RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 ARL2-SNX15V9GYD0 113 aa10.86□□□□□ -0.67
HDAC4-214ENST00000535493 TTC28Q96AY4 2481 aa10.86□□□□□ -0.67
HDAC4-214ENST00000535493 LOC105371242A0A075B767 164 aa10.86□□□□□ -0.67
HDAC4-214ENST00000535493 COX7A2P2O60397 106 aa10.86□□□□□ -0.67
HDAC4-214ENST00000535493 KIR2DS2P43631 304 aa10.86□□□□□ -0.67
HDAC4-214ENST00000535493 UBE2G1P62253 170 aa10.86□□□□□ -0.67
HDAC4-214ENST00000535493 RPRMLQ8N4K4 120 aa10.86□□□□□ -0.67
HDAC4-214ENST00000535493 FDCSPQ8NFU4 85 aa10.86□□□□□ -0.67
HDAC4-214ENST00000535493 PAXXQ9BUH6 204 aa10.86□□□□□ -0.67
HDAC4-214ENST00000535493 BET1LQ9NYM9 111 aa10.86□□□□□ -0.67
HDAC4-214ENST00000535493 PRNDQ9UKY0 176 aa10.86□□□□□ -0.67
HDAC4-214ENST00000535493 TRAV9-2A0A087WT02 112 aa10.85□□□□□ -0.67
HDAC4-214ENST00000535493 PEX7O00628 323 aa10.85□□□□□ -0.67
HDAC4-214ENST00000535493 CD69Q07108 199 aa10.85□□□□□ -0.67
HDAC4-214ENST00000535493 ZNF329Q86UD4 541 aa10.85□□□□□ -0.67
HDAC4-214ENST00000535493 TMEM178AQ8NBL3 297 aa10.85□□□□□ -0.67
HDAC4-214ENST00000535493 HARBI1Q96MB7 349 aa10.85□□□□□ -0.67
HDAC4-214ENST00000535493 MRPL20Q9BYC9 149 aaKnown RBP10.85□□□□□ -0.67
HDAC4-214ENST00000535493 SNAI2O43623 268 aa10.85□□□□□ -0.67
HDAC4-214ENST00000535493 TCTAP57738 103 aa10.85□□□□□ -0.67
HDAC4-214ENST00000535493 MBNL2Q5VZF2 373 aaKnown RBP10.85□□□□□ -0.67
HDAC4-214ENST00000535493 C22orf34Q6ZV56 151 aa10.85□□□□□ -0.67
HDAC4-214ENST00000535493 OR5B3Q8NH48 314 aa10.85□□□□□ -0.67
HDAC4-214ENST00000535493 MBD6Q96DN6 1003 aa10.85□□□□□ -0.67
HDAC4-214ENST00000535493 LOXL4Q96JB6 756 aa10.85□□□□□ -0.67
HDAC4-214ENST00000535493 PGLYRP4Q96LB8 373 aa10.85□□□□□ -0.67
HDAC4-214ENST00000535493 COMMD5Q9GZQ3 224 aa10.85□□□□□ -0.67
HDAC4-214ENST00000535493 LOC102724200A0A096LPH7 203 aaPredicted RBP10.84□□□□□ -0.67
HDAC4-214ENST00000535493 IGHV2-26A0A0B4J1V2 119 aa10.84□□□□□ -0.67
HDAC4-214ENST00000535493 PSMB11A5LHX3 300 aa10.84□□□□□ -0.67
HDAC4-214ENST00000535493 NKX6-3A6NJ46 265 aa10.84□□□□□ -0.67
HDAC4-214ENST00000535493 CCL3L1P16619 93 aa10.84□□□□□ -0.67
HDAC4-214ENST00000535493 UBE2V1Q13404 147 aa10.84□□□□□ -0.67
HDAC4-214ENST00000535493 VAMP3Q15836 100 aa10.84□□□□□ -0.67
HDAC4-214ENST00000535493 CR1LQ2VPA4 569 aa10.84□□□□□ -0.67
HDAC4-214ENST00000535493 ETFRF1Q6IPR1 90 aa10.84□□□□□ -0.67
HDAC4-214ENST00000535493 ZNF738Q8NE65 137 aa10.84□□□□□ -0.67
HDAC4-214ENST00000535493 ORAOV1Q8WV07 137 aa10.84□□□□□ -0.67
HDAC4-214ENST00000535493 CSN3P07498 182 aa10.84□□□□□ -0.67
HDAC4-214ENST00000535493 WT1-ASQ06250 92 aa10.84□□□□□ -0.67
HDAC4-214ENST00000535493 FOXE3Q13461 319 aa10.84□□□□□ -0.67
HDAC4-214ENST00000535493 C10orf113Q5VZT2 155 aa10.84□□□□□ -0.67
HDAC4-214ENST00000535493 HCP5Q6MZN7 132 aa10.84□□□□□ -0.67
HDAC4-214ENST00000535493 LINC00305Q7Z4B0 112 aa10.84□□□□□ -0.67
HDAC4-214ENST00000535493 OR8B3Q8NGG8 313 aa10.84□□□□□ -0.67
HDAC4-214ENST00000535493 GSX1Q9H4S2 264 aaPredicted RBP10.84□□□□□ -0.67
HDAC4-214ENST00000535493 WASHC3Q9Y3C0 194 aa10.84□□□□□ -0.67
HDAC4-214ENST00000535493 TRAV8-1A0A0A6YYK1 113 aa10.83□□□□□ -0.68
HDAC4-214ENST00000535493 OR4C46A6NHA9 309 aa10.83□□□□□ -0.68
HDAC4-214ENST00000535493 H0YJW9 148 aa10.83□□□□□ -0.68
HDAC4-214ENST00000535493 DLX1P56177 255 aa10.83□□□□□ -0.68
HDAC4-214ENST00000535493 SSX8Q7RTT4 187 aa10.83□□□□□ -0.68
HDAC4-214ENST00000535493 OR4C5Q8NGB2 326 aa10.83□□□□□ -0.68
HDAC4-214ENST00000535493 PGPA6NDG6 321 aa10.83□□□□□ -0.68
HDAC4-214ENST00000535493 IGLV1-44P01699 117 aa10.83□□□□□ -0.68
HDAC4-214ENST00000535493 SLC25A5P05141 298 aaKnown RBP10.83□□□□□ -0.68
HDAC4-214ENST00000535493 CCL8P80075 99 aa10.83□□□□□ -0.68
HDAC4-214ENST00000535493 GUSBP1Q15486 140 aa10.83□□□□□ -0.68
HDAC4-214ENST00000535493 BHLHA15Q7RTS1 189 aaPredicted RBP10.83□□□□□ -0.68
HDAC4-214ENST00000535493 OR1B1Q8NGR6 318 aa10.83□□□□□ -0.68
HDAC4-214ENST00000535493 RITA1Q96K30 269 aa10.83□□□□□ -0.68
HDAC4-214ENST00000535493 SAP30LQ9HAJ7 183 aa10.83□□□□□ -0.68
HDAC4-214ENST00000535493 ZNF71Q9NQZ8 489 aaPredicted RBP10.83□□□□□ -0.68
HDAC4-214ENST00000535493 TPSG1Q9NRR2 321 aa10.83□□□□□ -0.68
HDAC4-214ENST00000535493 AKAP13Q12802 2813 aa10.82□□□□□ -0.68
HDAC4-214ENST00000535493 IGHV3-72A0A0B4J1Y9 119 aa10.82□□□□□ -0.68
HDAC4-214ENST00000535493 IGLC7A0M8Q6 106 aa10.82□□□□□ -0.68
HDAC4-214ENST00000535493 CBY3A6NI87 242 aa10.82□□□□□ -0.68
HDAC4-214ENST00000535493 NUDT3O95989 172 aa10.82□□□□□ -0.68
HDAC4-214ENST00000535493 RTL8BQ17RB0 113 aa10.82□□□□□ -0.68
HDAC4-214ENST00000535493 FBLN7Q53RD9 439 aa10.82□□□□□ -0.68
HDAC4-214ENST00000535493 C2orf83Q53S99 150 aa10.82□□□□□ -0.68
HDAC4-214ENST00000535493 UBALD2Q8IYN6 164 aa10.82□□□□□ -0.68
HDAC4-214ENST00000535493 LHBP01229 141 aa10.82□□□□□ -0.68
HDAC4-214ENST00000535493 KLF3P57682 345 aaPredicted RBP10.82□□□□□ -0.68
HDAC4-214ENST00000535493 RBMXL3Q8N7X1 1067 aaKnown RBP10.82□□□□□ -0.68
HDAC4-214ENST00000535493 GTSF1Q8WW33 167 aa10.82□□□□□ -0.68
HDAC4-214ENST00000535493 FXYD5Q96DB9 178 aa10.82□□□□□ -0.68
HDAC4-214ENST00000535493 GRAMD2BQ96HH9 432 aa10.82□□□□□ -0.68
HDAC4-214ENST00000535493 MRPL27Q9P0M9 148 aaKnown RBP10.82□□□□□ -0.68
HDAC4-214ENST00000535493 PNKDQ8N490 385 aa10.81□□□□□ -0.68
HDAC4-214ENST00000535493 ZNF596Q8TC21 504 aa10.81□□□□□ -0.68
HDAC4-214ENST00000535493 C22orf15Q8WYQ4 148 aa10.81□□□□□ -0.68
HDAC4-214ENST00000535493 TMEM70Q9BUB7 260 aa10.81□□□□□ -0.68
HDAC4-214ENST00000535493 DKK4Q9UBT3 224 aa10.81□□□□□ -0.68
HDAC4-214ENST00000535493 ZNF257Q9Y2Q1 563 aa10.81□□□□□ -0.68
HDAC4-214ENST00000535493 MRPS16Q9Y3D3 137 aaKnown RBP10.81□□□□□ -0.68
HDAC4-214ENST00000535493 RAI1Q7Z5J4 1906 aaPredicted RBP10.81□□□□□ -0.68
HDAC4-214ENST00000535493 OR2T8A6NH00 312 aa10.81□□□□□ -0.68
HDAC4-214ENST00000535493 GAFA1Q96PS6 74 aa10.81□□□□□ -0.68
HDAC4-214ENST00000535493 SLC25A15Q9Y619 301 aa10.81□□□□□ -0.68
HDAC4-214ENST00000535493 CACNA1BQ00975 2339 aa10.8□□□□□ -0.68
HDAC4-214ENST00000535493 IGKV1D-37A0A075B6S9 117 aa10.8□□□□□ -0.68
HDAC4-214ENST00000535493 IGHV1-24A0A0C4DH33 117 aa10.8□□□□□ -0.68
HDAC4-214ENST00000535493 CGB1A6NKQ9 187 aa10.8□□□□□ -0.68
HDAC4-214ENST00000535493 CD59P13987 128 aa10.8□□□□□ -0.68
HDAC4-214ENST00000535493 COX19Q49B96 90 aa10.8□□□□□ -0.68
HDAC4-214ENST00000535493 FAM120AOSQ5T036 256 aa10.8□□□□□ -0.68
HDAC4-214ENST00000535493 MUC15Q8N387 334 aa10.8□□□□□ -0.68
HDAC4-214ENST00000535493 NDUFA4L2Q9NRX3 87 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 163.8 ms