RNA–Protein interactions for RNA: ENST00000532820.5

CAPRIN1-212, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 3,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-212ENST00000532820 CEACAM3P40198 252 aa10.67□□□□□ -0.7
CAPRIN1-212ENST00000532820 GALR1P47211 349 aa10.67□□□□□ -0.7
CAPRIN1-212ENST00000532820 C10orf113Q5VZT2 155 aa10.67□□□□□ -0.7
CAPRIN1-212ENST00000532820 NBR2O15453 112 aa10.66□□□□□ -0.7
CAPRIN1-212ENST00000532820 IGHV4-39P01824 125 aa10.66□□□□□ -0.7
CAPRIN1-212ENST00000532820 FXYD3Q14802 87 aa10.66□□□□□ -0.7
CAPRIN1-212ENST00000532820 TMEM249Q2WGJ8 235 aa10.66□□□□□ -0.7
CAPRIN1-212ENST00000532820 OCC1Q8TAD7 63 aa10.66□□□□□ -0.7
CAPRIN1-212ENST00000532820 NRGNQ92686 78 aa10.66□□□□□ -0.7
CAPRIN1-212ENST00000532820 SLC25A2Q9BXI2 301 aa10.66□□□□□ -0.7
CAPRIN1-212ENST00000532820 ODF3BA8MYP8 253 aa10.66□□□□□ -0.7
CAPRIN1-212ENST00000532820 TOX4O94842 621 aa10.66□□□□□ -0.7
CAPRIN1-212ENST00000532820 C8orf88P0DMB2 117 aa10.66□□□□□ -0.7
CAPRIN1-212ENST00000532820 UBE2L3P68036 154 aaKnown RBP10.66□□□□□ -0.7
CAPRIN1-212ENST00000532820 LINC00305Q7Z4B0 112 aa10.66□□□□□ -0.7
CAPRIN1-212ENST00000532820 F11RQ9Y624 299 aaKnown RBP10.66□□□□□ -0.7
CAPRIN1-212ENST00000532820 USP9YO00507 2555 aaPredicted RBP10.66□□□□□ -0.7
CAPRIN1-212ENST00000532820 GGTLC3B5MD39 225 aa10.65□□□□□ -0.7
CAPRIN1-212ENST00000532820 NDUFA6P56556 154 aa10.65□□□□□ -0.7
CAPRIN1-212ENST00000532820 LINC00479Q96M42 142 aa10.65□□□□□ -0.7
CAPRIN1-212ENST00000532820 PSMB11A5LHX3 300 aa10.65□□□□□ -0.7
CAPRIN1-212ENST00000532820 F6UZH7 168 aa10.65□□□□□ -0.7
CAPRIN1-212ENST00000532820 MAS1LP35410 378 aa10.65□□□□□ -0.7
CAPRIN1-212ENST00000532820 OR5I1Q13606 314 aa10.65□□□□□ -0.7
CAPRIN1-212ENST00000532820 OR1P1Q8NH06 330 aa10.65□□□□□ -0.7
CAPRIN1-212ENST00000532820 BLNKQ8WV28 456 aa10.65□□□□□ -0.7
CAPRIN1-212ENST00000532820 FAM167A-AS1Q96KT0 104 aa10.65□□□□□ -0.7
CAPRIN1-212ENST00000532820 C5orf52A6NGY3 159 aa10.65□□□□□ -0.71
CAPRIN1-212ENST00000532820 PDZD11Q5EBL8 140 aa10.65□□□□□ -0.71
CAPRIN1-212ENST00000532820 FAM120AOSQ5T036 256 aa10.65□□□□□ -0.71
CAPRIN1-212ENST00000532820 OR5B12Q96R08 314 aa10.65□□□□□ -0.71
CAPRIN1-212ENST00000532820 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.65□□□□□ -0.717e-7■■■■■ 31
CAPRIN1-212ENST00000532820 FABP1P07148 127 aa10.64□□□□□ -0.71
CAPRIN1-212ENST00000532820 TAS2R45P59539 299 aa10.64□□□□□ -0.71
CAPRIN1-212ENST00000532820 LMO4P61968 165 aa10.64□□□□□ -0.71
CAPRIN1-212ENST00000532820 KIR3DL3Q8N743 410 aa10.64□□□□□ -0.71
CAPRIN1-212ENST00000532820 MALSU1Q96EH3 234 aa10.64□□□□□ -0.71
CAPRIN1-212ENST00000532820 TMEM242Q9NWH2 141 aa10.64□□□□□ -0.71
CAPRIN1-212ENST00000532820 SH2D7A6NKC9 451 aaPredicted RBP10.64□□□□□ -0.71
CAPRIN1-212ENST00000532820 PQLC2Q6ZP29 291 aa10.64□□□□□ -0.71
CAPRIN1-212ENST00000532820 NHLRC2Q8NBF2 726 aa10.64□□□□□ -0.71
CAPRIN1-212ENST00000532820 SGK494Q96LW2 274 aa10.64□□□□□ -0.71
CAPRIN1-212ENST00000532820 CTDSP1Q9GZU7 261 aa10.64□□□□□ -0.71
CAPRIN1-212ENST00000532820 ABCA2Q9BZC7 2435 aa10.64□□□□□ -0.71
CAPRIN1-212ENST00000532820 PFN1P07737 140 aaKnown RBP10.64□□□□□ -0.71
CAPRIN1-212ENST00000532820 MRPL41Q8IXM3 137 aaKnown RBP10.64□□□□□ -0.71
CAPRIN1-212ENST00000532820 TMEM167BQ9NRX6 74 aa10.64□□□□□ -0.71
CAPRIN1-212ENST00000532820 SLC17A3O00476 420 aa10.63□□□□□ -0.71
CAPRIN1-212ENST00000532820 IGHV3-23P01764 117 aa10.63□□□□□ -0.71
CAPRIN1-212ENST00000532820 NDPQ00604 133 aa10.63□□□□□ -0.71
CAPRIN1-212ENST00000532820 C22orf15Q8WYQ4 148 aa10.63□□□□□ -0.71
CAPRIN1-212ENST00000532820 FRZBQ92765 325 aa10.63□□□□□ -0.71
CAPRIN1-212ENST00000532820 SIRPDQ9H106 197 aa10.63□□□□□ -0.71
CAPRIN1-212ENST00000532820 GSN-AS1Q9NRJ2 163 aa10.63□□□□□ -0.71
CAPRIN1-212ENST00000532820 K7EN84 100 aa10.63□□□□□ -0.71
CAPRIN1-212ENST00000532820 MEOX2P50222 304 aa10.63□□□□□ -0.71
CAPRIN1-212ENST00000532820 LYZP61626 148 aa10.63□□□□□ -0.71
CAPRIN1-212ENST00000532820 RANP62826 216 aaKnown RBP10.63□□□□□ -0.71
CAPRIN1-212ENST00000532820 ETFRF1Q6IPR1 90 aa10.63□□□□□ -0.71
CAPRIN1-212ENST00000532820 THAP8Q8NA92 274 aa10.63□□□□□ -0.71
CAPRIN1-212ENST00000532820 BBC3Q96PG8 261 aaPredicted RBP10.63□□□□□ -0.71
CAPRIN1-212ENST00000532820 TBX15Q96SF7 602 aa10.63□□□□□ -0.71
CAPRIN1-212ENST00000532820 PAXXQ9BUH6 204 aa10.63□□□□□ -0.71
CAPRIN1-212ENST00000532820 ABCA12Q86UK0 2595 aa10.62□□□□□ -0.71
CAPRIN1-212ENST00000532820 IGHV2-70DA0A0C4DH43 119 aa10.62□□□□□ -0.71
CAPRIN1-212ENST00000532820 HIST1H2BKO60814 126 aa10.62□□□□□ -0.71
CAPRIN1-212ENST00000532820 HIST1H2BJP06899 126 aa10.62□□□□□ -0.71
CAPRIN1-212ENST00000532820 HIST1H2BOP23527 126 aa10.62□□□□□ -0.71
CAPRIN1-212ENST00000532820 S100PP25815 95 aa10.62□□□□□ -0.71
CAPRIN1-212ENST00000532820 HIST1H2BBP33778 126 aa10.62□□□□□ -0.71
CAPRIN1-212ENST00000532820 HIST1H2BDP58876 126 aa10.62□□□□□ -0.71
CAPRIN1-212ENST00000532820 HIST1H2BCP62807 126 aa10.62□□□□□ -0.71
CAPRIN1-212ENST00000532820 CX3CL1P78423 397 aa10.62□□□□□ -0.71
CAPRIN1-212ENST00000532820 HIST2H2BEQ16778 126 aa10.62□□□□□ -0.71
CAPRIN1-212ENST00000532820 C5orf64Q2M2E5 130 aa10.62□□□□□ -0.71
CAPRIN1-212ENST00000532820 TIGITQ495A1 244 aa10.62□□□□□ -0.71
CAPRIN1-212ENST00000532820 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.62□□□□□ -0.71
CAPRIN1-212ENST00000532820 HIST1H2BHQ93079 126 aa10.62□□□□□ -0.71
CAPRIN1-212ENST00000532820 CCL19Q99731 98 aa10.62□□□□□ -0.71
CAPRIN1-212ENST00000532820 HIST1H2BNQ99877 126 aa10.62□□□□□ -0.71
CAPRIN1-212ENST00000532820 HIST1H2BMQ99879 126 aa10.62□□□□□ -0.71
CAPRIN1-212ENST00000532820 RPH3ALQ9UNE2 315 aa10.62□□□□□ -0.71
CAPRIN1-212ENST00000532820 CRYGCP07315 174 aa10.62□□□□□ -0.71
CAPRIN1-212ENST00000532820 PAX2Q02962 417 aa10.62□□□□□ -0.71
CAPRIN1-212ENST00000532820 GFI1BQ5VTD9 330 aa10.62□□□□□ -0.71
CAPRIN1-212ENST00000532820 C1QL4Q86Z23 238 aa10.62□□□□□ -0.71
CAPRIN1-212ENST00000532820 OR2T10Q8NGZ9 312 aa10.62□□□□□ -0.71
CAPRIN1-212ENST00000532820 SFRP2Q96HF1 295 aa10.62□□□□□ -0.71
CAPRIN1-212ENST00000532820 ZANQ9Y493 2812 aa10.62□□□□□ -0.71
CAPRIN1-212ENST00000532820 HELTA6NFD8 242 aa10.62□□□□□ -0.71
CAPRIN1-212ENST00000532820 TRGC1P0CF51 173 aa10.62□□□□□ -0.71
CAPRIN1-212ENST00000532820 PSG1P11464 419 aa10.62□□□□□ -0.71
CAPRIN1-212ENST00000532820 TMEM11P17152 192 aa10.62□□□□□ -0.71
CAPRIN1-212ENST00000532820 SAA4P35542 130 aa10.62□□□□□ -0.71
CAPRIN1-212ENST00000532820 BPIFB3P59826 476 aa10.62□□□□□ -0.71
CAPRIN1-212ENST00000532820 TMEM116Q8NCL8 245 aa10.62□□□□□ -0.71
CAPRIN1-212ENST00000532820 TRAV34A0A0B4J273 112 aa10.61□□□□□ -0.71
CAPRIN1-212ENST00000532820 OVOL3O00110 214 aa10.61□□□□□ -0.71
CAPRIN1-212ENST00000532820 AP4M1O00189 453 aa10.61□□□□□ -0.71
CAPRIN1-212ENST00000532820 CENPWQ5EE01 88 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms