RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 CMTM2Q8TAZ6 248 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 FNDC9Q8TBE3 224 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 TWIST2Q8WVJ9 160 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 GEMIN6Q8WXD5 167 aaKnown RBP2.64□□□□□ -1.99
CSMD3-210ENST00000534172 DERL3Q96Q80 235 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 PDCD1LG2Q9BQ51 273 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 GGTLC1Q9BX51 225 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 OR2D2Q9H210 308 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 MAP1LC3AQ9H492 121 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 ST20Q9HBF5 79 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 CYTL1Q9NRR1 136 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 ABRACLQ9P1F3 81 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 AK3Q9UIJ7 227 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 SOX21Q9Y651 276 aaPredicted RBP2.64□□□□□ -1.99
CSMD3-210ENST00000534172 V9GY05 133 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 ITPR1Q14643 2758 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 ZNF106Q9H2Y7 1883 aaKnown RBP2.64□□□□□ -1.99
CSMD3-210ENST00000534172 GREB1Q4ZG55 1949 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 BPTFQ12830 3046 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 CITO14578 2027 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 MYO9BQ13459 2157 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 DNHD1Q96M86 4753 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 IGHV1OR15-1A0A075B7D0 117 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 hCG_1818297A0A087WSY0 165 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 C7orf71A4D174 169 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 K7N7A8 449 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 NPIPB7O75200 414 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 GCM2O75603 506 aaPredicted RBP2.64□□□□□ -1.99
CSMD3-210ENST00000534172 DUSP14O95147 198 aaKnown RBP2.64□□□□□ -1.99
CSMD3-210ENST00000534172 HLA-DRB1P01911 266 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 PRB1P04280 392 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 ORM2P19652 201 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 AQP1P29972 269 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 P2RX1P51575 399 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 POLR2JP52435 117 aaKnown RBP2.64□□□□□ -1.99
CSMD3-210ENST00000534172 EMP1P54849 157 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 RPL18AQ02543 176 aaKnown RBP2.64□□□□□ -1.99
CSMD3-210ENST00000534172 PRR30Q53SZ7 412 aaPredicted RBP2.64□□□□□ -1.99
CSMD3-210ENST00000534172 UBE2NLQ5JXB2 153 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 DPPA3Q6W0C5 159 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 DNM1P46Q6ZS02 220 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 PPP1R27Q86WC6 154 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 ZNF101Q8IZC7 436 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 OR2A1Q8NGT9 310 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 MBD3L1Q8WWY6 194 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 DDIT4LQ96D03 193 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 SDF2Q99470 211 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 GPR21Q99679 349 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 C19orf24Q9BVV8 132 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 SCRT1Q9BWW7 348 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 ZNF442Q9H7R0 627 aa2.64□□□□□ -1.99
CSMD3-210ENST00000534172 LSM5Q9Y4Y9 91 aaKnown RBP2.64□□□□□ -1.99
CSMD3-210ENST00000534172 NUP98P52948 1817 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 PARP14Q460N5 1801 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 TRAV8-6A0A0B4J262 113 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 TMEM212A6NML5 194 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 ZNF850A8MQ14 1090 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 ZNF727A8MUV8 499 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 H7C1H1 209 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 SYNGR1O43759 233 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 CRLF1O75462 422 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 REG1AP05451 166 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 HPNP05981 417 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 IL3P08700 152 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 LINC00032P0C843 101 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 ZNF93P35789 620 aaPredicted RBP2.63□□□□□ -1.99
CSMD3-210ENST00000534172 CXCL12P48061 93 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 HLA-DRB3P79483 266 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 CXCL6P80162 114 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 TNFAIP6P98066 277 aaPredicted RBP2.63□□□□□ -1.99
CSMD3-210ENST00000534172 PSG7Q13046 419 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 C15orf32Q32M92 178 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 LINC00303Q3SY05 128 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 BVES-AS1Q5T3Y7 98 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 ZNF684Q5T5D7 378 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 OTPQ5XKR4 325 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 FAM19A5Q7Z5A7 132 aaPredicted RBP2.63□□□□□ -1.99
CSMD3-210ENST00000534172 LRP11Q86VZ4 500 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 TEX29Q8N6K0 151 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 OR8B12Q8NGG6 310 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 OR51A4Q8NGJ6 313 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 OR51G1Q8NGK1 321 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 OR2K2Q8NGT1 345 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 OR4A5Q8NH83 315 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 FGF14Q92915 247 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 SPIN2AQ99865 258 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 SPIN2BQ9BPZ2 258 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 CALYQ9NYX4 217 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 ZNF581Q9P0T4 197 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 IER3IP1Q9Y5U9 82 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 ZNF780BQ9Y6R6 833 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 PDCD11Q14690 1871 aaKnown RBP2.63□□□□□ -1.99
CSMD3-210ENST00000534172 IGKV1D-13A0A0B4J2D9 117 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 IGHV3-35A0A0C4DH35 117 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 FAM240AA0A1B0GVK7 77 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 FNDC10F2Z333 226 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 H3BRM9 83 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 M0R1B8 84 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 RER1O15258 196 aa2.63□□□□□ -1.99
CSMD3-210ENST00000534172 DHRS3O75911 302 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms