RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 GGTLC1Q9BX51 225 aa6.51□□□□□ -1.37
NEDD8-207ENST00000533242 ACTR3CQ9C0K3 210 aaPredicted RBP6.51□□□□□ -1.37
NEDD8-207ENST00000533242 C15orf61A6NNL5 157 aa6.5□□□□□ -1.37
NEDD8-207ENST00000533242 SEC14L6B5MCN3 397 aa6.5□□□□□ -1.37
NEDD8-207ENST00000533242 IFNA1P01562 189 aa6.5□□□□□ -1.37
NEDD8-207ENST00000533242 PFN1P07737 140 aaKnown RBP6.5□□□□□ -1.37
NEDD8-207ENST00000533242 IGLL1P15814 213 aa6.5□□□□□ -1.37
NEDD8-207ENST00000533242 PSMB3P49720 205 aa6.5□□□□□ -1.37
NEDD8-207ENST00000533242 GNB1P62873 340 aa6.5□□□□□ -1.37
NEDD8-207ENST00000533242 PRSS8Q16651 343 aa6.5□□□□□ -1.37
NEDD8-207ENST00000533242 TMEM241Q24JQ0 296 aa6.5□□□□□ -1.37
NEDD8-207ENST00000533242 PYY3Q5JQD4 70 aa6.5□□□□□ -1.37
NEDD8-207ENST00000533242 SPATA31B1PQ5VZV4 182 aa6.5□□□□□ -1.37
NEDD8-207ENST00000533242 ZNF709Q8N972 641 aa6.5□□□□□ -1.37
NEDD8-207ENST00000533242 ZNF114Q8NC26 417 aa6.5□□□□□ -1.37
NEDD8-207ENST00000533242 CITED2Q99967 270 aaPredicted RBP6.5□□□□□ -1.37
NEDD8-207ENST00000533242 GSN-AS1Q9NRJ2 163 aa6.5□□□□□ -1.37
NEDD8-207ENST00000533242 TMEM242Q9NWH2 141 aa6.5□□□□□ -1.37
NEDD8-207ENST00000533242 IDI2-AS1Q9NZ38 188 aa6.5□□□□□ -1.37
NEDD8-207ENST00000533242 SLC25A10Q9UBX3 287 aaPredicted RBP6.5□□□□□ -1.37
NEDD8-207ENST00000533242 NAT8Q9UHE5 227 aa6.5□□□□□ -1.37
NEDD8-207ENST00000533242 TRBV20OR9-2A0A075B6H5 130 aa6.5□□□□□ -1.37
NEDD8-207ENST00000533242 C11orf94C9JXX5 98 aa6.5□□□□□ -1.37
NEDD8-207ENST00000533242 TMEM250H0YL14 139 aa6.5□□□□□ -1.37
NEDD8-207ENST00000533242 ARL14EPLP0DKL9 152 aa6.5□□□□□ -1.37
NEDD8-207ENST00000533242 CCL3L1P16619 93 aa6.5□□□□□ -1.37
NEDD8-207ENST00000533242 CTAG1AP78358 180 aa6.5□□□□□ -1.37
NEDD8-207ENST00000533242 BSXQ3C1V8 233 aa6.5□□□□□ -1.37
NEDD8-207ENST00000533242 OR5T1Q8NG75 326 aa6.5□□□□□ -1.37
NEDD8-207ENST00000533242 PIFOQ8TCI5 191 aa6.5□□□□□ -1.37
NEDD8-207ENST00000533242 GPR61Q9BZJ8 451 aa6.5□□□□□ -1.37
NEDD8-207ENST00000533242 WNT10AQ9GZT5 417 aa6.5□□□□□ -1.37
NEDD8-207ENST00000533242 TMEM14BQ9NUH8 114 aa6.5□□□□□ -1.37
NEDD8-207ENST00000533242 LSM4Q9Y4Z0 139 aaKnown RBP6.5□□□□□ -1.37
NEDD8-207ENST00000533242 KMT2CQ8NEZ4 4911 aaKnown RBP6.5□□□□□ -1.37
NEDD8-207ENST00000533242 DNAH3Q8TD57 4116 aa6.49□□□□□ -1.37
NEDD8-207ENST00000533242 TRBV24-1A0A075B6N3 115 aa6.49□□□□□ -1.37
NEDD8-207ENST00000533242 TRGV10A0A0A0MS01 117 aa6.49□□□□□ -1.37
NEDD8-207ENST00000533242 TRBV23-1A0A0A0MS06 115 aa6.49□□□□□ -1.37
NEDD8-207ENST00000533242 FAM90A9PA6NNJ1 464 aa6.49□□□□□ -1.37
NEDD8-207ENST00000533242 MBP02144 154 aa6.49□□□□□ -1.37
NEDD8-207ENST00000533242 CT45A6P0DMU7 189 aa6.49□□□□□ -1.37
NEDD8-207ENST00000533242 CT45A5P0DMU8 189 aa6.49□□□□□ -1.37
NEDD8-207ENST00000533242 CT45A7P0DMV0 189 aa6.49□□□□□ -1.37
NEDD8-207ENST00000533242 NDUFB7P17568 137 aa6.49□□□□□ -1.37
NEDD8-207ENST00000533242 CDX1P47902 265 aaPredicted RBP6.49□□□□□ -1.37
NEDD8-207ENST00000533242 ERVK-16P61578 105 aa6.49□□□□□ -1.37
NEDD8-207ENST00000533242 DIAPH2-AS1Q14236 149 aa6.49□□□□□ -1.37
NEDD8-207ENST00000533242 MLANAQ16655 118 aa6.49□□□□□ -1.37
NEDD8-207ENST00000533242 DEFB121Q5J5C9 76 aa6.49□□□□□ -1.37
NEDD8-207ENST00000533242 OR52E5Q8NH55 327 aa6.49□□□□□ -1.37
NEDD8-207ENST00000533242 OR4S2Q8NH73 311 aa6.49□□□□□ -1.37
NEDD8-207ENST00000533242 GGACTQ9BVM4 153 aa6.49□□□□□ -1.37
NEDD8-207ENST00000533242 SEPSECSQ9HD40 501 aaKnown RBP6.49□□□□□ -1.37
NEDD8-207ENST00000533242 PXMP4Q9Y6I8 212 aa6.49□□□□□ -1.37
NEDD8-207ENST00000533242 IGKV1OR2-108A0A075B7D4 117 aa6.49□□□□□ -1.37
NEDD8-207ENST00000533242 CA2P00918 260 aa6.49□□□□□ -1.37
NEDD8-207ENST00000533242 FABP1P07148 127 aa6.49□□□□□ -1.37
NEDD8-207ENST00000533242 RD3LP0DJH9 198 aa6.49□□□□□ -1.37
NEDD8-207ENST00000533242 ACOT6Q3I5F7 207 aaPredicted RBP6.49□□□□□ -1.37
NEDD8-207ENST00000533242 HIST3H2BBQ8N257 126 aa6.49□□□□□ -1.37
NEDD8-207ENST00000533242 OR4X1Q8NH49 305 aa6.49□□□□□ -1.37
NEDD8-207ENST00000533242 B9D2Q9BPU9 175 aa6.49□□□□□ -1.37
NEDD8-207ENST00000533242 HINT2Q9BX68 163 aa6.49□□□□□ -1.37
NEDD8-207ENST00000533242 PRSS22Q9GZN4 317 aa6.49□□□□□ -1.37
NEDD8-207ENST00000533242 MANBALQ9NQG1 85 aa6.49□□□□□ -1.37
NEDD8-207ENST00000533242 WI2-2373I1.2A0A1W2PRP0 233 aa6.48□□□□□ -1.37
NEDD8-207ENST00000533242 E7EUB6 86 aa6.48□□□□□ -1.37
NEDD8-207ENST00000533242 C17orf112F2Z3M2 114 aa6.48□□□□□ -1.37
NEDD8-207ENST00000533242 NDUFB4O95168 129 aa6.48□□□□□ -1.37
NEDD8-207ENST00000533242 OPRK1P41145 380 aa6.48□□□□□ -1.37
NEDD8-207ENST00000533242 REG1BP48304 166 aa6.48□□□□□ -1.37
NEDD8-207ENST00000533242 RAB7AP51149 207 aa6.48□□□□□ -1.37
NEDD8-207ENST00000533242 B2MP61769 119 aa6.48□□□□□ -1.37
NEDD8-207ENST00000533242 CD69Q07108 199 aa6.48□□□□□ -1.37
NEDD8-207ENST00000533242 CST9LP1Q5W188 147 aa6.48□□□□□ -1.37
NEDD8-207ENST00000533242 SLC25A48Q6ZT89 311 aaKnown RBP6.48□□□□□ -1.37
NEDD8-207ENST00000533242 SLC24A4Q8NFF2 622 aa6.48□□□□□ -1.37
NEDD8-207ENST00000533242 LINC00574Q9H8X3 128 aa6.48□□□□□ -1.37
NEDD8-207ENST00000533242 GAB2Q9UQC2 676 aa6.48□□□□□ -1.37
NEDD8-207ENST00000533242 FOXA2Q9Y261 457 aaPredicted RBP6.48□□□□□ -1.37
NEDD8-207ENST00000533242 YTHDF2Q9Y5A9 579 aaKnown RBP6.48□□□□□ -1.37
NEDD8-207ENST00000533242 A6NDX4 124 aa6.48□□□□□ -1.37
NEDD8-207ENST00000533242 ITGB1BP1O14713 200 aa6.48□□□□□ -1.37
NEDD8-207ENST00000533242 S100A9P06702 114 aaKnown RBP6.48□□□□□ -1.37
NEDD8-207ENST00000533242 IL6RP08887 468 aaPredicted RBP6.48□□□□□ -1.37
NEDD8-207ENST00000533242 GATA2P23769 480 aaPredicted RBP6.48□□□□□ -1.37
NEDD8-207ENST00000533242 NPY1RP25929 384 aa6.48□□□□□ -1.37
NEDD8-207ENST00000533242 CHRNA7P36544 502 aa6.48□□□□□ -1.37
NEDD8-207ENST00000533242 GALR1P47211 349 aa6.48□□□□□ -1.37
NEDD8-207ENST00000533242 KRTAP10-11P60412 298 aa6.48□□□□□ -1.37
NEDD8-207ENST00000533242 HSPE1P61604 102 aaKnown RBP6.48□□□□□ -1.37
NEDD8-207ENST00000533242 LINC01551Q86U37 167 aa6.48□□□□□ -1.37
NEDD8-207ENST00000533242 OR10W1Q8NGF6 305 aa6.48□□□□□ -1.37
NEDD8-207ENST00000533242 PYGO2Q9BRQ0 406 aa6.48□□□□□ -1.37
NEDD8-207ENST00000533242 NCOR1P1Q9H4R4 102 aa6.48□□□□□ -1.37
NEDD8-207ENST00000533242 RYR3Q15413 4870 aa6.48□□□□□ -1.37
NEDD8-207ENST00000533242 SCO2A0A1W2PP80 73 aa6.47□□□□□ -1.37
NEDD8-207ENST00000533242 A0A1W2PPV4 95 aa6.47□□□□□ -1.37
NEDD8-207ENST00000533242 H7BYZ3 331 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms