RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 GABRA6Q16445 453 aa5.37□□□□□ -1.55
USP28-202ENST00000535607 ZNF766Q5HY98 468 aa5.37□□□□□ -1.55
USP28-202ENST00000535607 PRAMEF5Q5TYX0 476 aa5.37□□□□□ -1.55
USP28-202ENST00000535607 PRAMEF6Q5VXH4 476 aa5.37□□□□□ -1.55
USP28-202ENST00000535607 MORN5Q5VZ52 161 aa5.37□□□□□ -1.55
USP28-202ENST00000535607 SLC35E4Q6ICL7 350 aa5.37□□□□□ -1.55
USP28-202ENST00000535607 BPIFA4PQ86YQ2 179 aa5.37□□□□□ -1.55
USP28-202ENST00000535607 ZNF114Q8NC26 417 aa5.37□□□□□ -1.55
USP28-202ENST00000535607 OR4S2Q8NH73 311 aa5.37□□□□□ -1.55
USP28-202ENST00000535607 IMMP1LQ96LU5 166 aa5.37□□□□□ -1.55
USP28-202ENST00000535607 FER1L6-AS2Q96M78 137 aa5.37□□□□□ -1.55
USP28-202ENST00000535607 GGTLC1Q9BX51 225 aa5.37□□□□□ -1.55
USP28-202ENST00000535607 AKIRIN1Q9H9L7 192 aaPredicted RBP5.37□□□□□ -1.55
USP28-202ENST00000535607 PEMTQ9UBM1 199 aa5.37□□□□□ -1.55
USP28-202ENST00000535607 OR51B2Q9Y5P1 312 aa5.37□□□□□ -1.55
USP28-202ENST00000535607 ALPK2Q86TB3 2170 aa5.37□□□□□ -1.55
USP28-202ENST00000535607 PTPRZ1P23471 2315 aaPredicted RBP5.37□□□□□ -1.55
USP28-202ENST00000535607 SEC16AO15027 2179 aa5.36□□□□□ -1.55
USP28-202ENST00000535607 ARID1AO14497 2285 aa5.36□□□□□ -1.55
USP28-202ENST00000535607 CACNA1AO00555 2505 aa5.36□□□□□ -1.55
USP28-202ENST00000535607 ASPMQ8IZT6 3477 aa5.36□□□□□ -1.55
USP28-202ENST00000535607 TRBV20OR9-2A0A075B6H5 130 aa5.36□□□□□ -1.55
USP28-202ENST00000535607 A0A1B0GV72 72 aa5.36□□□□□ -1.55
USP28-202ENST00000535607 PGPEP1LA6NFU8 196 aa5.36□□□□□ -1.55
USP28-202ENST00000535607 ZNF716A6NP11 495 aa5.36□□□□□ -1.55
USP28-202ENST00000535607 TEX22C9J3V5 150 aa5.36□□□□□ -1.55
USP28-202ENST00000535607 IFNL4K9M1U5 179 aa5.36□□□□□ -1.55
USP28-202ENST00000535607 TAX1BP3O14907 124 aa5.36□□□□□ -1.55
USP28-202ENST00000535607 SMPD2O60906 423 aa5.36□□□□□ -1.55
USP28-202ENST00000535607 LEPROTL1O95214 131 aa5.36□□□□□ -1.55
USP28-202ENST00000535607 OR2H2O95918 312 aa5.36□□□□□ -1.55
USP28-202ENST00000535607 IGLL1P15814 213 aa5.36□□□□□ -1.55
USP28-202ENST00000535607 UCNP55089 124 aa5.36□□□□□ -1.55
USP28-202ENST00000535607 ZNF146Q15072 292 aa5.36□□□□□ -1.55
USP28-202ENST00000535607 EFNB3Q15768 340 aa5.36□□□□□ -1.55
USP28-202ENST00000535607 PSG3Q16557 428 aa5.36□□□□□ -1.55
USP28-202ENST00000535607 BVES-AS1Q5T3Y7 98 aa5.36□□□□□ -1.55
USP28-202ENST00000535607 LCE5AQ5TCM9 118 aa5.36□□□□□ -1.55
USP28-202ENST00000535607 C9orf135Q5VTT2 229 aa5.36□□□□□ -1.55
USP28-202ENST00000535607 AMMECR1LQ6DCA0 310 aa5.36□□□□□ -1.55
USP28-202ENST00000535607 Q6P435 159 aa5.36□□□□□ -1.55
USP28-202ENST00000535607 OR4F17Q8NGA8 305 aa5.36□□□□□ -1.55
USP28-202ENST00000535607 C18orf32Q8TCD1 76 aa5.36□□□□□ -1.55
USP28-202ENST00000535607 ZNF430Q9H8G1 570 aaPredicted RBP5.36□□□□□ -1.55
USP28-202ENST00000535607 HES4Q9HCC6 221 aa5.36□□□□□ -1.55
USP28-202ENST00000535607 YTHDF2Q9Y5A9 579 aaKnown RBP5.36□□□□□ -1.55
USP28-202ENST00000535607 CFAP47Q6ZTR5 3102 aa5.36□□□□□ -1.55
USP28-202ENST00000535607 AHCTF1Q8WYP5 2266 aa5.35□□□□□ -1.55
USP28-202ENST00000535607 KNTC1P50748 2209 aa5.35□□□□□ -1.55
USP28-202ENST00000535607 NCOA6Q14686 2063 aaPredicted RBP5.35□□□□□ -1.55
USP28-202ENST00000535607 IGKV3D-15A0A087WSY6 115 aa5.35□□□□□ -1.55
USP28-202ENST00000535607 H3BRM9 83 aa5.35□□□□□ -1.55
USP28-202ENST00000535607 SYS1-DBNDD2H3BUS1 97 aa5.35□□□□□ -1.55
USP28-202ENST00000535607 SYNGR1O43759 233 aa5.35□□□□□ -1.55
USP28-202ENST00000535607 RHBDL1O75783 438 aa5.35□□□□□ -1.55
USP28-202ENST00000535607 NBEAP1P0C6P0 100 aa5.35□□□□□ -1.55
USP28-202ENST00000535607 PSG1P11464 419 aa5.35□□□□□ -1.55
USP28-202ENST00000535607 HTR1DP28221 377 aa5.35□□□□□ -1.55
USP28-202ENST00000535607 OTX2P32243 289 aa5.35□□□□□ -1.55
USP28-202ENST00000535607 GPR183P32249 361 aa5.35□□□□□ -1.55
USP28-202ENST00000535607 CA7P43166 264 aa5.35□□□□□ -1.55
USP28-202ENST00000535607 MFAP2P55001 183 aa5.35□□□□□ -1.55
USP28-202ENST00000535607 PSG5Q15238 335 aa5.35□□□□□ -1.55
USP28-202ENST00000535607 TNXAQ16473 311 aa5.35□□□□□ -1.55
USP28-202ENST00000535607 MPV17L2Q567V2 206 aa5.35□□□□□ -1.55
USP28-202ENST00000535607 MIC13Q5XKP0 118 aa5.35□□□□□ -1.55
USP28-202ENST00000535607 FA2HQ7L5A8 372 aa5.35□□□□□ -1.55
USP28-202ENST00000535607 FAM19A2Q8N3H0 131 aa5.35□□□□□ -1.55
USP28-202ENST00000535607 NHLRC2Q8NBF2 726 aa5.35□□□□□ -1.55
USP28-202ENST00000535607 STXBP6Q8NFX7 210 aa5.35□□□□□ -1.55
USP28-202ENST00000535607 OR1L4Q8NGR5 311 aa5.35□□□□□ -1.55
USP28-202ENST00000535607 OR1N2Q8NGR9 330 aa5.35□□□□□ -1.55
USP28-202ENST00000535607 MPLKIPQ8TAP9 179 aa5.35□□□□□ -1.55
USP28-202ENST00000535607 ADTRPQ96IZ2 230 aa5.35□□□□□ -1.55
USP28-202ENST00000535607 MGST2Q99735 147 aa5.35□□□□□ -1.55
USP28-202ENST00000535607 SRXN1Q9BYN0 137 aa5.35□□□□□ -1.55
USP28-202ENST00000535607 TNFRSF19Q9NS68 423 aa5.35□□□□□ -1.55
USP28-202ENST00000535607 ABI3Q9P2A4 366 aa5.35□□□□□ -1.55
USP28-202ENST00000535607 CLCF1Q9UBD9 225 aa5.35□□□□□ -1.55
USP28-202ENST00000535607 B4GALT7Q9UBV7 327 aa5.35□□□□□ -1.55
USP28-202ENST00000535607 RNF24Q9Y225 148 aa5.35□□□□□ -1.55
USP28-202ENST00000535607 TEX50A0A1B0GTY4 177 aa5.34□□□□□ -1.55
USP28-202ENST00000535607 A0A1B0GW15 77 aa5.34□□□□□ -1.55
USP28-202ENST00000535607 C7orf71A4D174 169 aa5.34□□□□□ -1.55
USP28-202ENST00000535607 FAM231BA6NCW3 169 aa5.34□□□□□ -1.55
USP28-202ENST00000535607 TMEM8BA6NDV4 472 aa5.34□□□□□ -1.55
USP28-202ENST00000535607 C17orf98A8MV24 154 aa5.34□□□□□ -1.55
USP28-202ENST00000535607 A8MWL6 223 aa5.34□□□□□ -1.55
USP28-202ENST00000535607 F2Z2F3 143 aa5.34□□□□□ -1.55
USP28-202ENST00000535607 G3V4G9 280 aa5.34□□□□□ -1.55
USP28-202ENST00000535607 M0QZ24 198 aa5.34□□□□□ -1.55
USP28-202ENST00000535607 CXCL13O43927 109 aa5.34□□□□□ -1.55
USP28-202ENST00000535607 SS18L1O75177 396 aaPredicted RBP5.34□□□□□ -1.55
USP28-202ENST00000535607 WISP2O76076 250 aa5.34□□□□□ -1.55
USP28-202ENST00000535607 APOA2P02652 100 aa5.34□□□□□ -1.55
USP28-202ENST00000535607 IGLC1P0CG04 106 aa5.34□□□□□ -1.55
USP28-202ENST00000535607 C8orf88P0DMB2 117 aa5.34□□□□□ -1.55
USP28-202ENST00000535607 CA6P23280 308 aa5.34□□□□□ -1.55
USP28-202ENST00000535607 CSN1S1P47710 185 aa5.34□□□□□ -1.55
USP28-202ENST00000535607 HBBP68871 147 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms