H0F7 186 aa18.56■□□□□ 0.56
HMGA2-208ENST00000537429 PUS1Q9Y606 427 aaKnown RBP eCLIP18.56■□□□□ 0.56
HMGA2-208ENST00000537429 TSPAN15O95858 294 aa18.55■□□□□ 0.56
HMGA2-208ENST00000537429 FABP1P07148 127 aa18.55■□□□□ 0.56
HMGA2-208ENST00000537429 RAB31Q13636 194 aa18.55■□□□□ 0.56
HMGA2-208ENST00000537429 FAM106AQ4KMX7 169 aa18.55■□□□□ 0.56
HMGA2-208ENST00000537429 C9orf62Q8N4C0 152 aa18.55■□□□□ 0.56
HMGA2-208ENST00000537429 Q8WTZ3 238 aa18.55■□□□□ 0.56
HMGA2-208ENST00000537429 DLX4Q92988 240 aaPredicted RBP18.55■□□□□ 0.56
HMGA2-208ENST00000537429 ARPC5LQ9BPX5 153 aa18.55■□□□□ 0.56
HMGA2-208ENST00000537429 GGTLC1Q9BX51 225 aa18.55■□□□□ 0.56
HMGA2-208ENST00000537429 CYTL1Q9NRR1 136 aa18.55■□□□□ 0.56
HMGA2-208ENST00000537429 SLC45A2Q9UMX9 530 aa18.55■□□□□ 0.56
HMGA2-208ENST00000537429 CAMLGP49069 296 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms