RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 IGHV3-72A0A0B4J1Y9 119 aa4.48□□□□□ -1.69
PTPRD-213ENST00000537002 C5orf63A6NC05 138 aa4.48□□□□□ -1.69
PTPRD-213ENST00000537002 SYNGR3O43761 229 aa4.48□□□□□ -1.69
PTPRD-213ENST00000537002 IGLL1P15814 213 aa4.48□□□□□ -1.69
PTPRD-213ENST00000537002 MEF2CQ06413 473 aaPredicted RBP4.48□□□□□ -1.69
PTPRD-213ENST00000537002 ZNF714Q96N38 554 aa4.48□□□□□ -1.69
PTPRD-213ENST00000537002 V9GYV3 84 aa4.48□□□□□ -1.69
PTPRD-213ENST00000537002 IGKV1-12A0A0C4DH73 117 aa4.48□□□□□ -1.69
PTPRD-213ENST00000537002 SMIM27A0A1W2PRY6 76 aa4.48□□□□□ -1.69
PTPRD-213ENST00000537002 SH2D7A6NKC9 451 aaPredicted RBP4.48□□□□□ -1.69
PTPRD-213ENST00000537002 IGKV1D-12P01611 117 aa4.48□□□□□ -1.69
PTPRD-213ENST00000537002 SPINK8P0C7L1 97 aa4.48□□□□□ -1.69
PTPRD-213ENST00000537002 PRTN3P24158 256 aa4.48□□□□□ -1.69
PTPRD-213ENST00000537002 LTBRP36941 435 aa4.48□□□□□ -1.69
PTPRD-213ENST00000537002 UFSP1Q6NVU6 142 aa4.48□□□□□ -1.69
PTPRD-213ENST00000537002 BCL6BQ8N143 479 aaPredicted RBP4.48□□□□□ -1.69
PTPRD-213ENST00000537002 SLC22A18ASQ8N1D0 253 aa4.48□□□□□ -1.69
PTPRD-213ENST00000537002 ATP6V0E2Q8NHE4 81 aa4.48□□□□□ -1.69
PTPRD-213ENST00000537002 LRRK1Q38SD2 2015 aa4.48□□□□□ -1.69
PTPRD-213ENST00000537002 ZNF138P52744 262 aa4.48□□□□□ -1.69
PTPRD-213ENST00000537002 WFDC12Q8WWY7 111 aa4.48□□□□□ -1.69
PTPRD-213ENST00000537002 ZNF837Q96EG3 531 aaPredicted RBP4.48□□□□□ -1.69
PTPRD-213ENST00000537002 TRBV20OR9-2A0A075B6H5 130 aa4.48□□□□□ -1.69
PTPRD-213ENST00000537002 F2Z2F3 143 aa4.48□□□□□ -1.69
PTPRD-213ENST00000537002 COX6CP09669 75 aa4.48□□□□□ -1.69
PTPRD-213ENST00000537002 ZNF146Q15072 292 aa4.48□□□□□ -1.69
PTPRD-213ENST00000537002 RBPMS2Q6ZRY4 209 aaKnown RBP4.48□□□□□ -1.69
PTPRD-213ENST00000537002 KLHDC3Q9BQ90 382 aa4.48□□□□□ -1.69
PTPRD-213ENST00000537002 SCNM1Q9BWG6 230 aa4.48□□□□□ -1.69
PTPRD-213ENST00000537002 A0A0G2JRQ6 117 aa4.47□□□□□ -1.69
PTPRD-213ENST00000537002 TMEM8BA6NDV4 472 aa4.47□□□□□ -1.69
PTPRD-213ENST00000537002 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.47□□□□□ -1.69
PTPRD-213ENST00000537002 MYO7BQ6PIF6 2116 aa4.47□□□□□ -1.69
PTPRD-213ENST00000537002 CCL17Q92583 94 aa4.47□□□□□ -1.69
PTPRD-213ENST00000537002 SPATA25Q9BR10 227 aa4.47□□□□□ -1.69
PTPRD-213ENST00000537002 IFI27L2Q9H2X8 130 aa4.47□□□□□ -1.69
PTPRD-213ENST00000537002 WNT9BO14905 357 aa4.47□□□□□ -1.69
PTPRD-213ENST00000537002 LOXL3P58215 753 aa4.47□□□□□ -1.69
PTPRD-213ENST00000537002 EFNB3Q15768 340 aa4.47□□□□□ -1.69
PTPRD-213ENST00000537002 TDRG1Q3Y452 100 aa4.47□□□□□ -1.69
PTPRD-213ENST00000537002 ZFAND6Q6FIF0 208 aa4.47□□□□□ -1.69
PTPRD-213ENST00000537002 Q8N976 141 aa4.47□□□□□ -1.69
PTPRD-213ENST00000537002 GEMIN7Q9H840 131 aaKnown RBP4.47□□□□□ -1.69
PTPRD-213ENST00000537002 TRGV5A0A0B4J1U4 118 aa4.47□□□□□ -1.69
PTPRD-213ENST00000537002 CGB1A6NKQ9 187 aa4.47□□□□□ -1.69
PTPRD-213ENST00000537002 PLA2G5P39877 138 aa4.47□□□□□ -1.69
PTPRD-213ENST00000537002 FOXI2Q6ZQN5 318 aa4.47□□□□□ -1.69
PTPRD-213ENST00000537002 DCTN5Q9BTE1 182 aa4.47□□□□□ -1.69
PTPRD-213ENST00000537002 LIME1Q9H400 295 aa4.47□□□□□ -1.69
PTPRD-213ENST00000537002 TMEM131Q92545 1883 aa4.47□□□□□ -1.69
PTPRD-213ENST00000537002 IGKV1-27A0A075B6S5 117 aa4.47□□□□□ -1.69
PTPRD-213ENST00000537002 A0A1B0GUT8 65 aa4.47□□□□□ -1.69
PTPRD-213ENST00000537002 NXPH1P58417 271 aa4.47□□□□□ -1.69
PTPRD-213ENST00000537002 TREML4Q6UXN2 200 aa4.47□□□□□ -1.69
PTPRD-213ENST00000537002 GTSCR1Q86UQ5 136 aa4.47□□□□□ -1.69
PTPRD-213ENST00000537002 OR13A1Q8NGR1 328 aa4.47□□□□□ -1.69
PTPRD-213ENST00000537002 FMC1Q96HJ9 113 aa4.47□□□□□ -1.69
PTPRD-213ENST00000537002 RNF7Q9UBF6 113 aa4.47□□□□□ -1.69
PTPRD-213ENST00000537002 TP53TG3Q9ULZ0 132 aa4.47□□□□□ -1.69
PTPRD-213ENST00000537002 MGST3O14880 152 aa4.47□□□□□ -1.69
PTPRD-213ENST00000537002 IGKV1-5P01602 117 aa4.47□□□□□ -1.69
PTPRD-213ENST00000537002 IGHV4-39P01824 125 aa4.47□□□□□ -1.69
PTPRD-213ENST00000537002 TFF1P04155 84 aa4.47□□□□□ -1.69
PTPRD-213ENST00000537002 TNFRSF1AP19438 455 aa4.47□□□□□ -1.69
PTPRD-213ENST00000537002 ADIPOQQ15848 244 aa4.47□□□□□ -1.69
PTPRD-213ENST00000537002 TAL2Q16559 108 aa4.47□□□□□ -1.69
PTPRD-213ENST00000537002 ZADH2Q8N4Q0 377 aa4.47□□□□□ -1.69
PTPRD-213ENST00000537002 CCL13Q99616 98 aa4.47□□□□□ -1.69
PTPRD-213ENST00000537002 CALYQ9NYX4 217 aa4.47□□□□□ -1.69
PTPRD-213ENST00000537002 TRAV8-4A0A0B4J246 113 aa4.47□□□□□ -1.69
PTPRD-213ENST00000537002 HOXA3O43365 443 aaPredicted RBP4.47□□□□□ -1.69
PTPRD-213ENST00000537002 FCGR2BP31994 310 aaPredicted RBP4.47□□□□□ -1.69
PTPRD-213ENST00000537002 OR9G1Q8NH87 305 aa4.47□□□□□ -1.69
PTPRD-213ENST00000537002 HIGD1BQ9P298 99 aa4.47□□□□□ -1.69
PTPRD-213ENST00000537002 HBDP02042 147 aa4.46□□□□□ -1.69
PTPRD-213ENST00000537002 AZU1P20160 251 aa4.46□□□□□ -1.69
PTPRD-213ENST00000537002 CRYGSP22914 178 aa4.46□□□□□ -1.69
PTPRD-213ENST00000537002 SRSF1Q07955 248 aaKnown RBP eCLIP4.46□□□□□ -1.69
PTPRD-213ENST00000537002 TMEM30BQ3MIR4 351 aa4.46□□□□□ -1.69
PTPRD-213ENST00000537002 SARAFQ96BY9 339 aa4.46□□□□□ -1.69
PTPRD-213ENST00000537002 ZNF501Q96CX3 271 aaPredicted RBP4.46□□□□□ -1.69
PTPRD-213ENST00000537002 A0A1W2PQF6 199 aa4.46□□□□□ -1.69
PTPRD-213ENST00000537002 GAGE12HA6NDE8 117 aa4.46□□□□□ -1.69
PTPRD-213ENST00000537002 MPV17P39210 176 aa4.46□□□□□ -1.69
PTPRD-213ENST00000537002 ZNF585BQ52M93 769 aa4.46□□□□□ -1.69
PTPRD-213ENST00000537002 TMEM105Q8N8V8 129 aa4.46□□□□□ -1.69
PTPRD-213ENST00000537002 NPFFR1Q9GZQ6 430 aa4.46□□□□□ -1.69
PTPRD-213ENST00000537002 JPT1Q9UK76 154 aa4.46□□□□□ -1.69
PTPRD-213ENST00000537002 IGHV1OR15-9A0A0B4J2B8 117 aa4.46□□□□□ -1.7
PTPRD-213ENST00000537002 NUPR1O60356 82 aa4.46□□□□□ -1.7
PTPRD-213ENST00000537002 DLX6P56179 175 aa4.46□□□□□ -1.7
PTPRD-213ENST00000537002 ODF3L1Q8IXM7 274 aa4.46□□□□□ -1.7
PTPRD-213ENST00000537002 SS18L2Q9UHA2 77 aa4.46□□□□□ -1.7
PTPRD-213ENST00000537002 INO80CQ6PI98 192 aaPredicted RBP4.46□□□□□ -1.7
PTPRD-213ENST00000537002 OR4C13Q8NGP0 309 aa4.46□□□□□ -1.7
PTPRD-213ENST00000537002 TRGV8A0A0C4DH27 118 aa4.46□□□□□ -1.7
PTPRD-213ENST00000537002 IGHV4-34P06331 123 aa4.46□□□□□ -1.7
PTPRD-213ENST00000537002 THBDP07204 575 aa4.46□□□□□ -1.7
PTPRD-213ENST00000537002 PTGDSP41222 190 aa4.46□□□□□ -1.7
PTPRD-213ENST00000537002 LINC00310P59036 64 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms