RNA–Protein interactions for RNA: ENST00000532289.1

PTP4A2-214, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-214ENST00000532289 VCX3BQ9H321 246 aa13.53□□□□□ -0.24
PTP4A2-214ENST00000532289 PLA2G2DQ9UNK4 145 aa13.53□□□□□ -0.24
PTP4A2-214ENST00000532289 RNF213Q63HN8 5207 aa13.52□□□□□ -0.24
PTP4A2-214ENST00000532289 CLN5O75503 358 aa13.52□□□□□ -0.25
PTP4A2-214ENST00000532289 HSPA13P48723 471 aa13.52□□□□□ -0.25
PTP4A2-214ENST00000532289 PPP5CP53041 499 aa13.52□□□□□ -0.25
PTP4A2-214ENST00000532289 DLK1P80370 383 aa13.52□□□□□ -0.25
PTP4A2-214ENST00000532289 GSG1LQ6UXU4 331 aa13.52□□□□□ -0.25
PTP4A2-214ENST00000532289 TBC1D26Q86UD7 250 aa13.52□□□□□ -0.25
PTP4A2-214ENST00000532289 SLC35G3Q8N808 338 aa13.52□□□□□ -0.25
PTP4A2-214ENST00000532289 MRGPRFQ96AM1 343 aa13.52□□□□□ -0.25
PTP4A2-214ENST00000532289 FXYD6Q9H0Q3 95 aa13.52□□□□□ -0.25
PTP4A2-214ENST00000532289 LRP1Q07954 4544 aaKnown RBP13.51□□□□□ -0.25
PTP4A2-214ENST00000532289 TMEM127O75204 238 aa13.51□□□□□ -0.25
PTP4A2-214ENST00000532289 KRTAP10-1P60331 282 aa13.51□□□□□ -0.25
PTP4A2-214ENST00000532289 GABARAPL2P60520 117 aa13.51□□□□□ -0.25
PTP4A2-214ENST00000532289 TSPAN5P62079 268 aa13.51□□□□□ -0.25
PTP4A2-214ENST00000532289 SNRPD3P62318 126 aaKnown RBP13.51□□□□□ -0.25
PTP4A2-214ENST00000532289 SPINK9Q5DT21 86 aa13.51□□□□□ -0.25
PTP4A2-214ENST00000532289 TTC32Q5I0X7 151 aa13.51□□□□□ -0.25
PTP4A2-214ENST00000532289 CDPF1Q6NVV7 123 aa13.51□□□□□ -0.25
PTP4A2-214ENST00000532289 OR4X1Q8NH49 305 aa13.51□□□□□ -0.25
PTP4A2-214ENST00000532289 Q9H8V8 135 aa13.51□□□□□ -0.25
PTP4A2-214ENST00000532289 ANAPC10Q9UM13 185 aa13.51□□□□□ -0.25
PTP4A2-214ENST00000532289 TRAV30A0A087WSZ9 112 aa13.5□□□□□ -0.25
PTP4A2-214ENST00000532289 INS-IGF2F8WCM5 200 aa13.5□□□□□ -0.25
PTP4A2-214ENST00000532289 IGKV1-39P01597 117 aa13.5□□□□□ -0.25
PTP4A2-214ENST00000532289 IGKV1D-39P04432 117 aa13.5□□□□□ -0.25
PTP4A2-214ENST00000532289 NAT1P18440 290 aa13.5□□□□□ -0.25
PTP4A2-214ENST00000532289 ICAM4Q14773 271 aa13.5□□□□□ -0.25
PTP4A2-214ENST00000532289 SPARTQ8N0X7 666 aa13.5□□□□□ -0.25
PTP4A2-214ENST00000532289 PDCD10Q9BUL8 212 aa13.5□□□□□ -0.25
PTP4A2-214ENST00000532289 Q9H3A6 140 aa13.5□□□□□ -0.25
PTP4A2-214ENST00000532289 ENY2Q9NPA8 101 aa13.5□□□□□ -0.25
PTP4A2-214ENST00000532289 OPRK1P41145 380 aa13.49□□□□□ -0.25
PTP4A2-214ENST00000532289 DAD1P61803 113 aa13.49□□□□□ -0.25
PTP4A2-214ENST00000532289 SEPSECSQ9HD40 501 aaKnown RBP13.49□□□□□ -0.25
PTP4A2-214ENST00000532289 IGHV3OR16-12A0A075B7B8 117 aa13.48□□□□□ -0.25
PTP4A2-214ENST00000532289 LOC100506127A0A0U1RQW1 187 aa13.48□□□□□ -0.25
PTP4A2-214ENST00000532289 RPS10-NUDT3A0A1W2PQS6 291 aa13.48□□□□□ -0.25
PTP4A2-214ENST00000532289 H3BMM0 161 aa13.48□□□□□ -0.25
PTP4A2-214ENST00000532289 NUDT3O95989 172 aa13.48□□□□□ -0.25
PTP4A2-214ENST00000532289 HLA-DMAP28067 261 aa13.48□□□□□ -0.25
PTP4A2-214ENST00000532289 HRH1P35367 487 aa13.48□□□□□ -0.25
PTP4A2-214ENST00000532289 RPL5P46777 297 aaKnown RBP13.48□□□□□ -0.25
PTP4A2-214ENST00000532289 TMEM69Q5SWH9 247 aa13.48□□□□□ -0.25
PTP4A2-214ENST00000532289 C16orf54Q6UWD8 224 aa13.48□□□□□ -0.25
PTP4A2-214ENST00000532289 Q8WTZ3 238 aa13.48□□□□□ -0.25
PTP4A2-214ENST00000532289 YTHDF2Q9Y5A9 579 aaKnown RBP13.48□□□□□ -0.25
PTP4A2-214ENST00000532289 U3KQE9 123 aa13.48□□□□□ -0.25
PTP4A2-214ENST00000532289 ATG12O94817 140 aa13.47□□□□□ -0.25
PTP4A2-214ENST00000532289 HNRNPCP07910 306 aaKnown RBP eCLIP13.47□□□□□ -0.25
PTP4A2-214ENST00000532289 RNASE2P10153 161 aaKnown RBP13.47□□□□□ -0.25
PTP4A2-214ENST00000532289 PRSS3P35030 304 aa13.47□□□□□ -0.25
PTP4A2-214ENST00000532289 HOXA1P49639 335 aaPredicted RBP13.47□□□□□ -0.25
PTP4A2-214ENST00000532289 TAS2R20P59543 309 aa13.47□□□□□ -0.25
PTP4A2-214ENST00000532289 MLANAQ16655 118 aa13.47□□□□□ -0.25
PTP4A2-214ENST00000532289 TIGITQ495A1 244 aa13.47□□□□□ -0.25
PTP4A2-214ENST00000532289 IZUMO2Q6UXV1 221 aa13.47□□□□□ -0.25
PTP4A2-214ENST00000532289 LYSMD2Q8IV50 215 aa13.47□□□□□ -0.25
PTP4A2-214ENST00000532289 IGKV1-17P01599 117 aa13.46□□□□□ -0.25
PTP4A2-214ENST00000532289 ETV6P41212 452 aa13.46□□□□□ -0.25
PTP4A2-214ENST00000532289 ALDH3B2P48448 385 aa13.46□□□□□ -0.25
PTP4A2-214ENST00000532289 UCP3P55916 312 aa13.46□□□□□ -0.25
PTP4A2-214ENST00000532289 USF2Q15853 346 aaPredicted RBP13.46□□□□□ -0.25
PTP4A2-214ENST00000532289 IZUMO4Q1ZYL8 232 aa13.46□□□□□ -0.25
PTP4A2-214ENST00000532289 SSX7Q7RTT5 188 aa13.46□□□□□ -0.25
PTP4A2-214ENST00000532289 CROCCP3Q8IVE0 287 aa13.46□□□□□ -0.25
PTP4A2-214ENST00000532289 GLMPQ8WWB7 406 aa13.46□□□□□ -0.25
PTP4A2-214ENST00000532289 FNDC4Q9H6D8 234 aaPredicted RBP13.46□□□□□ -0.25
PTP4A2-214ENST00000532289 MRPL36Q9P0J6 103 aaKnown RBP13.46□□□□□ -0.25
PTP4A2-214ENST00000532289 A0A0B4J293 547 aa13.45□□□□□ -0.26
PTP4A2-214ENST00000532289 A0A1W2PPQ1 181 aa13.45□□□□□ -0.26
PTP4A2-214ENST00000532289 FAM90A26D6RGX4 464 aa13.45□□□□□ -0.26
PTP4A2-214ENST00000532289 UBE2NLQ5JXB2 153 aa13.45□□□□□ -0.26
PTP4A2-214ENST00000532289 OR1S2Q8NGQ3 325 aa13.45□□□□□ -0.26
PTP4A2-214ENST00000532289 AKR1C2P52895 323 aa13.44□□□□□ -0.26
PTP4A2-214ENST00000532289 Q6ZRN7 208 aaPredicted RBP13.44□□□□□ -0.26
PTP4A2-214ENST00000532289 NRN1Q9NPD7 142 aa13.44□□□□□ -0.26
PTP4A2-214ENST00000532289 RAB26Q9ULW5 256 aa13.44□□□□□ -0.26
PTP4A2-214ENST00000532289 LOC102723971A0A1B0GUV8 181 aa13.43□□□□□ -0.26
PTP4A2-214ENST00000532289 ANKRD65E5RJM6 399 aa13.43□□□□□ -0.26
PTP4A2-214ENST00000532289 IFNA5P01569 189 aa13.43□□□□□ -0.26
PTP4A2-214ENST00000532289 HLA-DRB4P13762 266 aa13.43□□□□□ -0.26
PTP4A2-214ENST00000532289 NKX2-1P43699 371 aaPredicted RBP13.43□□□□□ -0.26
PTP4A2-214ENST00000532289 HLA-DRB4X5D2U9 266 aa13.43□□□□□ -0.26
PTP4A2-214ENST00000532289 FAT3Q8TDW7 4589 aa13.43□□□□□ -0.26
PTP4A2-214ENST00000532289 GSTZ1O43708 216 aaPredicted RBP13.42□□□□□ -0.26
PTP4A2-214ENST00000532289 IGKV1-5P01602 117 aa13.42□□□□□ -0.26
PTP4A2-214ENST00000532289 PGAM2P15259 253 aa13.42□□□□□ -0.26
PTP4A2-214ENST00000532289 YPEL3P61236 119 aaPredicted RBP13.42□□□□□ -0.26
PTP4A2-214ENST00000532289 DHODHQ02127 395 aa13.42□□□□□ -0.26
PTP4A2-214ENST00000532289 SIGLEC15Q6ZMC9 328 aa13.42□□□□□ -0.26
PTP4A2-214ENST00000532289 SAMD12Q8N8I0 201 aa13.42□□□□□ -0.26
PTP4A2-214ENST00000532289 EREGO14944 169 aa13.41□□□□□ -0.26
PTP4A2-214ENST00000532289 SLC25A4P12235 298 aa13.41□□□□□ -0.26
PTP4A2-214ENST00000532289 OR10J1P30954 320 aa13.41□□□□□ -0.26
PTP4A2-214ENST00000532289 FXYD7P58549 80 aa13.41□□□□□ -0.26
PTP4A2-214ENST00000532289 RRNAD1Q96FB5 475 aaKnown RBP13.41□□□□□ -0.26
PTP4A2-214ENST00000532289 IGKV3-20P01619 116 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms