RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 ZNF355PQ9NSJ1 428 aa10.6□□□□□ -0.71
LDLR-203ENST00000535915 KIR2DL5BA0A0G2JN68 375 aa10.6□□□□□ -0.71
LDLR-203ENST00000535915 KIR2DL5BA0A0G2JPC4 375 aa10.6□□□□□ -0.71
LDLR-203ENST00000535915 ZZEF1O43149 2961 aa10.6□□□□□ -0.71
LDLR-203ENST00000535915 PYYP10082 97 aa10.6□□□□□ -0.71
LDLR-203ENST00000535915 APOBEC3AP31941 199 aaPredicted RBP10.6□□□□□ -0.71
LDLR-203ENST00000535915 RBPJQ06330 500 aa10.6□□□□□ -0.71
LDLR-203ENST00000535915 KIR2DL5AQ8N109 375 aa10.6□□□□□ -0.71
LDLR-203ENST00000535915 OR1L4Q8NGR5 311 aa10.6□□□□□ -0.71
LDLR-203ENST00000535915 NAGKQ9UJ70 344 aa10.6□□□□□ -0.71
LDLR-203ENST00000535915 SNURFLB1AK76 121 aa10.6□□□□□ -0.71
LDLR-203ENST00000535915 SPINK4O60575 86 aa10.6□□□□□ -0.71
LDLR-203ENST00000535915 FRMD6-AS1P0C7T7 363 aa10.6□□□□□ -0.71
LDLR-203ENST00000535915 BPIFB3P59826 476 aa10.6□□□□□ -0.71
LDLR-203ENST00000535915 MRPL36Q9P0J6 103 aaKnown RBP10.6□□□□□ -0.71
LDLR-203ENST00000535915 SSUH2Q9Y2M2 353 aa10.6□□□□□ -0.71
LDLR-203ENST00000535915 IGKV1D-37A0A075B6S9 117 aa10.59□□□□□ -0.71
LDLR-203ENST00000535915 CRISP2P16562 243 aa10.59□□□□□ -0.71
LDLR-203ENST00000535915 BRS3P32247 399 aa10.59□□□□□ -0.71
LDLR-203ENST00000535915 LGALS7P47929 136 aa10.59□□□□□ -0.71
LDLR-203ENST00000535915 PPOXP50336 477 aa10.59□□□□□ -0.71
LDLR-203ENST00000535915 DLX1P56177 255 aa10.59□□□□□ -0.71
LDLR-203ENST00000535915 SELENOTP62341 195 aa10.59□□□□□ -0.71
LDLR-203ENST00000535915 C11orf42Q8N5U0 333 aa10.59□□□□□ -0.71
LDLR-203ENST00000535915 CMTM2Q8TAZ6 248 aa10.59□□□□□ -0.71
LDLR-203ENST00000535915 PAXXQ9BUH6 204 aa10.59□□□□□ -0.71
LDLR-203ENST00000535915 OSTCQ9NRP0 149 aa10.59□□□□□ -0.71
LDLR-203ENST00000535915 CD3EP07766 207 aa10.59□□□□□ -0.71
LDLR-203ENST00000535915 PRB3Q04118 309 aaPredicted RBP10.59□□□□□ -0.71
LDLR-203ENST00000535915 IBA57Q5T440 356 aaKnown RBP10.59□□□□□ -0.71
LDLR-203ENST00000535915 HCP5Q6MZN7 132 aa10.59□□□□□ -0.71
LDLR-203ENST00000535915 PATE2Q6UY27 113 aa10.59□□□□□ -0.71
LDLR-203ENST00000535915 NHLRC2Q8NBF2 726 aa10.59□□□□□ -0.71
LDLR-203ENST00000535915 TPRP12270 2363 aaKnown RBP10.58□□□□□ -0.72
LDLR-203ENST00000535915 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.58□□□□□ -0.72
LDLR-203ENST00000535915 B9A039 149 aa10.58□□□□□ -0.72
LDLR-203ENST00000535915 IGLV2-8P01709 118 aa10.58□□□□□ -0.72
LDLR-203ENST00000535915 APELAP0DMC3 54 aa10.58□□□□□ -0.72
LDLR-203ENST00000535915 RPL19P84098 196 aaKnown RBP10.58□□□□□ -0.72
LDLR-203ENST00000535915 THAP8Q8NA92 274 aa10.58□□□□□ -0.72
LDLR-203ENST00000535915 IGF2BP2-AS1Q96M15 143 aa10.58□□□□□ -0.72
LDLR-203ENST00000535915 MS4A10Q96PG2 267 aa10.58□□□□□ -0.72
LDLR-203ENST00000535915 TBX15Q96SF7 602 aa10.58□□□□□ -0.72
LDLR-203ENST00000535915 SPOCK3Q9BQ16 436 aa10.58□□□□□ -0.72
LDLR-203ENST00000535915 SERTAD4Q9NUC0 356 aa10.58□□□□□ -0.72
LDLR-203ENST00000535915 DCHS2Q6V1P9 2916 aa10.58□□□□□ -0.72
LDLR-203ENST00000535915 LYNX1G3V0Z9 82 aa10.58□□□□□ -0.72
LDLR-203ENST00000535915 ISLRO14498 428 aa10.58□□□□□ -0.72
LDLR-203ENST00000535915 PLAUP00749 431 aa10.58□□□□□ -0.72
LDLR-203ENST00000535915 LYNX1P0DP58 116 aa10.58□□□□□ -0.72
LDLR-203ENST00000535915 TCL1AP56279 114 aa10.58□□□□□ -0.72
LDLR-203ENST00000535915 SLC35B1P78383 322 aa10.58□□□□□ -0.72
LDLR-203ENST00000535915 TNXAQ16473 311 aa10.58□□□□□ -0.72
LDLR-203ENST00000535915 MRGPRG-AS1Q2M3A8 158 aa10.58□□□□□ -0.72
LDLR-203ENST00000535915 ST6GALNAC3Q8NDV1 305 aa10.58□□□□□ -0.72
LDLR-203ENST00000535915 LINC00479Q96M42 142 aa10.58□□□□□ -0.72
LDLR-203ENST00000535915 RALYQ9UKM9 306 aaKnown RBP10.58□□□□□ -0.72
LDLR-203ENST00000535915 LINC00305Q7Z4B0 112 aa10.57□□□□□ -0.72
LDLR-203ENST00000535915 MRPL52Q86TS9 123 aaKnown RBP10.57□□□□□ -0.72
LDLR-203ENST00000535915 GNB1LQ9BYB4 327 aa10.57□□□□□ -0.72
LDLR-203ENST00000535915 TP53TG3Q9ULZ0 132 aa10.57□□□□□ -0.72
LDLR-203ENST00000535915 AMMECR1Q9Y4X0 333 aaPredicted RBP10.57□□□□□ -0.72
LDLR-203ENST00000535915 PTPRQQ9UMZ3 2332 aa10.57□□□□□ -0.72
LDLR-203ENST00000535915 TRBV9A0A0B4J1U6 114 aa10.57□□□□□ -0.72
LDLR-203ENST00000535915 IGHV2-26A0A0B4J1V2 119 aa10.57□□□□□ -0.72
LDLR-203ENST00000535915 MOSP00540 346 aa10.57□□□□□ -0.72
LDLR-203ENST00000535915 FAM87AP0C7U9 286 aa10.57□□□□□ -0.72
LDLR-203ENST00000535915 CNTFRP26992 372 aa10.57□□□□□ -0.72
LDLR-203ENST00000535915 CX3CL1P78423 397 aa10.57□□□□□ -0.72
LDLR-203ENST00000535915 VKORC1Q9BQB6 163 aa10.57□□□□□ -0.72
LDLR-203ENST00000535915 CDC42EP3Q9UKI2 254 aa10.57□□□□□ -0.72
LDLR-203ENST00000535915 IGLC7A0M8Q6 106 aa10.56□□□□□ -0.72
LDLR-203ENST00000535915 K7ENP7 123 aa10.56□□□□□ -0.72
LDLR-203ENST00000535915 ORM2P19652 201 aa10.56□□□□□ -0.72
LDLR-203ENST00000535915 PRRX1P54821 245 aa10.56□□□□□ -0.72
LDLR-203ENST00000535915 ETFRF1Q6IPR1 90 aa10.56□□□□□ -0.72
LDLR-203ENST00000535915 BAGE3Q86Y29 109 aa10.56□□□□□ -0.72
LDLR-203ENST00000535915 BAGE2Q86Y30 109 aa10.56□□□□□ -0.72
LDLR-203ENST00000535915 TEX45Q8NA69 505 aa10.56□□□□□ -0.72
LDLR-203ENST00000535915 C22orf15Q8WYQ4 148 aa10.56□□□□□ -0.72
LDLR-203ENST00000535915 TNFRSF19Q9NS68 423 aa10.56□□□□□ -0.72
LDLR-203ENST00000535915 NAT8BQ9UHF3 227 aa10.56□□□□□ -0.72
LDLR-203ENST00000535915 INSIG2Q9Y5U4 225 aa10.56□□□□□ -0.72
LDLR-203ENST00000535915 RELNP78509 3460 aa10.56□□□□□ -0.72
LDLR-203ENST00000535915 SERF1AO75920 110 aa10.56□□□□□ -0.72
LDLR-203ENST00000535915 RPL27AP46776 148 aaKnown RBP10.56□□□□□ -0.72
LDLR-203ENST00000535915 TFPI2P48307 235 aa10.56□□□□□ -0.72
LDLR-203ENST00000535915 RUSC1-AS1Q66K80 236 aa10.56□□□□□ -0.72
LDLR-203ENST00000535915 LINC01560Q8TB33 94 aa10.56□□□□□ -0.72
LDLR-203ENST00000535915 TNFRSF14Q92956 283 aa10.56□□□□□ -0.72
LDLR-203ENST00000535915 MIEN1Q9BRT3 115 aa10.56□□□□□ -0.72
LDLR-203ENST00000535915 TPPP2P59282 170 aa10.55□□□□□ -0.72
LDLR-203ENST00000535915 WDR73Q6P4I2 378 aa10.55□□□□□ -0.72
LDLR-203ENST00000535915 TOMM20LQ6UXN7 152 aa10.55□□□□□ -0.72
LDLR-203ENST00000535915 C19orf35Q6ZS72 473 aa10.55□□□□□ -0.72
LDLR-203ENST00000535915 ZNF329Q86UD4 541 aa10.55□□□□□ -0.72
LDLR-203ENST00000535915 OR1B1Q8NGR6 318 aa10.55□□□□□ -0.72
LDLR-203ENST00000535915 FXYD5Q96DB9 178 aa10.55□□□□□ -0.72
LDLR-203ENST00000535915 SCNM1Q9BWG6 230 aa10.55□□□□□ -0.72
LDLR-203ENST00000535915 IGHV3-21A0A0B4J1V1 117 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms