RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 IGLC1P0CG04 106 aa9.16□□□□□ -0.94
COMMD9-208ENST00000533643 OR10J1P30954 320 aa9.16□□□□□ -0.94
COMMD9-208ENST00000533643 ARL3P36405 182 aa9.16□□□□□ -0.94
COMMD9-208ENST00000533643 ATP6V1FQ16864 119 aa9.16□□□□□ -0.94
COMMD9-208ENST00000533643 VWC2Q2TAL6 325 aa9.16□□□□□ -0.94
COMMD9-208ENST00000533643 SPSB3Q6PJ21 355 aa9.16□□□□□ -0.94
COMMD9-208ENST00000533643 LILRB2Q8N423 598 aa9.16□□□□□ -0.94
COMMD9-208ENST00000533643 THAP8Q8NA92 274 aa9.16□□□□□ -0.94
COMMD9-208ENST00000533643 OR11H1Q8NG94 326 aa9.16□□□□□ -0.94
COMMD9-208ENST00000533643 DPF1Q92782 380 aa9.16□□□□□ -0.94
COMMD9-208ENST00000533643 ZNF414Q96IQ9 312 aa9.16□□□□□ -0.94
COMMD9-208ENST00000533643 TMEM147Q9BVK8 224 aa9.16□□□□□ -0.94
COMMD9-208ENST00000533643 SMIM3Q9BZL3 60 aa9.16□□□□□ -0.94
COMMD9-208ENST00000533643 WFDC1Q9HC57 220 aa9.16□□□□□ -0.94
COMMD9-208ENST00000533643 UQCC1Q9NVA1 299 aa9.16□□□□□ -0.94
COMMD9-208ENST00000533643 GAR1Q9NY12 217 aaKnown RBP9.16□□□□□ -0.94
COMMD9-208ENST00000533643 VWFP04275 2813 aa9.16□□□□□ -0.94
COMMD9-208ENST00000533643 IGKV1OR2-108A0A075B7D4 117 aa9.15□□□□□ -0.94
COMMD9-208ENST00000533643 TRAV30A0A087WSZ9 112 aa9.15□□□□□ -0.94
COMMD9-208ENST00000533643 LINC01619G3V211 115 aa9.15□□□□□ -0.94
COMMD9-208ENST00000533643 GGCTO75223 188 aaKnown RBP9.15□□□□□ -0.94
COMMD9-208ENST00000533643 OR2C1O95371 312 aa9.15□□□□□ -0.94
COMMD9-208ENST00000533643 AP2S1P53680 142 aaPredicted RBP9.15□□□□□ -0.94
COMMD9-208ENST00000533643 AKR1C1Q04828 323 aa9.15□□□□□ -0.94
COMMD9-208ENST00000533643 ZNF616Q08AN1 781 aa9.15□□□□□ -0.94
COMMD9-208ENST00000533643 FHL3Q13643 280 aa9.15□□□□□ -0.94
COMMD9-208ENST00000533643 CLINT1Q14677 625 aa9.15□□□□□ -0.94
COMMD9-208ENST00000533643 TIGITQ495A1 244 aa9.15□□□□□ -0.94
COMMD9-208ENST00000533643 TREML4Q6UXN2 200 aa9.15□□□□□ -0.94
COMMD9-208ENST00000533643 TMEM144Q7Z5S9 345 aa9.15□□□□□ -0.94
COMMD9-208ENST00000533643 MFFQ9GZY8 342 aa9.15□□□□□ -0.94
COMMD9-208ENST00000533643 NPVFQ9HCQ7 196 aa9.15□□□□□ -0.94
COMMD9-208ENST00000533643 FBXL17Q9UF56 701 aa9.15□□□□□ -0.94
COMMD9-208ENST00000533643 IGHV3-35A0A0C4DH35 117 aa9.14□□□□□ -0.95
COMMD9-208ENST00000533643 NUPL2O15504 423 aaKnown RBP9.14□□□□□ -0.95
COMMD9-208ENST00000533643 PFDN1O60925 122 aa9.14□□□□□ -0.95
COMMD9-208ENST00000533643 CXCL2P19875 107 aa9.14□□□□□ -0.95
COMMD9-208ENST00000533643 HOXD3P31249 432 aaPredicted RBP9.14□□□□□ -0.95
COMMD9-208ENST00000533643 MYCNOSP40205 109 aa9.14□□□□□ -0.95
COMMD9-208ENST00000533643 SLURP1P55000 103 aa9.14□□□□□ -0.95
COMMD9-208ENST00000533643 OR2F1Q13607 317 aa9.14□□□□□ -0.95
COMMD9-208ENST00000533643 ZFP69Q49AA0 526 aa9.14□□□□□ -0.95
COMMD9-208ENST00000533643 TRGV9Q99603 122 aa9.14□□□□□ -0.95
COMMD9-208ENST00000533643 ATP5SQ99766 215 aa9.14□□□□□ -0.95
COMMD9-208ENST00000533643 WDR83OSQ9Y284 106 aa9.14□□□□□ -0.95
COMMD9-208ENST00000533643 LSM4Q9Y4Z0 139 aaKnown RBP9.14□□□□□ -0.95
COMMD9-208ENST00000533643 UBE2L5PA0A1B0GUS4 154 aa9.13□□□□□ -0.95
COMMD9-208ENST00000533643 ZFP92A6NM28 416 aa9.13□□□□□ -0.95
COMMD9-208ENST00000533643 TSPAN15O95858 294 aa9.13□□□□□ -0.95
COMMD9-208ENST00000533643 ZP3P21754 424 aa9.13□□□□□ -0.95
COMMD9-208ENST00000533643 EIF2B2P49770 351 aaKnown RBP9.13□□□□□ -0.95
COMMD9-208ENST00000533643 YPEL3P61236 119 aaPredicted RBP9.13□□□□□ -0.95
COMMD9-208ENST00000533643 ZNF90Q03938 601 aa9.13□□□□□ -0.95
COMMD9-208ENST00000533643 KLF5Q13887 457 aaPredicted RBP9.13□□□□□ -0.95
COMMD9-208ENST00000533643 RPEL1Q2QD12 228 aa9.13□□□□□ -0.95
COMMD9-208ENST00000533643 TEPPQ6URK8 271 aa9.13□□□□□ -0.95
COMMD9-208ENST00000533643 GPHB5Q86YW7 130 aa9.13□□□□□ -0.95
COMMD9-208ENST00000533643 KCNRGQ8N5I3 272 aa9.13□□□□□ -0.95
COMMD9-208ENST00000533643 OR4F17Q8NGA8 305 aa9.13□□□□□ -0.95
COMMD9-208ENST00000533643 HYLS1Q96M11 299 aa9.13□□□□□ -0.95
COMMD9-208ENST00000533643 OR4F4Q96R69 305 aa9.13□□□□□ -0.95
COMMD9-208ENST00000533643 A0A0D9SG52 128 aa9.12□□□□□ -0.95
COMMD9-208ENST00000533643 M0QZ24 198 aa9.12□□□□□ -0.95
COMMD9-208ENST00000533643 SCGB2A1O75556 95 aa9.12□□□□□ -0.95
COMMD9-208ENST00000533643 DFFBO76075 338 aa9.12□□□□□ -0.95
COMMD9-208ENST00000533643 RELQ04864 619 aaPredicted RBP9.12□□□□□ -0.95
COMMD9-208ENST00000533643 ZNF345Q14585 488 aa9.12□□□□□ -0.95
COMMD9-208ENST00000533643 LGALSLQ3ZCW2 172 aaPredicted RBP9.12□□□□□ -0.95
COMMD9-208ENST00000533643 FAM106AQ4KMX7 169 aa9.12□□□□□ -0.95
COMMD9-208ENST00000533643 BTNL8Q6UX41 500 aa9.12□□□□□ -0.95
COMMD9-208ENST00000533643 ZNF600Q6ZNG1 722 aa9.12□□□□□ -0.95
COMMD9-208ENST00000533643 TMEM182Q6ZP80 229 aaPredicted RBP9.12□□□□□ -0.95
COMMD9-208ENST00000533643 TMUB2Q71RG4 321 aa9.12□□□□□ -0.95
COMMD9-208ENST00000533643 SPATA3Q8NHX4 192 aa9.12□□□□□ -0.95
COMMD9-208ENST00000533643 DLX4Q92988 240 aaPredicted RBP9.12□□□□□ -0.95
COMMD9-208ENST00000533643 MGST2Q99735 147 aa9.12□□□□□ -0.95
COMMD9-208ENST00000533643 SLC45A2Q9UMX9 530 aa9.12□□□□□ -0.95
COMMD9-208ENST00000533643 NDUFA4O00483 81 aa9.11□□□□□ -0.95
COMMD9-208ENST00000533643 TOMM40O96008 361 aa9.11□□□□□ -0.95
COMMD9-208ENST00000533643 IFNA5P01569 189 aa9.11□□□□□ -0.95
COMMD9-208ENST00000533643 PF4P02776 101 aa9.11□□□□□ -0.95
COMMD9-208ENST00000533643 RD3LP0DJH9 198 aa9.11□□□□□ -0.95
COMMD9-208ENST00000533643 PSG1P11464 419 aa9.11□□□□□ -0.95
COMMD9-208ENST00000533643 FGF7P21781 194 aa9.11□□□□□ -0.95
COMMD9-208ENST00000533643 GATA2P23769 480 aaPredicted RBP9.11□□□□□ -0.95
COMMD9-208ENST00000533643 SYNJ2BPP57105 145 aa9.11□□□□□ -0.95
COMMD9-208ENST00000533643 TOMM20LQ6UXN7 152 aa9.11□□□□□ -0.95
COMMD9-208ENST00000533643 UNQ9165/PRO28630Q6UXU0 137 aa9.11□□□□□ -0.95
COMMD9-208ENST00000533643 CYP2G1PQ6ZSU1 146 aa9.11□□□□□ -0.95
COMMD9-208ENST00000533643 LINC00482Q8N8I6 264 aa9.11□□□□□ -0.95
COMMD9-208ENST00000533643 RCC1LQ96I51 464 aaKnown RBP9.11□□□□□ -0.95
COMMD9-208ENST00000533643 WDR61Q9GZS3 305 aaKnown RBP9.11□□□□□ -0.95
COMMD9-208ENST00000533643 CYTL1Q9NRR1 136 aa9.11□□□□□ -0.95
COMMD9-208ENST00000533643 PUS1Q9Y606 427 aaKnown RBP eCLIP9.11□□□□□ -0.95
COMMD9-208ENST00000533643 WNK1Q9H4A3 2382 aa9.1□□□□□ -0.95
COMMD9-208ENST00000533643 TRRAPQ9Y4A5 3859 aa9.1□□□□□ -0.95
COMMD9-208ENST00000533643 IGHV3OR16-8A0A075B7F1 116 aa9.1□□□□□ -0.95
COMMD9-208ENST00000533643 ZNF320A2RRD8 509 aa9.1□□□□□ -0.95
COMMD9-208ENST00000533643 LGALS9O00182 355 aa9.1□□□□□ -0.95
COMMD9-208ENST00000533643 TAAR5O14804 337 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms