RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 ZNF688P0C7X2 276 aa6.41□□□□□ -1.38
USF1-210ENST00000531842 PPP5CP53041 499 aa6.41□□□□□ -1.38
USF1-210ENST00000531842 SUB1P53999 127 aaKnown RBP eCLIP6.41□□□□□ -1.38
USF1-210ENST00000531842 EMP1P54849 157 aa6.41□□□□□ -1.38
USF1-210ENST00000531842 PIGPP57054 158 aa6.41□□□□□ -1.38
USF1-210ENST00000531842 ZNF79Q15937 498 aa6.41□□□□□ -1.38
USF1-210ENST00000531842 SP6Q3SY56 376 aa6.41□□□□□ -1.38
USF1-210ENST00000531842 RNASE10Q5GAN6 216 aaKnown RBP6.41□□□□□ -1.38
USF1-210ENST00000531842 STEAP1BQ6NZ63 245 aa6.41□□□□□ -1.38
USF1-210ENST00000531842 ZNF600Q6ZNG1 722 aa6.41□□□□□ -1.38
USF1-210ENST00000531842 UBE2DNLQ8IWF7 75 aa6.41□□□□□ -1.38
USF1-210ENST00000531842 ARRDC1Q8N5I2 433 aa6.41□□□□□ -1.38
USF1-210ENST00000531842 SLC35G3Q8N808 338 aa6.41□□□□□ -1.38
USF1-210ENST00000531842 ZNF114Q8NC26 417 aa6.41□□□□□ -1.38
USF1-210ENST00000531842 CSNK1G2-AS1Q8NCQ2 148 aa6.41□□□□□ -1.38
USF1-210ENST00000531842 OR4C16Q8NGL9 310 aa6.41□□□□□ -1.38
USF1-210ENST00000531842 TERB2Q8NHR7 220 aa6.41□□□□□ -1.38
USF1-210ENST00000531842 LHFPL5Q8TAF8 219 aa6.41□□□□□ -1.38
USF1-210ENST00000531842 MARCH1Q8TCQ1 289 aa6.41□□□□□ -1.38
USF1-210ENST00000531842 TRIM63Q969Q1 353 aa6.41□□□□□ -1.38
USF1-210ENST00000531842 TMEM230Q96A57 120 aa6.41□□□□□ -1.38
USF1-210ENST00000531842 DIRAS2Q96HU8 199 aa6.41□□□□□ -1.38
USF1-210ENST00000531842 NDUFAF3Q9BU61 184 aa6.41□□□□□ -1.38
USF1-210ENST00000531842 PDCD10Q9BUL8 212 aa6.41□□□□□ -1.38
USF1-210ENST00000531842 TMEM231Q9H6L2 316 aa6.41□□□□□ -1.38
USF1-210ENST00000531842 ENY2Q9NPA8 101 aa6.41□□□□□ -1.38
USF1-210ENST00000531842 SCRT2Q9NQ03 307 aa6.41□□□□□ -1.38
USF1-210ENST00000531842 FAM212BQ9NTI7 297 aaPredicted RBP6.41□□□□□ -1.38
USF1-210ENST00000531842 PUS1Q9Y606 427 aaKnown RBP eCLIP6.41□□□□□ -1.38
USF1-210ENST00000531842 ANKRD20A5PA0PJZ0 165 aa6.4□□□□□ -1.38
USF1-210ENST00000531842 GSTZ1O43708 216 aaPredicted RBP6.4□□□□□ -1.38
USF1-210ENST00000531842 SCGB2A1O75556 95 aa6.4□□□□□ -1.38
USF1-210ENST00000531842 ATG12O94817 140 aa6.4□□□□□ -1.38
USF1-210ENST00000531842 RAB3DO95716 219 aa6.4□□□□□ -1.38
USF1-210ENST00000531842 MIFP14174 115 aa6.4□□□□□ -1.38
USF1-210ENST00000531842 TBPP20226 339 aa6.4□□□□□ -1.38
USF1-210ENST00000531842 NPPCP23582 126 aa6.4□□□□□ -1.38
USF1-210ENST00000531842 HOXA1P49639 335 aaPredicted RBP6.4□□□□□ -1.38
USF1-210ENST00000531842 AKR1C2P52895 323 aa6.4□□□□□ -1.38
USF1-210ENST00000531842 TAS2R19P59542 299 aa6.4□□□□□ -1.38
USF1-210ENST00000531842 DEFB1P60022 68 aa6.4□□□□□ -1.38
USF1-210ENST00000531842 SSBP1Q04837 148 aaKnown RBP6.4□□□□□ -1.38
USF1-210ENST00000531842 IL18Q14116 193 aa6.4□□□□□ -1.38
USF1-210ENST00000531842 TRIM16LQ309B1 348 aa6.4□□□□□ -1.38
USF1-210ENST00000531842 ACTL10Q5JWF8 245 aa6.4□□□□□ -1.38
USF1-210ENST00000531842 CCDC190Q86UF4 302 aa6.4□□□□□ -1.38
USF1-210ENST00000531842 STXBP6Q8NFX7 210 aa6.4□□□□□ -1.38
USF1-210ENST00000531842 RNASE11Q8TAA1 199 aaKnown RBP6.4□□□□□ -1.38
USF1-210ENST00000531842 NARS2Q96I59 477 aaKnown RBP6.4□□□□□ -1.38
USF1-210ENST00000531842 METTL26Q96S19 204 aa6.4□□□□□ -1.38
USF1-210ENST00000531842 TBC1D24Q9ULP9 559 aa6.4□□□□□ -1.38
USF1-210ENST00000531842 GPR132Q9UNW8 380 aa6.4□□□□□ -1.38
USF1-210ENST00000531842 A0A1B0GU03 582 aa6.39□□□□□ -1.39
USF1-210ENST00000531842 A0A1W2PS18 150 aa6.39□□□□□ -1.39
USF1-210ENST00000531842 CORTO00230 105 aa6.39□□□□□ -1.39
USF1-210ENST00000531842 TMEM50AO95807 157 aa6.39□□□□□ -1.39
USF1-210ENST00000531842 HTN3P15516 51 aa6.39□□□□□ -1.39
USF1-210ENST00000531842 OPRK1P41145 380 aa6.39□□□□□ -1.39
USF1-210ENST00000531842 ETV6P41212 452 aa6.39□□□□□ -1.39
USF1-210ENST00000531842 FXYD7P58549 80 aa6.39□□□□□ -1.39
USF1-210ENST00000531842 KLF9Q13886 244 aaPredicted RBP6.39□□□□□ -1.39
USF1-210ENST00000531842 C1orf134Q5TEV5 83 aa6.39□□□□□ -1.39
USF1-210ENST00000531842 Q8N1X5 172 aa6.39□□□□□ -1.39
USF1-210ENST00000531842 OR51S1Q8NGJ8 323 aa6.39□□□□□ -1.39
USF1-210ENST00000531842 MCFD2Q8NI22 146 aa6.39□□□□□ -1.39
USF1-210ENST00000531842 GLYATL2Q8WU03 294 aa6.39□□□□□ -1.39
USF1-210ENST00000531842 RRNAD1Q96FB5 475 aaKnown RBP6.39□□□□□ -1.39
USF1-210ENST00000531842 ZNF486Q96H40 463 aaPredicted RBP6.39□□□□□ -1.39
USF1-210ENST00000531842 VSIRQ9H7M9 311 aa6.39□□□□□ -1.39
USF1-210ENST00000531842 ZFAND3Q9H8U3 227 aa6.39□□□□□ -1.39
USF1-210ENST00000531842 COPZ2Q9P299 210 aa6.39□□□□□ -1.39
USF1-210ENST00000531842 XCL2Q9UBD3 114 aa6.39□□□□□ -1.39
USF1-210ENST00000531842 FLG2Q5D862 2391 aaPredicted RBP6.39□□□□□ -1.39
USF1-210ENST00000531842 TRAV2A0A0B4J234 112 aa6.38□□□□□ -1.39
USF1-210ENST00000531842 C3orf85A0A1B0GTC6 90 aa6.38□□□□□ -1.39
USF1-210ENST00000531842 CDK2AP2O75956 126 aa6.38□□□□□ -1.39
USF1-210ENST00000531842 IFNA21P01568 189 aa6.38□□□□□ -1.39
USF1-210ENST00000531842 UCP1P25874 307 aa6.38□□□□□ -1.39
USF1-210ENST00000531842 SUPT4H1P63272 117 aaKnown RBP6.38□□□□□ -1.39
USF1-210ENST00000531842 MRPS10P82664 201 aaKnown RBP6.38□□□□□ -1.39
USF1-210ENST00000531842 SCGB2B2Q4G0G5 96 aa6.38□□□□□ -1.39
USF1-210ENST00000531842 AARDQ4LEZ3 155 aa6.38□□□□□ -1.39
USF1-210ENST00000531842 C15orf40Q8WUR7 153 aa6.38□□□□□ -1.39
USF1-210ENST00000531842 GRAMD2BQ96HH9 432 aa6.38□□□□□ -1.39
USF1-210ENST00000531842 SDHCQ99643 169 aaPredicted RBP6.38□□□□□ -1.39
USF1-210ENST00000531842 PRR13Q9NZ81 148 aa6.38□□□□□ -1.39
USF1-210ENST00000531842 MRPL36Q9P0J6 103 aaKnown RBP6.38□□□□□ -1.39
USF1-210ENST00000531842 RSL24D1Q9UHA3 163 aaKnown RBP6.38□□□□□ -1.39
USF1-210ENST00000531842 FABP12A6NFH5 140 aa6.37□□□□□ -1.39
USF1-210ENST00000531842 CRYM-AS1A6NIL9 109 aa6.37□□□□□ -1.39
USF1-210ENST00000531842 K7EQG2 157 aa6.37□□□□□ -1.39
USF1-210ENST00000531842 CLN5O75503 358 aa6.37□□□□□ -1.39
USF1-210ENST00000531842 CDS2O95674 445 aa6.37□□□□□ -1.39
USF1-210ENST00000531842 OR5AC1P0C628 307 aa6.37□□□□□ -1.39
USF1-210ENST00000531842 AKAIN1P0CW23 69 aa6.37□□□□□ -1.39
USF1-210ENST00000531842 FUSP35637 526 aaKnown RBP eCLIP6.37□□□□□ -1.39
USF1-210ENST00000531842 P2RY1P47900 373 aa6.37□□□□□ -1.39
USF1-210ENST00000531842 EIF2B2P49770 351 aaKnown RBP6.37□□□□□ -1.39
USF1-210ENST00000531842 MLANAQ16655 118 aa6.37□□□□□ -1.39
USF1-210ENST00000531842 TMEM41BQ5BJD5 291 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms