RNA–Protein interactions for RNA: ENST00000536722.5

RFX4-205, Transcript of regulatory factor X4, humanhuman

TSL 2

Gene RFX4, Length 1,228 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-205ENST00000536722 FAM90A26D6RGX4 464 aa8.5□□□□□ -1.05
RFX4-205ENST00000536722 PRSS46E5RG02 174 aa8.5□□□□□ -1.05
RFX4-205ENST00000536722 NHLRC4P0CG21 123 aaPredicted RBP8.5□□□□□ -1.05
RFX4-205ENST00000536722 IAPPP10997 89 aa8.5□□□□□ -1.05
RFX4-205ENST00000536722 RND2P52198 227 aa8.5□□□□□ -1.05
RFX4-205ENST00000536722 GUCA2BQ16661 112 aa8.5□□□□□ -1.05
RFX4-205ENST00000536722 FAM90A2PQ658T7 463 aa8.5□□□□□ -1.05
RFX4-205ENST00000536722 ZNF600Q6ZNG1 722 aa8.5□□□□□ -1.05
RFX4-205ENST00000536722 DEFB125Q8N687 156 aa8.5□□□□□ -1.05
RFX4-205ENST00000536722 OR4D5Q8NGN0 318 aa8.5□□□□□ -1.05
RFX4-205ENST00000536722 MITD1Q8WV92 249 aa8.5□□□□□ -1.05
RFX4-205ENST00000536722 S100ZQ8WXG8 99 aa8.5□□□□□ -1.05
RFX4-205ENST00000536722 RNF2Q99496 336 aa8.5□□□□□ -1.05
RFX4-205ENST00000536722 HIPK2Q9H2X6 1198 aa8.5□□□□□ -1.05
RFX4-205ENST00000536722 CACFD1Q9UGQ2 172 aa8.5□□□□□ -1.05
RFX4-205ENST00000536722 U3KQ87 197 aa8.5□□□□□ -1.05
RFX4-205ENST00000536722 AGRNO00468 2067 aa8.5□□□□□ -1.05
RFX4-205ENST00000536722 IGKV1D-37A0A075B6S9 117 aa8.49□□□□□ -1.05
RFX4-205ENST00000536722 TRAV6A0A075B6T7 132 aa8.49□□□□□ -1.05
RFX4-205ENST00000536722 RBMY1BA6NDE4 496 aaKnown RBP8.49□□□□□ -1.05
RFX4-205ENST00000536722 RBMY1EA6NEQ0 496 aaKnown RBP8.49□□□□□ -1.05
RFX4-205ENST00000536722 TSPAN4O14817 238 aa8.49□□□□□ -1.05
RFX4-205ENST00000536722 YIF1AO95070 293 aa8.49□□□□□ -1.05
RFX4-205ENST00000536722 IFNA10P01566 189 aa8.49□□□□□ -1.05
RFX4-205ENST00000536722 RBMY1DP0C7P1 496 aaKnown RBP8.49□□□□□ -1.05
RFX4-205ENST00000536722 SLC25A4P12235 298 aa8.49□□□□□ -1.05
RFX4-205ENST00000536722 ID3Q02535 119 aa8.49□□□□□ -1.05
RFX4-205ENST00000536722 ASAH1Q13510 395 aa8.49□□□□□ -1.05
RFX4-205ENST00000536722 C4orf46Q504U0 113 aa8.49□□□□□ -1.05
RFX4-205ENST00000536722 SLC16A13Q7RTY0 426 aa8.49□□□□□ -1.05
RFX4-205ENST00000536722 GTSCR1Q86UQ5 136 aa8.49□□□□□ -1.05
RFX4-205ENST00000536722 ST8SIA2Q92186 375 aa8.49□□□□□ -1.05
RFX4-205ENST00000536722 SEC22CQ9BRL7 303 aa8.49□□□□□ -1.05
RFX4-205ENST00000536722 TM2D3Q9BRN9 247 aa8.49□□□□□ -1.05
RFX4-205ENST00000536722 RHPN1-AS1Q9BWJ2 59 aa8.49□□□□□ -1.05
RFX4-205ENST00000536722 VSIRQ9H7M9 311 aa8.49□□□□□ -1.05
RFX4-205ENST00000536722 NUDT15Q9NV35 164 aa8.49□□□□□ -1.05
RFX4-205ENST00000536722 TRAV14DV4A0A0A6YYC5 116 aa8.48□□□□□ -1.05
RFX4-205ENST00000536722 PIGBOS1A0A0B4J2F0 54 aa8.48□□□□□ -1.05
RFX4-205ENST00000536722 RPS10-NUDT3A0A1W2PQS6 291 aa8.48□□□□□ -1.05
RFX4-205ENST00000536722 SYNGR2O43760 224 aa8.48□□□□□ -1.05
RFX4-205ENST00000536722 UPK1BO75841 260 aa8.48□□□□□ -1.05
RFX4-205ENST00000536722 HAGHQ16775 308 aa8.48□□□□□ -1.05
RFX4-205ENST00000536722 ODF3L2Q3SX64 289 aa8.48□□□□□ -1.05
RFX4-205ENST00000536722 COQ8AQ8NI60 647 aa8.48□□□□□ -1.05
RFX4-205ENST00000536722 NPIPB3Q92617 1050 aa8.48□□□□□ -1.05
RFX4-205ENST00000536722 SPAG8Q99932 426 aaPredicted RBP8.48□□□□□ -1.05
RFX4-205ENST00000536722 BATF3Q9NR55 127 aa8.48□□□□□ -1.05
RFX4-205ENST00000536722 U3KQK5 164 aa8.48□□□□□ -1.05
RFX4-205ENST00000536722 CSMD3Q7Z407 3707 aa8.47□□□□□ -1.05
RFX4-205ENST00000536722 IGKV1OR2-108A0A075B7D4 117 aa8.47□□□□□ -1.05
RFX4-205ENST00000536722 IGHV3-66A0A0C4DH42 116 aa8.47□□□□□ -1.05
RFX4-205ENST00000536722 OR11H12B2RN74 326 aa8.47□□□□□ -1.05
RFX4-205ENST00000536722 WRBO00258 174 aa8.47□□□□□ -1.05
RFX4-205ENST00000536722 CCSO14618 274 aa8.47□□□□□ -1.05
RFX4-205ENST00000536722 OR10J1P30954 320 aa8.47□□□□□ -1.05
RFX4-205ENST00000536722 PAX9P55771 341 aa8.47□□□□□ -1.05
RFX4-205ENST00000536722 POLR2GP62487 172 aaKnown RBP eCLIP8.47□□□□□ -1.05
RFX4-205ENST00000536722 GAMTQ14353 236 aa8.47□□□□□ -1.05
RFX4-205ENST00000536722 ZNF846Q147U1 533 aa8.47□□□□□ -1.05
RFX4-205ENST00000536722 RBPMS2Q6ZRY4 209 aaKnown RBP8.47□□□□□ -1.05
RFX4-205ENST00000536722 OR1S2Q8NGQ3 325 aa8.47□□□□□ -1.05
RFX4-205ENST00000536722 ACY3Q96HD9 319 aa8.47□□□□□ -1.05
RFX4-205ENST00000536722 WDR12Q9GZL7 423 aaKnown RBP8.47□□□□□ -1.05
RFX4-205ENST00000536722 SRD5A3Q9H8P0 318 aa8.47□□□□□ -1.05
RFX4-205ENST00000536722 U3KQE9 123 aa8.47□□□□□ -1.05
RFX4-205ENST00000536722 TRAV30A0A087WSZ9 112 aa8.46□□□□□ -1.06
RFX4-205ENST00000536722 PMS2P5A8MQ11 134 aa8.46□□□□□ -1.06
RFX4-205ENST00000536722 H3BP45 60 aa8.46□□□□□ -1.06
RFX4-205ENST00000536722 IFNA4P05014 189 aa8.46□□□□□ -1.06
RFX4-205ENST00000536722 H2AFB2P0C5Z0 115 aa8.46□□□□□ -1.06
RFX4-205ENST00000536722 CRYBB3P26998 211 aa8.46□□□□□ -1.06
RFX4-205ENST00000536722 ATP5IP56385 69 aaPredicted RBP8.46□□□□□ -1.06
RFX4-205ENST00000536722 YPEL3P61236 119 aaPredicted RBP8.46□□□□□ -1.06
RFX4-205ENST00000536722 USF2Q15853 346 aaPredicted RBP8.46□□□□□ -1.06
RFX4-205ENST00000536722 ETFRF1Q6IPR1 90 aa8.46□□□□□ -1.06
RFX4-205ENST00000536722 NOXA1Q86UR1 476 aa8.46□□□□□ -1.06
RFX4-205ENST00000536722 ZBTB8BQ8NAP8 495 aaPredicted RBP8.46□□□□□ -1.06
RFX4-205ENST00000536722 ZNF431Q8TF32 576 aaPredicted RBP8.46□□□□□ -1.06
RFX4-205ENST00000536722 RCHY1Q96PM5 261 aa8.46□□□□□ -1.06
RFX4-205ENST00000536722 UBQLN2Q9UHD9 624 aa8.46□□□□□ -1.06
RFX4-205ENST00000536722 RCL1Q9Y2P8 373 aaKnown RBP8.46□□□□□ -1.06
RFX4-205ENST00000536722 ELOA3CA0A087WX78 387 aaPredicted RBP8.45□□□□□ -1.06
RFX4-205ENST00000536722 FAM240BA0A1B0GVZ2 78 aa8.45□□□□□ -1.06
RFX4-205ENST00000536722 MED6O75586 246 aa8.45□□□□□ -1.06
RFX4-205ENST00000536722 CCNKO75909 580 aa8.45□□□□□ -1.06
RFX4-205ENST00000536722 DFFBO76075 338 aa8.45□□□□□ -1.06
RFX4-205ENST00000536722 TOMM40O96008 361 aa8.45□□□□□ -1.06
RFX4-205ENST00000536722 GPX4P36969 197 aaPredicted RBP8.45□□□□□ -1.06
RFX4-205ENST00000536722 NKX2-1P43699 371 aaPredicted RBP8.45□□□□□ -1.06
RFX4-205ENST00000536722 ZNF90Q03938 601 aa8.45□□□□□ -1.06
RFX4-205ENST00000536722 ZNF124Q15973 351 aa8.45□□□□□ -1.06
RFX4-205ENST00000536722 IAH1Q2TAA2 248 aaPredicted RBP8.45□□□□□ -1.06
RFX4-205ENST00000536722 STPG3Q8N7X2 389 aa8.45□□□□□ -1.06
RFX4-205ENST00000536722 GINS3Q9BRX5 216 aa8.45□□□□□ -1.06
RFX4-205ENST00000536722 TUBA4BQ9H853 241 aa8.45□□□□□ -1.06
RFX4-205ENST00000536722 RETNQ9HD89 108 aa8.45□□□□□ -1.06
RFX4-205ENST00000536722 IGKV3-7A0A075B6H7 116 aa8.44□□□□□ -1.06
RFX4-205ENST00000536722 EREGO14944 169 aa8.44□□□□□ -1.06
RFX4-205ENST00000536722 SSSCA1O60232 199 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms