RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 C8orf88P0DMB2 117 aa12.86□□□□□ -0.35
PKP3-208ENST00000531857 IGKV1-13P0DP09 117 aa12.86□□□□□ -0.35
PKP3-208ENST00000531857 TPT1P13693 172 aaKnown RBP12.86□□□□□ -0.35
PKP3-208ENST00000531857 P2RY1P47900 373 aa12.86□□□□□ -0.35
PKP3-208ENST00000531857 RAB32Q13637 225 aa12.86□□□□□ -0.35
PKP3-208ENST00000531857 KLK9Q2XQG4 91 aa12.86□□□□□ -0.35
PKP3-208ENST00000531857 ZNF585BQ52M93 769 aa12.86□□□□□ -0.35
PKP3-208ENST00000531857 Q6ZWC4 215 aa12.86□□□□□ -0.35
PKP3-208ENST00000531857 TP53RKQ96S44 253 aa12.86□□□□□ -0.35
PKP3-208ENST00000531857 HSD17B10Q99714 261 aaKnown RBP12.86□□□□□ -0.35
PKP3-208ENST00000531857 KLK9Q9UKQ9 250 aa12.86□□□□□ -0.35
PKP3-208ENST00000531857 IGHV3-35A0A0C4DH35 117 aa12.85□□□□□ -0.35
PKP3-208ENST00000531857 CGB1A6NKQ9 187 aa12.85□□□□□ -0.35
PKP3-208ENST00000531857 K7EPK0 472 aa12.85□□□□□ -0.35
PKP3-208ENST00000531857 CTRB1P17538 263 aa12.85□□□□□ -0.35
PKP3-208ENST00000531857 BMI1P35226 326 aa12.85□□□□□ -0.35
PKP3-208ENST00000531857 S100A10P60903 97 aa12.85□□□□□ -0.35
PKP3-208ENST00000531857 EIF4EBP1Q13541 118 aaPredicted RBP12.85□□□□□ -0.35
PKP3-208ENST00000531857 SP6Q3SY56 376 aa12.85□□□□□ -0.35
PKP3-208ENST00000531857 CTRB2Q6GPI1 263 aa12.85□□□□□ -0.35
PKP3-208ENST00000531857 OR4A47Q6IF82 309 aa12.85□□□□□ -0.35
PKP3-208ENST00000531857 LYZL2Q7Z4W2 148 aa12.85□□□□□ -0.35
PKP3-208ENST00000531857 SLC35G3Q8N808 338 aa12.85□□□□□ -0.35
PKP3-208ENST00000531857 OR1L6Q8NGR2 347 aa12.85□□□□□ -0.35
PKP3-208ENST00000531857 ST8SIA2Q92186 375 aa12.85□□□□□ -0.35
PKP3-208ENST00000531857 GPHA2Q96T91 129 aa12.85□□□□□ -0.35
PKP3-208ENST00000531857 TP53TG1Q9Y2A0 90 aa12.85□□□□□ -0.35
PKP3-208ENST00000531857 IGLV11-55A0A075B6I3 123 aa12.84□□□□□ -0.35
PKP3-208ENST00000531857 TRAV25A0A0B4J276 109 aa12.84□□□□□ -0.35
PKP3-208ENST00000531857 FAM90A26D6RGX4 464 aa12.84□□□□□ -0.35
PKP3-208ENST00000531857 MAS1LP35410 378 aa12.84□□□□□ -0.35
PKP3-208ENST00000531857 NKX2-1P43699 371 aaPredicted RBP12.84□□□□□ -0.35
PKP3-208ENST00000531857 RBPMS2Q6ZRY4 209 aaKnown RBP12.84□□□□□ -0.35
PKP3-208ENST00000531857 SSX9Q7RTT3 188 aa12.84□□□□□ -0.35
PKP3-208ENST00000531857 OR2C3Q8N628 320 aa12.84□□□□□ -0.35
PKP3-208ENST00000531857 OR4D5Q8NGN0 318 aa12.84□□□□□ -0.35
PKP3-208ENST00000531857 OR4S2Q8NH73 311 aa12.84□□□□□ -0.35
PKP3-208ENST00000531857 OR1S1Q8NH92 325 aa12.84□□□□□ -0.35
PKP3-208ENST00000531857 VSTM2AQ8TAG5 236 aa12.84□□□□□ -0.35
PKP3-208ENST00000531857 TCTEX1D2Q8WW35 142 aa12.84□□□□□ -0.35
PKP3-208ENST00000531857 RRNAD1Q96FB5 475 aaKnown RBP12.84□□□□□ -0.35
PKP3-208ENST00000531857 SLC25A31Q9H0C2 315 aa12.84□□□□□ -0.35
PKP3-208ENST00000531857 KLK5Q9Y337 293 aaPredicted RBP12.84□□□□□ -0.35
PKP3-208ENST00000531857 HERC2O95714 4834 aa12.83□□□□□ -0.35
PKP3-208ENST00000531857 TRBV7-1A0A0A6YYK4 115 aa12.83□□□□□ -0.36
PKP3-208ENST00000531857 HIST1H1BP16401 226 aaKnown RBP12.83□□□□□ -0.36
PKP3-208ENST00000531857 RPL12P30050 165 aaKnown RBP12.83□□□□□ -0.36
PKP3-208ENST00000531857 APOC4P55056 127 aa12.83□□□□□ -0.36
PKP3-208ENST00000531857 NMSQ5H8A3 153 aa12.83□□□□□ -0.36
PKP3-208ENST00000531857 MARC2Q969Z3 335 aa12.83□□□□□ -0.36
PKP3-208ENST00000531857 ZNF471Q9BX82 626 aaPredicted RBP12.83□□□□□ -0.36
PKP3-208ENST00000531857 MRPL27Q9P0M9 148 aaKnown RBP12.83□□□□□ -0.36
PKP3-208ENST00000531857 H0YIZ8 118 aa12.82□□□□□ -0.36
PKP3-208ENST00000531857 DEFA4P12838 97 aa12.82□□□□□ -0.36
PKP3-208ENST00000531857 GPR183P32249 361 aa12.82□□□□□ -0.36
PKP3-208ENST00000531857 RPL8P62917 257 aaKnown RBP12.82□□□□□ -0.36
PKP3-208ENST00000531857 ID3Q02535 119 aa12.82□□□□□ -0.36
PKP3-208ENST00000531857 BAP18Q8IXM2 172 aa12.82□□□□□ -0.36
PKP3-208ENST00000531857 ZNF502Q8TBZ5 544 aa12.82□□□□□ -0.36
PKP3-208ENST00000531857 RNF183Q96D59 192 aa12.82□□□□□ -0.36
PKP3-208ENST00000531857 BORCS7-ASMTA0A0B4J1R7 106 aa12.81□□□□□ -0.36
PKP3-208ENST00000531857 MPTX1A8MV57 137 aa12.81□□□□□ -0.36
PKP3-208ENST00000531857 WRBO00258 174 aa12.81□□□□□ -0.36
PKP3-208ENST00000531857 RBFOX2O43251 390 aaKnown RBP eCLIP12.81□□□□□ -0.36
PKP3-208ENST00000531857 MED6O75586 246 aa12.81□□□□□ -0.36
PKP3-208ENST00000531857 S1PR2O95136 353 aa12.81□□□□□ -0.36
PKP3-208ENST00000531857 MBPP02686 304 aaPredicted RBP12.81□□□□□ -0.36
PKP3-208ENST00000531857 ATF4P18848 351 aaPredicted RBP12.81□□□□□ -0.36
PKP3-208ENST00000531857 VAMP2P63027 116 aa12.81□□□□□ -0.36
PKP3-208ENST00000531857 BAXQ07812 192 aa12.81□□□□□ -0.36
PKP3-208ENST00000531857 RNASE11Q8TAA1 199 aaKnown RBP12.81□□□□□ -0.36
PKP3-208ENST00000531857 CXorf58Q96LI9 332 aa12.81□□□□□ -0.36
PKP3-208ENST00000531857 RAB40CQ96S21 281 aa12.81□□□□□ -0.36
PKP3-208ENST00000531857 SPAG8Q99932 426 aaPredicted RBP12.81□□□□□ -0.36
PKP3-208ENST00000531857 PRR13Q9NZ81 148 aa12.81□□□□□ -0.36
PKP3-208ENST00000531857 UBE2CO00762 179 aa12.8□□□□□ -0.36
PKP3-208ENST00000531857 RPL35AP18077 110 aaKnown RBP12.8□□□□□ -0.36
PKP3-208ENST00000531857 ELLP55199 621 aaPredicted RBP12.8□□□□□ -0.36
PKP3-208ENST00000531857 TAS2R30P59541 319 aa12.8□□□□□ -0.36
PKP3-208ENST00000531857 ODF3L2Q3SX64 289 aa12.8□□□□□ -0.36
PKP3-208ENST00000531857 SLC7A5P1Q8MH63 180 aa12.8□□□□□ -0.36
PKP3-208ENST00000531857 OR51H1Q8NH63 302 aa12.8□□□□□ -0.36
PKP3-208ENST00000531857 LHFPL5Q8TAF8 219 aa12.8□□□□□ -0.36
PKP3-208ENST00000531857 PHLDA1Q8WV24 401 aaPredicted RBP12.8□□□□□ -0.36
PKP3-208ENST00000531857 OR5AC2Q9NZP5 309 aa12.8□□□□□ -0.36
PKP3-208ENST00000531857 PFDN2Q9UHV9 154 aa12.8□□□□□ -0.36
PKP3-208ENST00000531857 UFC1Q9Y3C8 167 aa12.8□□□□□ -0.36
PKP3-208ENST00000531857 LSM5Q9Y4Y9 91 aaKnown RBP12.8□□□□□ -0.36
PKP3-208ENST00000531857 DNAH10Q8IVF4 4471 aa12.8□□□□□ -0.36
PKP3-208ENST00000531857 RPS10-NUDT3A0A1W2PQS6 291 aa12.79□□□□□ -0.36
PKP3-208ENST00000531857 IGLC7A0M8Q6 106 aa12.79□□□□□ -0.36
PKP3-208ENST00000531857 PITX3O75364 302 aa12.79□□□□□ -0.36
PKP3-208ENST00000531857 CFDP00746 253 aaPredicted RBP12.79□□□□□ -0.36
PKP3-208ENST00000531857 HRASP01112 189 aa12.79□□□□□ -0.36
PKP3-208ENST00000531857 OR2B8PP59922 312 aa12.79□□□□□ -0.36
PKP3-208ENST00000531857 LGALS9CQ6DKI2 356 aa12.79□□□□□ -0.36
PKP3-208ENST00000531857 STPG3Q8N7X2 389 aa12.79□□□□□ -0.36
PKP3-208ENST00000531857 AIFM2Q9BRQ8 373 aa12.79□□□□□ -0.36
PKP3-208ENST00000531857 PCLOQ9Y6V0 5065 aa12.79□□□□□ -0.36
PKP3-208ENST00000531857 TRAV3A0A0B4J244 114 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 390.2 ms