RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 AQP3Q92482 292 aa2.47□□□□□ -2.01
USP48-215ENST00000534705 PTX4Q96A99 478 aa2.47□□□□□ -2.01
USP48-215ENST00000534705 RPUSD4Q96CM3 377 aaKnown RBP2.47□□□□□ -2.01
USP48-215ENST00000534705 ZFP3Q96NJ6 502 aa2.47□□□□□ -2.01
USP48-215ENST00000534705 OR7D2Q96RA2 312 aa2.47□□□□□ -2.01
USP48-215ENST00000534705 OR8B4Q96RC9 309 aa2.47□□□□□ -2.01
USP48-215ENST00000534705 TP53RKQ96S44 253 aa2.47□□□□□ -2.01
USP48-215ENST00000534705 SDF2Q99470 211 aa2.47□□□□□ -2.01
USP48-215ENST00000534705 PHB2Q99623 299 aa2.47□□□□□ -2.01
USP48-215ENST00000534705 PLA2G12AQ9BZM1 189 aa2.47□□□□□ -2.01
USP48-215ENST00000534705 CST9LQ9H4G1 147 aa2.47□□□□□ -2.01
USP48-215ENST00000534705 PATZ1Q9HBE1 687 aaKnown RBP2.47□□□□□ -2.01
USP48-215ENST00000534705 CLCF1Q9UBD9 225 aa2.47□□□□□ -2.01
USP48-215ENST00000534705 OR5V1Q9UGF6 321 aa2.47□□□□□ -2.01
USP48-215ENST00000534705 ANAPC10Q9UM13 185 aa2.47□□□□□ -2.01
USP48-215ENST00000534705 BOKQ9UMX3 212 aaPredicted RBP2.47□□□□□ -2.01
USP48-215ENST00000534705 FUT9Q9Y231 359 aa2.47□□□□□ -2.01
USP48-215ENST00000534705 MRPS16Q9Y3D3 137 aaKnown RBP2.47□□□□□ -2.01
USP48-215ENST00000534705 USF3Q68DE3 2245 aa2.47□□□□□ -2.01
USP48-215ENST00000534705 ARHGAP32A7KAX9 2087 aa2.46□□□□□ -2.01
USP48-215ENST00000534705 DSCAML1Q8TD84 2053 aa2.46□□□□□ -2.01
USP48-215ENST00000534705 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.46□□□□□ -2.028e-7■■■□□ 17.1
USP48-215ENST00000534705 TGIF2-C20orf24A0A0A6YYL0 155 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 TRAV1-1A0A0B4J248 108 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 LYRM9A8MSI8 78 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 FTCDNL1E5RQL4 147 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 CORTO00230 105 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 DCTN6O00399 190 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 HMGN4O00479 90 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 CYB5BO43169 146 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 ARL6IP5O75915 188 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 HBE1P02100 147 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 HSPB1P04792 205 aaKnown RBP2.46□□□□□ -2.02
USP48-215ENST00000534705 REG1AP05451 166 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 TACSTD2P09758 323 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 PGA4P0DJD7 388 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 PGA5P0DJD9 388 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 GTF2F2P13984 249 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 RPS4Y1P22090 263 aaKnown RBP2.46□□□□□ -2.02
USP48-215ENST00000534705 CDK2P24941 298 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 OPRM1P35372 400 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 ACVR1BP36896 505 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 OR1E2P47887 323 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 RPL29P47914 159 aaKnown RBP2.46□□□□□ -2.02
USP48-215ENST00000534705 POLR2HP52434 150 aaKnown RBP2.46□□□□□ -2.02
USP48-215ENST00000534705 DSCR4P56555 118 aaPredicted RBP2.46□□□□□ -2.02
USP48-215ENST00000534705 YPEL3P61236 119 aaPredicted RBP2.46□□□□□ -2.02
USP48-215ENST00000534705 RPL19P84098 196 aaKnown RBP2.46□□□□□ -2.02
USP48-215ENST00000534705 ZNF117Q03924 483 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 ZNF92Q03936 586 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 ZNF616Q08AN1 781 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 OR7A5Q15622 319 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 ZNF141Q15928 474 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 RPEL1Q2QD12 228 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 PLPPR5Q32ZL2 321 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 ARHGAP11BQ3KRB8 267 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 TDRG1Q3Y452 100 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 FBXL19-AS1Q494R0 122 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 ZNF684Q5T5D7 378 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 CPTPQ5TA50 214 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 TMED4Q7Z7H5 227 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 ZNF429Q86V71 674 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 ZNF101Q8IZC7 436 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 ZNF738Q8NE65 137 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 OR52L1Q8NGH7 329 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 OR4D11Q8NGI4 311 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 VN1R17PQ8TDU5 208 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 GPR119Q8TDV5 335 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 TNFAIP8L1Q8WVP5 186 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 SEH1LQ96EE3 360 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 NEURL3Q96EH8 262 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 CPNE2Q96FN4 548 aaPredicted RBP2.46□□□□□ -2.02
USP48-215ENST00000534705 S100A16Q96FQ6 103 aaKnown RBP2.46□□□□□ -2.02
USP48-215ENST00000534705 SLC35G5Q96KT7 338 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 C9orf85Q96MD7 179 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 OR2V2Q96R30 315 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 GINS3Q9BRX5 216 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 TMEM59Q9BXS4 323 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 OR51I1Q9H343 314 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 ISG20L2Q9H9L3 353 aaKnown RBP2.46□□□□□ -2.02
USP48-215ENST00000534705 BCL2L10Q9HD36 194 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 CMC2Q9NRP2 79 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 LYRM2Q9NU23 88 aaPredicted RBP2.46□□□□□ -2.02
USP48-215ENST00000534705 NECAP2Q9NVZ3 263 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 TVP23BQ9NYZ1 205 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 COMMD9Q9P000 198 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 GSKIPQ9P0R6 139 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 MRM2Q9UI43 246 aaKnown RBP2.46□□□□□ -2.02
USP48-215ENST00000534705 URGCP-MRPS24S4R325 110 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 CUBNO60494 3623 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 DYSFO75923 2080 aa2.46□□□□□ -2.02
USP48-215ENST00000534705 ABCA1O95477 2261 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 WNK2Q9Y3S1 2297 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 NSD1Q96L73 2696 aaPredicted RBP2.45□□□□□ -2.02
USP48-215ENST00000534705 A0A087WUU8 490 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 IGHV1-69-2A0A0G2JMI3 117 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 A0A0J9YW62 118 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 PRSS37A4D1T9 235 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 TMEM189A5PLL7 270 aa2.45□□□□□ -2.02
USP48-215ENST00000534705 OR6C6A6NF89 314 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms