RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 TMEM200BQ69YZ2 307 aa15.02□□□□□ -0.01
SFSWAP-203ENST00000535236 UNQ6494/PRO21346Q6UXR6 183 aa15.02□□□□□ -0.01
SFSWAP-203ENST00000535236 RCHY1Q96PM5 261 aa15.02□□□□□ -0.01
SFSWAP-203ENST00000535236 MDC1Q14676 2089 aaKnown RBP15.02□□□□□ -0.01
SFSWAP-203ENST00000535236 SCN2AQ99250 2005 aa15.01□□□□□ -0.01
SFSWAP-203ENST00000535236 IGHV4-39P01824 125 aa15.01□□□□□ -0.01
SFSWAP-203ENST00000535236 SCN10AQ9Y5Y9 1956 aa15.01□□□□□ -0.01
SFSWAP-203ENST00000535236 SRRM5B3KS81 715 aa15.01□□□□□ -0.01
SFSWAP-203ENST00000535236 TRAV2A0A0B4J234 112 aa15.01□□□□□ -0.01
SFSWAP-203ENST00000535236 PGPEP1LA6NFU8 196 aa15.01□□□□□ -0.01
SFSWAP-203ENST00000535236 RBBP6Q7Z6E9 1792 aaKnown RBP15.01□□□□□ -0.01
SFSWAP-203ENST00000535236 H3BUX3 64 aa15.01□□□□□ -0.01
SFSWAP-203ENST00000535236 SERF1AO75920 110 aa15.01□□□□□ -0.01
SFSWAP-203ENST00000535236 CD5P06127 495 aa15.01□□□□□ -0.01
SFSWAP-203ENST00000535236 FAM89BQ8N5H3 189 aa15.01□□□□□ -0.01
SFSWAP-203ENST00000535236 MESP1Q9BRJ9 268 aa15.01□□□□□ -0.01
SFSWAP-203ENST00000535236 ZNF319Q9P2F9 582 aa15.01□□□□□ -0.01
SFSWAP-203ENST00000535236 TMEM178BH3BS89 294 aa15□□□□□ -0.01
SFSWAP-203ENST00000535236 CRYGSP22914 178 aa15□□□□□ -0.01
SFSWAP-203ENST00000535236 S100A7L2Q5SY68 101 aa15□□□□□ -0.01
SFSWAP-203ENST00000535236 MTCL1Q9Y4B5 1905 aaKnown RBP15□□□□□ -0.01
SFSWAP-203ENST00000535236 IGHV1-3A0A0C4DH29 117 aa15□□□□□ -0.01
SFSWAP-203ENST00000535236 OOSP1A8MZH6 123 aa15□□□□□ -0.01
SFSWAP-203ENST00000535236 PLNP26678 52 aa15□□□□□ -0.01
SFSWAP-203ENST00000535236 A0A1B0GV90 55 aa15□□□□□ -0.01
SFSWAP-203ENST00000535236 ADMP35318 185 aa15□□□□□ -0.01
SFSWAP-203ENST00000535236 LINC00158P58513 81 aa15□□□□□ -0.01
SFSWAP-203ENST00000535236 GGNQ86UU5 652 aa15□□□□□ -0.01
SFSWAP-203ENST00000535236 NRN1Q9NPD7 142 aa15□□□□□ -0.01
SFSWAP-203ENST00000535236 CKS1BP61024 79 aa15□□□□□ -0.01
SFSWAP-203ENST00000535236 HEPN1Q6WQI6 88 aa15□□□□□ -0.01
SFSWAP-203ENST00000535236 LINC00518Q8N0U6 118 aa15□□□□□ -0.01
SFSWAP-203ENST00000535236 BRD3OSQ6XYD6 125 aa14.99□□□□□ -0.01
SFSWAP-203ENST00000535236 FOXG1P55316 489 aaPredicted RBP14.99□□□□□ -0.01
SFSWAP-203ENST00000535236 ASCL4Q6XD76 172 aa14.99□□□□□ -0.01
SFSWAP-203ENST00000535236 RPL15P61313 204 aaKnown RBP14.99□□□□□ -0.01
SFSWAP-203ENST00000535236 LYPD3O95274 346 aa14.99□□□□□ -0.01
SFSWAP-203ENST00000535236 OR2K2Q8NGT1 345 aa14.99□□□□□ -0.01
SFSWAP-203ENST00000535236 RNF126Q9BV68 326 aa14.99□□□□□ -0.01
SFSWAP-203ENST00000535236 HEATR5BQ9P2D3 2071 aa14.99□□□□□ -0.01
SFSWAP-203ENST00000535236 NPIPB5A8MRT5 1133 aa14.98□□□□□ -0.01
SFSWAP-203ENST00000535236 RPL35AP18077 110 aaKnown RBP14.98□□□□□ -0.01
SFSWAP-203ENST00000535236 A0A0U1RRA0 63 aa14.98□□□□□ -0.01
SFSWAP-203ENST00000535236 SELLP14151 372 aa14.98□□□□□ -0.01
SFSWAP-203ENST00000535236 C10orf55Q5SWW7 151 aa14.98□□□□□ -0.01
SFSWAP-203ENST00000535236 MYOFQ9NZM1 2061 aa14.98□□□□□ -0.01
SFSWAP-203ENST00000535236 IGKV2-40A0A087WW87 121 aaPredicted RBP14.98□□□□□ -0.01
SFSWAP-203ENST00000535236 TRAV5A0A0B4J249 113 aa14.98□□□□□ -0.01
SFSWAP-203ENST00000535236 IGKV2D-40P01614 121 aaPredicted RBP14.98□□□□□ -0.01
SFSWAP-203ENST00000535236 SPSB3Q6PJ21 355 aa14.98□□□□□ -0.01
SFSWAP-203ENST00000535236 C11orf68Q9H3H3 251 aaKnown RBP14.98□□□□□ -0.01
SFSWAP-203ENST00000535236 ANKRD36A6QL64 1941 aa14.98□□□□□ -0.01
SFSWAP-203ENST00000535236 LRRC37AA6NMS7 1700 aa14.98□□□□□ -0.01
SFSWAP-203ENST00000535236 SRSF7Q16629 238 aaKnown RBP eCLIP14.98□□□□□ -0.01
SFSWAP-203ENST00000535236 DTX1Q86Y01 620 aa14.98□□□□□ -0.01
SFSWAP-203ENST00000535236 WDR83OSQ9Y284 106 aa14.98□□□□□ -0.01
SFSWAP-203ENST00000535236 TMEM8BA6NDV4 472 aa14.98□□□□□ -0.01
SFSWAP-203ENST00000535236 ID3Q02535 119 aa14.98□□□□□ -0.01
SFSWAP-203ENST00000535236 LHFPL4Q7Z7J7 247 aa14.98□□□□□ -0.01
SFSWAP-203ENST00000535236 CST9LQ9H4G1 147 aa14.98□□□□□ -0.01
SFSWAP-203ENST00000535236 SPTBP11277 2137 aa14.97□□□□□ -0.01
SFSWAP-203ENST00000535236 CEP290O15078 2479 aa14.97□□□□□ -0.01
SFSWAP-203ENST00000535236 PSCAO43653 123 aa14.97□□□□□ -0.01
SFSWAP-203ENST00000535236 OTOFQ9HC10 1997 aa14.97□□□□□ -0.01
SFSWAP-203ENST00000535236 MORN3Q6PF18 240 aaPredicted RBP14.97□□□□□ -0.01
SFSWAP-203ENST00000535236 RNF5Q99942 180 aa14.97□□□□□ -0.01
SFSWAP-203ENST00000535236 TRGV1A0A0A0MS02 117 aa14.97□□□□□ -0.01
SFSWAP-203ENST00000535236 A0A0G2JNJ9 132 aa14.97□□□□□ -0.01
SFSWAP-203ENST00000535236 NIT1Q86X76 327 aa14.97□□□□□ -0.01
SFSWAP-203ENST00000535236 C5orf30Q96GV9 206 aa14.97□□□□□ -0.01
SFSWAP-203ENST00000535236 NHP2Q9NX24 153 aaKnown RBP14.97□□□□□ -0.01
SFSWAP-203ENST00000535236 Q9UFV3 132 aa14.97□□□□□ -0.01
SFSWAP-203ENST00000535236 TRIOBPQ9H2D6 2365 aa14.97□□□□□ -0.01
SFSWAP-203ENST00000535236 A0A0A6YYD4 124 aa14.97□□□□□ -0.01
SFSWAP-203ENST00000535236 CA1P00915 261 aaPredicted RBP14.97□□□□□ -0.01
SFSWAP-203ENST00000535236 SFTA2Q6UW10 78 aa14.96□□□□□ -0.01
SFSWAP-203ENST00000535236 IGHV3-64A0A075B6Q5 118 aa14.96□□□□□ -0.01
SFSWAP-203ENST00000535236 A0A087WV48 116 aa14.96□□□□□ -0.01
SFSWAP-203ENST00000535236 IGHV3-73A0A0B4J1V6 119 aa14.96□□□□□ -0.01
SFSWAP-203ENST00000535236 IGKCP01834 107 aa14.96□□□□□ -0.01
SFSWAP-203ENST00000535236 PRB4P10163 310 aaPredicted RBP14.96□□□□□ -0.01
SFSWAP-203ENST00000535236 TMEM170AQ8WVE7 144 aa14.96□□□□□ -0.01
SFSWAP-203ENST00000535236 PMS2P5A8MQ11 134 aa14.96□□□□□ -0.01
SFSWAP-203ENST00000535236 NAPSAO96009 420 aa14.96□□□□□ -0.01
SFSWAP-203ENST00000535236 RPL36AP83881 106 aaKnown RBP14.96□□□□□ -0.01
SFSWAP-203ENST00000535236 PAQR4Q8N4S7 273 aaPredicted RBP14.96□□□□□ -0.01
SFSWAP-203ENST00000535236 OCC1Q8TAD7 63 aa14.96□□□□□ -0.01
SFSWAP-203ENST00000535236 TSKUQ8WUA8 353 aa14.96□□□□□ -0.01
SFSWAP-203ENST00000535236 RPL36ALQ969Q0 106 aaKnown RBP14.96□□□□□ -0.01
SFSWAP-203ENST00000535236 TRAV8-2A0A0B4J237 113 aa14.96□□□□□ -0.02
SFSWAP-203ENST00000535236 NRXN2Q9P2S2 1712 aa14.96□□□□□ -0.02
SFSWAP-203ENST00000535236 IGKV1-12A0A0C4DH73 117 aa14.95□□□□□ -0.02
SFSWAP-203ENST00000535236 LINC01549A6NIU2 74 aa14.95□□□□□ -0.02
SFSWAP-203ENST00000535236 M0R1W7 72 aa14.95□□□□□ -0.02
SFSWAP-203ENST00000535236 IGKV1D-12P01611 117 aa14.95□□□□□ -0.02
SFSWAP-203ENST00000535236 PIP4P2Q8N4L2 257 aa14.95□□□□□ -0.02
SFSWAP-203ENST00000535236 TRBV7-1A0A0A6YYK4 115 aa14.95□□□□□ -0.02
SFSWAP-203ENST00000535236 A0A1B0GWJ7 208 aa14.95□□□□□ -0.02
SFSWAP-203ENST00000535236 H3BUT2 72 aa14.95□□□□□ -0.02
SFSWAP-203ENST00000535236 PSG1P11464 419 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms