RNA–Protein interactions for RNA: ENST00000534633.5

USF1-211, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-211ENST00000534633 TMEM50AO95807 157 aa9.33□□□□□ -0.92
USF1-211ENST00000534633 HTR2BP41595 481 aa9.33□□□□□ -0.92
USF1-211ENST00000534633 APOC4P55056 127 aa9.33□□□□□ -0.92
USF1-211ENST00000534633 DEFA1P59665 94 aa9.33□□□□□ -0.92
USF1-211ENST00000534633 DEFA3P59666 94 aa9.33□□□□□ -0.92
USF1-211ENST00000534633 PLET1Q6UQ28 207 aa9.33□□□□□ -0.92
USF1-211ENST00000534633 Q6ZWC4 215 aa9.33□□□□□ -0.92
USF1-211ENST00000534633 PINX1Q96BK5 328 aaKnown RBP9.33□□□□□ -0.92
USF1-211ENST00000534633 SPAG8Q99932 426 aaPredicted RBP9.33□□□□□ -0.92
USF1-211ENST00000534633 ZNF436Q9C0F3 470 aaPredicted RBP9.33□□□□□ -0.92
USF1-211ENST00000534633 ENY2Q9NPA8 101 aa9.33□□□□□ -0.92
USF1-211ENST00000534633 C21orf62Q9NYP8 219 aa9.33□□□□□ -0.92
USF1-211ENST00000534633 CACFD1Q9UGQ2 172 aa9.33□□□□□ -0.92
USF1-211ENST00000534633 PLECQ15149 4684 aaKnown RBP9.32□□□□□ -0.92
USF1-211ENST00000534633 OR2T8A6NH00 312 aa9.32□□□□□ -0.92
USF1-211ENST00000534633 UBE2CO00762 179 aa9.32□□□□□ -0.92
USF1-211ENST00000534633 CYB5BO43169 146 aa9.32□□□□□ -0.92
USF1-211ENST00000534633 TGOLN2O43493 480 aa9.32□□□□□ -0.92
USF1-211ENST00000534633 LY6G6CO95867 125 aa9.32□□□□□ -0.92
USF1-211ENST00000534633 IFNA21P01568 189 aa9.32□□□□□ -0.92
USF1-211ENST00000534633 FCGR2BP31994 310 aaPredicted RBP9.32□□□□□ -0.92
USF1-211ENST00000534633 BMI1P35226 326 aa9.32□□□□□ -0.92
USF1-211ENST00000534633 SUB1P53999 127 aaKnown RBP eCLIP9.32□□□□□ -0.92
USF1-211ENST00000534633 PAX9P55771 341 aa9.32□□□□□ -0.92
USF1-211ENST00000534633 POLR2GP62487 172 aaKnown RBP eCLIP9.32□□□□□ -0.92
USF1-211ENST00000534633 IL15RAQ13261 267 aa9.32□□□□□ -0.92
USF1-211ENST00000534633 IAH1Q2TAA2 248 aaPredicted RBP9.32□□□□□ -0.92
USF1-211ENST00000534633 ZBTB8BQ8NAP8 495 aaPredicted RBP9.32□□□□□ -0.92
USF1-211ENST00000534633 SLC24A4Q8NFF2 622 aa9.32□□□□□ -0.92
USF1-211ENST00000534633 ATP6V0BQ99437 205 aa9.32□□□□□ -0.92
USF1-211ENST00000534633 U3KQ87 197 aa9.32□□□□□ -0.92
USF1-211ENST00000534633 IGHV3-35A0A0C4DH35 117 aa9.31□□□□□ -0.92
USF1-211ENST00000534633 A0A0J9YWU9 116 aa9.31□□□□□ -0.92
USF1-211ENST00000534633 C15orf62A8K5M9 175 aa9.31□□□□□ -0.92
USF1-211ENST00000534633 SNRPGP15A8MWD9 76 aa9.31□□□□□ -0.92
USF1-211ENST00000534633 TSPAN4O14817 238 aa9.31□□□□□ -0.92
USF1-211ENST00000534633 SPRY2O43597 315 aa9.31□□□□□ -0.92
USF1-211ENST00000534633 SYNGR2O43760 224 aa9.31□□□□□ -0.92
USF1-211ENST00000534633 IAPPP10997 89 aa9.31□□□□□ -0.92
USF1-211ENST00000534633 PMS2P11Q13670 270 aa9.31□□□□□ -0.92
USF1-211ENST00000534633 TMEM190Q8WZ59 177 aa9.31□□□□□ -0.92
USF1-211ENST00000534633 KIR2DL5BA0A0G2JN68 375 aa9.3□□□□□ -0.92
USF1-211ENST00000534633 KIR2DL5BA0A0G2JPC4 375 aa9.3□□□□□ -0.92
USF1-211ENST00000534633 WRBO00258 174 aa9.3□□□□□ -0.92
USF1-211ENST00000534633 IFNA10P01566 189 aa9.3□□□□□ -0.92
USF1-211ENST00000534633 MBPP02686 304 aaPredicted RBP9.3□□□□□ -0.92
USF1-211ENST00000534633 ATF4P18848 351 aaPredicted RBP9.3□□□□□ -0.92
USF1-211ENST00000534633 NPY1RP25929 384 aa9.3□□□□□ -0.92
USF1-211ENST00000534633 NKX2-1P43699 371 aaPredicted RBP9.3□□□□□ -0.92
USF1-211ENST00000534633 MFAP4P55083 255 aa9.3□□□□□ -0.92
USF1-211ENST00000534633 DEFB135Q30KP9 77 aa9.3□□□□□ -0.92
USF1-211ENST00000534633 Q56UQ5 140 aa9.3□□□□□ -0.92
USF1-211ENST00000534633 LAMTOR1Q6IAA8 161 aa9.3□□□□□ -0.92
USF1-211ENST00000534633 PRSS54Q6PEW0 395 aa9.3□□□□□ -0.92
USF1-211ENST00000534633 SPSB3Q6PJ21 355 aa9.3□□□□□ -0.92
USF1-211ENST00000534633 KIR2DL5AQ8N109 375 aa9.3□□□□□ -0.92
USF1-211ENST00000534633 UBAC2Q8NBM4 344 aa9.3□□□□□ -0.92
USF1-211ENST00000534633 KIR2DL5BQ8NHK3 375 aa9.3□□□□□ -0.92
USF1-211ENST00000534633 RNASEH2CQ8TDP1 164 aaKnown RBP9.3□□□□□ -0.92
USF1-211ENST00000534633 BSCL2Q96G97 398 aaPredicted RBP9.3□□□□□ -0.92
USF1-211ENST00000534633 TXN2Q99757 166 aa9.3□□□□□ -0.92
USF1-211ENST00000534633 DAZ1Q9NQZ3 744 aaKnown RBP9.3□□□□□ -0.92
USF1-211ENST00000534633 GSKIPQ9P0R6 139 aa9.3□□□□□ -0.92
USF1-211ENST00000534633 FRAS1Q86XX4 4008 aa9.3□□□□□ -0.92
USF1-211ENST00000534633 PRSS46E5RG02 174 aa9.29□□□□□ -0.92
USF1-211ENST00000534633 PRAF2O60831 178 aa9.29□□□□□ -0.92
USF1-211ENST00000534633 PTTG1O95997 202 aa9.29□□□□□ -0.92
USF1-211ENST00000534633 ATP5IP56385 69 aaPredicted RBP9.29□□□□□ -0.92
USF1-211ENST00000534633 EWSR1Q01844 656 aaKnown RBP eCLIP9.29□□□□□ -0.92
USF1-211ENST00000534633 CEMP1Q6PRD7 247 aaPredicted RBP9.29□□□□□ -0.92
USF1-211ENST00000534633 STPG3Q8N7X2 389 aa9.29□□□□□ -0.92
USF1-211ENST00000534633 OR4X1Q8NH49 305 aa9.29□□□□□ -0.92
USF1-211ENST00000534633 RNF183Q96D59 192 aa9.29□□□□□ -0.92
USF1-211ENST00000534633 C11orf1Q9H5F2 150 aa9.29□□□□□ -0.92
USF1-211ENST00000534633 UBQLN2Q9UHD9 624 aa9.29□□□□□ -0.92
USF1-211ENST00000534633 RCL1Q9Y2P8 373 aaKnown RBP9.29□□□□□ -0.92
USF1-211ENST00000534633 KLK5Q9Y337 293 aaPredicted RBP9.29□□□□□ -0.92
USF1-211ENST00000534633 C7orf66A4D0T2 115 aa9.28□□□□□ -0.92
USF1-211ENST00000534633 OR4C46A6NHA9 309 aa9.28□□□□□ -0.92
USF1-211ENST00000534633 PMS2P5A8MQ11 134 aa9.28□□□□□ -0.92
USF1-211ENST00000534633 FAM25EA8MYX2 175 aa9.28□□□□□ -0.92
USF1-211ENST00000534633 CORTO00230 105 aa9.28□□□□□ -0.92
USF1-211ENST00000534633 NDUFA4O00483 81 aa9.28□□□□□ -0.92
USF1-211ENST00000534633 MED6O75586 246 aa9.28□□□□□ -0.92
USF1-211ENST00000534633 SIX6O95475 246 aa9.28□□□□□ -0.92
USF1-211ENST00000534633 OPRK1P41145 380 aa9.28□□□□□ -0.92
USF1-211ENST00000534633 ODF3L2Q3SX64 289 aa9.28□□□□□ -0.92
USF1-211ENST00000534633 TMEM217Q8N7C4 229 aa9.28□□□□□ -0.92
USF1-211ENST00000534633 SMIM8Q96KF7 97 aa9.28□□□□□ -0.92
USF1-211ENST00000534633 C2orf50Q96LR7 162 aa9.28□□□□□ -0.92
USF1-211ENST00000534633 GPN1Q9HCN4 374 aaPredicted RBP9.28□□□□□ -0.92
USF1-211ENST00000534633 KMT2AQ03164 3969 aa9.27□□□□□ -0.92
USF1-211ENST00000534633 IGHV3OR16-8A0A075B7F1 116 aa9.27□□□□□ -0.93
USF1-211ENST00000534633 C5orf51A6NDU8 294 aa9.27□□□□□ -0.93
USF1-211ENST00000534633 H3BP45 60 aa9.27□□□□□ -0.93
USF1-211ENST00000534633 K7EMT4 169 aa9.27□□□□□ -0.93
USF1-211ENST00000534633 SSSCA1O60232 199 aa9.27□□□□□ -0.93
USF1-211ENST00000534633 CLN5O75503 358 aa9.27□□□□□ -0.93
USF1-211ENST00000534633 IGKV1-17P01599 117 aa9.27□□□□□ -0.93
USF1-211ENST00000534633 NPBWR1P48145 328 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms