RNA–Protein interactions for RNA: ENST00000533064.1

TRIM3-212, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 1,654 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-212ENST00000533064 KLHDC1Q8N7A1 406 aa11.1□□□□□ -0.63
TRIM3-212ENST00000533064 FAM213BQ8TBF2 198 aa11.1□□□□□ -0.63
TRIM3-212ENST00000533064 HRH4Q9H3N8 390 aa11.1□□□□□ -0.63
TRIM3-212ENST00000533064 FNDC4Q9H6D8 234 aaPredicted RBP11.1□□□□□ -0.63
TRIM3-212ENST00000533064 RNF114Q9Y508 228 aa11.1□□□□□ -0.63
TRIM3-212ENST00000533064 IGHV3-21A0A0B4J1V1 117 aa11.09□□□□□ -0.63
TRIM3-212ENST00000533064 A0A1B0GUS0 222 aa11.09□□□□□ -0.63
TRIM3-212ENST00000533064 K7EIM0 57 aa11.09□□□□□ -0.63
TRIM3-212ENST00000533064 NDUFB8O95169 186 aa11.09□□□□□ -0.63
TRIM3-212ENST00000533064 PSMB8P28062 276 aa11.09□□□□□ -0.63
TRIM3-212ENST00000533064 RAB9AP51151 201 aa11.09□□□□□ -0.63
TRIM3-212ENST00000533064 ATP5G2Q06055 141 aa11.09□□□□□ -0.63
TRIM3-212ENST00000533064 ZNF616Q08AN1 781 aa11.09□□□□□ -0.63
TRIM3-212ENST00000533064 IQCF2Q8IXL9 164 aa11.09□□□□□ -0.63
TRIM3-212ENST00000533064 ZNF709Q8N972 641 aa11.09□□□□□ -0.63
TRIM3-212ENST00000533064 OR4X2Q8NGF9 303 aa11.09□□□□□ -0.63
TRIM3-212ENST00000533064 VN1R17PQ8TDU5 208 aa11.09□□□□□ -0.63
TRIM3-212ENST00000533064 ACY3Q96HD9 319 aa11.09□□□□□ -0.63
TRIM3-212ENST00000533064 USMG5Q96IX5 58 aa11.09□□□□□ -0.63
TRIM3-212ENST00000533064 NPCDR1Q9BY65 106 aa11.09□□□□□ -0.63
TRIM3-212ENST00000533064 NPVFQ9HCQ7 196 aa11.09□□□□□ -0.63
TRIM3-212ENST00000533064 CLPSL1A2RUU4 121 aa11.08□□□□□ -0.64
TRIM3-212ENST00000533064 C17orf112F2Z3M2 114 aa11.08□□□□□ -0.64
TRIM3-212ENST00000533064 I3L521 148 aa11.08□□□□□ -0.64
TRIM3-212ENST00000533064 IGHV3-48P01763 117 aa11.08□□□□□ -0.64
TRIM3-212ENST00000533064 MFAP4P55083 255 aa11.08□□□□□ -0.64
TRIM3-212ENST00000533064 DEFA5Q01523 94 aa11.08□□□□□ -0.64
TRIM3-212ENST00000533064 GAMTQ14353 236 aa11.08□□□□□ -0.64
TRIM3-212ENST00000533064 MLANAQ16655 118 aa11.08□□□□□ -0.64
TRIM3-212ENST00000533064 TREML4Q6UXN2 200 aa11.08□□□□□ -0.64
TRIM3-212ENST00000533064 OR5AU1Q8NGC0 362 aa11.08□□□□□ -0.64
TRIM3-212ENST00000533064 EEF1AKMT3Q96AZ1 226 aa11.08□□□□□ -0.64
TRIM3-212ENST00000533064 HAX1O00165 279 aa11.08□□□□□ -0.64
TRIM3-212ENST00000533064 SCGB2A1O75556 95 aa11.08□□□□□ -0.64
TRIM3-212ENST00000533064 NPBWR1P48145 328 aa11.08□□□□□ -0.64
TRIM3-212ENST00000533064 RND2P52198 227 aa11.08□□□□□ -0.64
TRIM3-212ENST00000533064 UQCC3Q6UW78 93 aa11.08□□□□□ -0.64
TRIM3-212ENST00000533064 C10orf99Q6UWK7 81 aa11.08□□□□□ -0.64
TRIM3-212ENST00000533064 C21orf62Q9NYP8 219 aa11.08□□□□□ -0.64
TRIM3-212ENST00000533064 TRBV7-1A0A0A6YYK4 115 aa11.07□□□□□ -0.64
TRIM3-212ENST00000533064 TSPAN15O95858 294 aa11.07□□□□□ -0.64
TRIM3-212ENST00000533064 FOXL1Q12952 345 aa11.07□□□□□ -0.64
TRIM3-212ENST00000533064 Q56UQ5 140 aa11.07□□□□□ -0.64
TRIM3-212ENST00000533064 TMEM41BQ5BJD5 291 aa11.07□□□□□ -0.64
TRIM3-212ENST00000533064 TEPPQ6URK8 271 aa11.07□□□□□ -0.64
TRIM3-212ENST00000533064 TMEM144Q7Z5S9 345 aa11.07□□□□□ -0.64
TRIM3-212ENST00000533064 TMEM116Q8NCL8 245 aa11.07□□□□□ -0.64
TRIM3-212ENST00000533064 OR4X1Q8NH49 305 aa11.07□□□□□ -0.64
TRIM3-212ENST00000533064 TXN2Q99757 166 aa11.07□□□□□ -0.64
TRIM3-212ENST00000533064 KLK15Q9H2R5 256 aa11.07□□□□□ -0.64
TRIM3-212ENST00000533064 RPRMQ9NS64 109 aa11.07□□□□□ -0.64
TRIM3-212ENST00000533064 GAR1Q9NY12 217 aaKnown RBP11.07□□□□□ -0.64
TRIM3-212ENST00000533064 LSM4Q9Y4Z0 139 aaKnown RBP11.07□□□□□ -0.64
TRIM3-212ENST00000533064 S4R3C0 116 aa11.07□□□□□ -0.64
TRIM3-212ENST00000533064 WNK1Q9H4A3 2382 aa11.07□□□□□ -0.64
TRIM3-212ENST00000533064 ATRQ13535 2644 aa11.06□□□□□ -0.64
TRIM3-212ENST00000533064 GNG7O60262 68 aa11.06□□□□□ -0.64
TRIM3-212ENST00000533064 MBP02144 154 aa11.06□□□□□ -0.64
TRIM3-212ENST00000533064 H2AFB1P0C5Y9 115 aa11.06□□□□□ -0.64
TRIM3-212ENST00000533064 RAB31Q13636 194 aa11.06□□□□□ -0.64
TRIM3-212ENST00000533064 TOR2AQ5JU69 321 aa11.06□□□□□ -0.64
TRIM3-212ENST00000533064 LCNL1Q6ZST4 164 aa11.06□□□□□ -0.64
TRIM3-212ENST00000533064 NPIPB3Q92617 1050 aa11.06□□□□□ -0.64
TRIM3-212ENST00000533064 KCNIP2Q9NS61 270 aa11.06□□□□□ -0.64
TRIM3-212ENST00000533064 ZFP92A6NM28 416 aa11.05□□□□□ -0.64
TRIM3-212ENST00000533064 IGHV3-23P01764 117 aa11.05□□□□□ -0.64
TRIM3-212ENST00000533064 RPLP1P05386 114 aaKnown RBP11.05□□□□□ -0.64
TRIM3-212ENST00000533064 ELLP55199 621 aaPredicted RBP11.05□□□□□ -0.64
TRIM3-212ENST00000533064 FAM209BQ5JX69 171 aa11.05□□□□□ -0.64
TRIM3-212ENST00000533064 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.05□□□□□ -0.64
TRIM3-212ENST00000533064 RNF152Q8N8N0 203 aa11.05□□□□□ -0.64
TRIM3-212ENST00000533064 ZNF502Q8TBZ5 544 aa11.05□□□□□ -0.64
TRIM3-212ENST00000533064 MGST2Q99735 147 aa11.05□□□□□ -0.64
TRIM3-212ENST00000533064 TRAV30A0A087WSZ9 112 aa11.04□□□□□ -0.64
TRIM3-212ENST00000533064 CLN5O75503 358 aa11.04□□□□□ -0.64
TRIM3-212ENST00000533064 HBE1P02100 147 aa11.04□□□□□ -0.64
TRIM3-212ENST00000533064 FCGR2BP31994 310 aaPredicted RBP11.04□□□□□ -0.64
TRIM3-212ENST00000533064 KHDC1LQ5JSQ8 128 aa11.04□□□□□ -0.64
TRIM3-212ENST00000533064 FFAR4Q5NUL3 377 aa11.04□□□□□ -0.64
TRIM3-212ENST00000533064 ATP6V0BQ99437 205 aa11.04□□□□□ -0.64
TRIM3-212ENST00000533064 GGTLC1Q9BX51 225 aa11.04□□□□□ -0.64
TRIM3-212ENST00000533064 VSIRQ9H7M9 311 aa11.04□□□□□ -0.64
TRIM3-212ENST00000533064 TRAV1-1A0A0B4J248 108 aa11.04□□□□□ -0.64
TRIM3-212ENST00000533064 OR2T8A6NH00 312 aa11.04□□□□□ -0.64
TRIM3-212ENST00000533064 KRBOX1C9JBD0 128 aa11.04□□□□□ -0.64
TRIM3-212ENST00000533064 IGHV3-11P01762 117 aa11.04□□□□□ -0.64
TRIM3-212ENST00000533064 OR10J1P30954 320 aa11.04□□□□□ -0.64
TRIM3-212ENST00000533064 PROK1P58294 105 aa11.04□□□□□ -0.64
TRIM3-212ENST00000533064 RAB2AP61019 212 aa11.04□□□□□ -0.64
TRIM3-212ENST00000533064 ZNF491Q8N8L2 437 aa11.04□□□□□ -0.64
TRIM3-212ENST00000533064 UBE2E2Q96LR5 201 aa11.04□□□□□ -0.64
TRIM3-212ENST00000533064 MRPL36Q9P0J6 103 aaKnown RBP11.04□□□□□ -0.64
TRIM3-212ENST00000533064 AGPAT2O15120 278 aa11.03□□□□□ -0.64
TRIM3-212ENST00000533064 NUPL2O15504 423 aaKnown RBP11.03□□□□□ -0.64
TRIM3-212ENST00000533064 FABP1P07148 127 aa11.03□□□□□ -0.64
TRIM3-212ENST00000533064 M6PRP20645 277 aa11.03□□□□□ -0.64
TRIM3-212ENST00000533064 ZP3P21754 424 aa11.03□□□□□ -0.64
TRIM3-212ENST00000533064 ACOT6Q3I5F7 207 aaPredicted RBP11.03□□□□□ -0.64
TRIM3-212ENST00000533064 SPSB3Q6PJ21 355 aa11.03□□□□□ -0.64
TRIM3-212ENST00000533064 CLEC19AQ6UXS0 136 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms