RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 ZNF114Q8NC26 417 aa12.6□□□□□ -0.39
PKP3-209ENST00000533069 BSCL2Q96G97 398 aaPredicted RBP12.6□□□□□ -0.39
PKP3-209ENST00000533069 ZC4H2Q9NQZ6 224 aa12.6□□□□□ -0.39
PKP3-209ENST00000533069 LYRM2Q9NU23 88 aaPredicted RBP12.6□□□□□ -0.39
PKP3-209ENST00000533069 C21orf62Q9NYP8 219 aa12.6□□□□□ -0.39
PKP3-209ENST00000533069 TMEM213A2RRL7 107 aa12.59□□□□□ -0.39
PKP3-209ENST00000533069 IZUMO1RA6ND01 250 aa12.59□□□□□ -0.39
PKP3-209ENST00000533069 CBLN1P23435 193 aa12.59□□□□□ -0.39
PKP3-209ENST00000533069 SNCAP37840 140 aa12.59□□□□□ -0.39
PKP3-209ENST00000533069 ELLP55199 621 aaPredicted RBP12.59□□□□□ -0.39
PKP3-209ENST00000533069 RAB11AP62491 216 aa12.59□□□□□ -0.39
PKP3-209ENST00000533069 BAXQ07812 192 aa12.59□□□□□ -0.39
PKP3-209ENST00000533069 ZNF345Q14585 488 aa12.59□□□□□ -0.39
PKP3-209ENST00000533069 MARC2Q969Z3 335 aa12.59□□□□□ -0.39
PKP3-209ENST00000533069 RNF126Q9BV68 326 aa12.59□□□□□ -0.39
PKP3-209ENST00000533069 MAGT1Q9H0U3 335 aa12.59□□□□□ -0.39
PKP3-209ENST00000533069 C19orf73Q9NVV2 129 aa12.59□□□□□ -0.39
PKP3-209ENST00000533069 GAR1Q9NY12 217 aaKnown RBP12.59□□□□□ -0.39
PKP3-209ENST00000533069 PSENENQ9NZ42 101 aa12.59□□□□□ -0.39
PKP3-209ENST00000533069 UFC1Q9Y3C8 167 aa12.59□□□□□ -0.39
PKP3-209ENST00000533069 STRAPQ9Y3F4 350 aaKnown RBP12.59□□□□□ -0.39
PKP3-209ENST00000533069 SORL1Q92673 2214 aa12.58□□□□□ -0.39
PKP3-209ENST00000533069 FXYD6-FXYD2A0A087WZ82 144 aa12.58□□□□□ -0.4
PKP3-209ENST00000533069 G3V3Q6 166 aa12.58□□□□□ -0.4
PKP3-209ENST00000533069 K7EIM0 57 aa12.58□□□□□ -0.4
PKP3-209ENST00000533069 HNRNPCP07910 306 aaKnown RBP eCLIP12.58□□□□□ -0.4
PKP3-209ENST00000533069 OR2F1Q13607 317 aa12.58□□□□□ -0.4
PKP3-209ENST00000533069 STX12Q86Y82 276 aa12.58□□□□□ -0.4
PKP3-209ENST00000533069 SCARB1Q8WTV0 552 aa12.58□□□□□ -0.4
PKP3-209ENST00000533069 AQP10Q96PS8 301 aa12.58□□□□□ -0.4
PKP3-209ENST00000533069 C11orf1Q9H5F2 150 aa12.58□□□□□ -0.4
PKP3-209ENST00000533069 ZMAT4Q9H898 229 aa12.58□□□□□ -0.4
PKP3-209ENST00000533069 TNFSF18Q9UNG2 199 aa12.58□□□□□ -0.4
PKP3-209ENST00000533069 TENM3Q9P273 2699 aa12.57□□□□□ -0.4
PKP3-209ENST00000533069 OR2T8A6NH00 312 aa12.57□□□□□ -0.4
PKP3-209ENST00000533069 H0YIZ8 118 aa12.57□□□□□ -0.4
PKP3-209ENST00000533069 CORTO00230 105 aa12.57□□□□□ -0.4
PKP3-209ENST00000533069 CAV2P51636 162 aa12.57□□□□□ -0.4
PKP3-209ENST00000533069 UNQ9165/PRO28630Q6UXU0 137 aa12.57□□□□□ -0.4
PKP3-209ENST00000533069 ACOT7LQ6ZUV0 252 aa12.57□□□□□ -0.4
PKP3-209ENST00000533069 SLC24A4Q8NFF2 622 aa12.57□□□□□ -0.4
PKP3-209ENST00000533069 CACNG8Q8WXS5 425 aa12.57□□□□□ -0.4
PKP3-209ENST00000533069 TMEM190Q8WZ59 177 aa12.57□□□□□ -0.4
PKP3-209ENST00000533069 OR5AC2Q9NZP5 309 aa12.57□□□□□ -0.4
PKP3-209ENST00000533069 A0A0D9SG52 128 aa12.56□□□□□ -0.4
PKP3-209ENST00000533069 ZNF785A8K8V0 405 aa12.56□□□□□ -0.4
PKP3-209ENST00000533069 NXPH3O95157 252 aa12.56□□□□□ -0.4
PKP3-209ENST00000533069 IFNA10P01566 189 aa12.56□□□□□ -0.4
PKP3-209ENST00000533069 C8orf88P0DMB2 117 aa12.56□□□□□ -0.4
PKP3-209ENST00000533069 EDN2P20800 178 aa12.56□□□□□ -0.4
PKP3-209ENST00000533069 NPY1RP25929 384 aa12.56□□□□□ -0.4
PKP3-209ENST00000533069 RPL12P30050 165 aaKnown RBP12.56□□□□□ -0.4
PKP3-209ENST00000533069 CD81P60033 236 aa12.56□□□□□ -0.4
PKP3-209ENST00000533069 HBG1P69891 147 aa12.56□□□□□ -0.4
PKP3-209ENST00000533069 HBG2P69892 147 aa12.56□□□□□ -0.4
PKP3-209ENST00000533069 BSXQ3C1V8 233 aa12.56□□□□□ -0.4
PKP3-209ENST00000533069 C2orf83Q53S99 150 aa12.56□□□□□ -0.4
PKP3-209ENST00000533069 Q56UQ5 140 aa12.56□□□□□ -0.4
PKP3-209ENST00000533069 RCHY1Q96PM5 261 aa12.56□□□□□ -0.4
PKP3-209ENST00000533069 MFFQ9GZY8 342 aa12.56□□□□□ -0.4
PKP3-209ENST00000533069 TUBA4BQ9H853 241 aa12.56□□□□□ -0.4
PKP3-209ENST00000533069 MRPL27Q9P0M9 148 aaKnown RBP12.56□□□□□ -0.4
PKP3-209ENST00000533069 IGHV3-21A0A0B4J1V1 117 aa12.55□□□□□ -0.4
PKP3-209ENST00000533069 F8W735 103 aaPredicted RBP12.55□□□□□ -0.4
PKP3-209ENST00000533069 NDUFA4O00483 81 aa12.55□□□□□ -0.4
PKP3-209ENST00000533069 IAPPP10997 89 aa12.55□□□□□ -0.4
PKP3-209ENST00000533069 FCGR2BP31994 310 aaPredicted RBP12.55□□□□□ -0.4
PKP3-209ENST00000533069 SULT1A1P50225 295 aa12.55□□□□□ -0.4
PKP3-209ENST00000533069 PAX9P55771 341 aa12.55□□□□□ -0.4
PKP3-209ENST00000533069 GUCA2BQ16661 112 aa12.55□□□□□ -0.4
PKP3-209ENST00000533069 TM4SF20Q53R12 229 aa12.55□□□□□ -0.4
PKP3-209ENST00000533069 Q5BKY6 102 aa12.55□□□□□ -0.4
PKP3-209ENST00000533069 SPANXN5Q5MJ07 72 aa12.55□□□□□ -0.4
PKP3-209ENST00000533069 TMEM14EPQ6UXP3 125 aa12.55□□□□□ -0.4
PKP3-209ENST00000533069 UBAC2Q8NBM4 344 aa12.55□□□□□ -0.4
PKP3-209ENST00000533069 RNASEH2CQ8TDP1 164 aaKnown RBP12.55□□□□□ -0.4
PKP3-209ENST00000533069 PINX1Q96BK5 328 aaKnown RBP12.55□□□□□ -0.4
PKP3-209ENST00000533069 MISP3Q96FF7 219 aa12.55□□□□□ -0.4
PKP3-209ENST00000533069 TXN2Q99757 166 aa12.55□□□□□ -0.4
PKP3-209ENST00000533069 TM2D3Q9BRN9 247 aa12.55□□□□□ -0.4
PKP3-209ENST00000533069 DAZ1Q9NQZ3 744 aaKnown RBP12.55□□□□□ -0.4
PKP3-209ENST00000533069 MLXQ9UH92 298 aa12.55□□□□□ -0.4
PKP3-209ENST00000533069 STAB2Q8WWQ8 2551 aa12.54□□□□□ -0.4
PKP3-209ENST00000533069 TRAV25A0A0B4J276 109 aa12.54□□□□□ -0.4
PKP3-209ENST00000533069 IGHV3-35A0A0C4DH35 117 aa12.54□□□□□ -0.4
PKP3-209ENST00000533069 SMLR1H3BR10 107 aa12.54□□□□□ -0.4
PKP3-209ENST00000533069 I3L2K1 104 aa12.54□□□□□ -0.4
PKP3-209ENST00000533069 TAAR5O14804 337 aa12.54□□□□□ -0.4
PKP3-209ENST00000533069 ARPC5O15511 151 aa12.54□□□□□ -0.4
PKP3-209ENST00000533069 TMEM50AO95807 157 aa12.54□□□□□ -0.4
PKP3-209ENST00000533069 MFAP4P55083 255 aa12.54□□□□□ -0.4
PKP3-209ENST00000533069 RELQ04864 619 aaPredicted RBP12.54□□□□□ -0.4
PKP3-209ENST00000533069 CD300CQ08708 224 aa12.54□□□□□ -0.4
PKP3-209ENST00000533069 TMEM61Q8N0U2 210 aa12.54□□□□□ -0.4
PKP3-209ENST00000533069 TMEM252Q8N6L7 170 aa12.54□□□□□ -0.4
PKP3-209ENST00000533069 CHRDL1Q9BU40 450 aa12.54□□□□□ -0.4
PKP3-209ENST00000533069 GGACTQ9BVM4 153 aa12.54□□□□□ -0.4
PKP3-209ENST00000533069 NUPL2O15504 423 aaKnown RBP12.53□□□□□ -0.4
PKP3-209ENST00000533069 MT-CO2P00403 227 aa12.53□□□□□ -0.4
PKP3-209ENST00000533069 S100A11P31949 105 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms