RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, human

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN11-204	ENST00000531326	SPANXN5	Q5MJ07	72 aa		13.5	□□□□□ -0.25
PTPN11-204	ENST00000531326	UBAC2	Q8NBM4	344 aa		13.5	□□□□□ -0.25
PTPN11-204	ENST00000531326	BSCL2	Q96G97	398 aa	Predicted RBP	13.5	□□□□□ -0.25
PTPN11-204	ENST00000531326	ZNF414	Q96IQ9	312 aa		13.5	□□□□□ -0.25
PTPN11-204	ENST00000531326	RAB40C	Q96S21	281 aa		13.5	□□□□□ -0.25
PTPN11-204	ENST00000531326	CHRDL1	Q9BU40	450 aa		13.5	□□□□□ -0.25
PTPN11-204	ENST00000531326	NMES1	Q9C002	83 aa		13.5	□□□□□ -0.25
PTPN11-204	ENST00000531326	PSENEN	Q9NZ42	101 aa		13.5	□□□□□ -0.25
PTPN11-204	ENST00000531326	LSM5	Q9Y4Y9	91 aa	Known RBP	13.5	□□□□□ -0.25
PTPN11-204	ENST00000531326	IZUMO1R	A6ND01	250 aa		13.49	□□□□□ -0.25
PTPN11-204	ENST00000531326	IFNA4	P05014	189 aa		13.49	□□□□□ -0.25
PTPN11-204	ENST00000531326	CTSG	P08311	255 aa		13.49	□□□□□ -0.25
PTPN11-204	ENST00000531326	TAS2R30	P59541	319 aa		13.49	□□□□□ -0.25
PTPN11-204	ENST00000531326	RPP30	P78346	268 aa	Known RBP	13.49	□□□□□ -0.25
PTPN11-204	ENST00000531326	RAB32	Q13637	225 aa		13.49	□□□□□ -0.25
PTPN11-204	ENST00000531326	STRAP	Q9Y3F4	350 aa	Known RBP	13.49	□□□□□ -0.25
PTPN11-204	ENST00000531326	RPS10-NUDT3	A0A1W2PQS6	291 aa		13.48	□□□□□ -0.25
PTPN11-204	ENST00000531326	PRSS46	E5RG02	174 aa		13.48	□□□□□ -0.25
PTPN11-204	ENST00000531326	CXCL3	P19876	107 aa		13.48	□□□□□ -0.25
PTPN11-204	ENST00000531326	S100A10	P60903	97 aa		13.48	□□□□□ -0.25
PTPN11-204	ENST00000531326	RAB11A	P62491	216 aa		13.48	□□□□□ -0.25
PTPN11-204	ENST00000531326	FCN2	Q15485	313 aa		13.48	□□□□□ -0.25
PTPN11-204	ENST00000531326	PRSS54	Q6PEW0	395 aa		13.48	□□□□□ -0.25
PTPN11-204	ENST00000531326	SPSB3	Q6PJ21	355 aa		13.48	□□□□□ -0.25
PTPN11-204	ENST00000531326	OR4X1	Q8NH49	305 aa		13.48	□□□□□ -0.25
PTPN11-204	ENST00000531326	SIGLEC8	Q9NYZ4	499 aa		13.48	□□□□□ -0.25
PTPN11-204	ENST00000531326	PAIP2B	Q9ULR5	123 aa	Known RBP	13.48	□□□□□ -0.25
PTPN11-204	ENST00000531326	PMS2P5	A8MQ11	134 aa		13.47	□□□□□ -0.25
PTPN11-204	ENST00000531326	TSC22D2	O75157	780 aa		13.47	□□□□□ -0.25
PTPN11-204	ENST00000531326	SLC25A4	P12235	298 aa		13.47	□□□□□ -0.25
PTPN11-204	ENST00000531326	NPBWR1	P48145	328 aa		13.47	□□□□□ -0.25
PTPN11-204	ENST00000531326	ETFRF1	Q6IPR1	90 aa		13.47	□□□□□ -0.25
PTPN11-204	ENST00000531326	TMEM14EP	Q6UXP3	125 aa		13.47	□□□□□ -0.25
PTPN11-204	ENST00000531326	SLC16A13	Q7RTY0	426 aa		13.47	□□□□□ -0.25
PTPN11-204	ENST00000531326	GPHB5	Q86YW7	130 aa		13.47	□□□□□ -0.25
PTPN11-204	ENST00000531326	OR11H7	Q8NGC8	314 aa		13.47	□□□□□ -0.25
PTPN11-204	ENST00000531326	MED28	Q9H204	178 aa		13.47	□□□□□ -0.25
PTPN11-204	ENST00000531326	IGHV3-35	A0A0C4DH35	117 aa		13.46	□□□□□ -0.25
PTPN11-204	ENST00000531326	GNG7	O60262	68 aa		13.46	□□□□□ -0.25
PTPN11-204	ENST00000531326	CLN5	O75503	358 aa		13.46	□□□□□ -0.25
PTPN11-204	ENST00000531326	CCNK	O75909	580 aa		13.46	□□□□□ -0.25
PTPN11-204	ENST00000531326	GPX4	P36969	197 aa	Predicted RBP	13.46	□□□□□ -0.25
PTPN11-204	ENST00000531326	RND2	P52198	227 aa		13.46	□□□□□ -0.25
PTPN11-204	ENST00000531326	CYCS	P99999	105 aa	Known RBP	13.46	□□□□□ -0.25
PTPN11-204	ENST00000531326	LCN12	Q6JVE5	192 aa		13.46	□□□□□ -0.25
PTPN11-204	ENST00000531326	GTSCR1	Q86UQ5	136 aa		13.46	□□□□□ -0.25
PTPN11-204	ENST00000531326	TMEM116	Q8NCL8	245 aa		13.46	□□□□□ -0.25
PTPN11-204	ENST00000531326	ZNF436	Q9C0F3	470 aa	Predicted RBP	13.46	□□□□□ -0.25
PTPN11-204	ENST00000531326	TUBA4B	Q9H853	241 aa		13.46	□□□□□ -0.25
PTPN11-204	ENST00000531326	RETN	Q9HD89	108 aa		13.46	□□□□□ -0.25
PTPN11-204	ENST00000531326		H0YIZ8	118 aa		13.45	□□□□□ -0.26
PTPN11-204	ENST00000531326		L7N2F9	121 aa		13.45	□□□□□ -0.26
PTPN11-204	ENST00000531326	LGALS9	O00182	355 aa		13.45	□□□□□ -0.26
PTPN11-204	ENST00000531326	NUPL2	O15504	423 aa	Known RBP	13.45	□□□□□ -0.26
PTPN11-204	ENST00000531326	VAMP2	P63027	116 aa		13.45	□□□□□ -0.26
PTPN11-204	ENST00000531326	UNQ9165/PRO28630	Q6UXU0	137 aa		13.45	□□□□□ -0.26
PTPN11-204	ENST00000531326	LINC00322	Q6ZN03	302 aa	Predicted RBP	13.45	□□□□□ -0.26
PTPN11-204	ENST00000531326	PPP1R1C	Q8WVI7	109 aa		13.45	□□□□□ -0.26
PTPN11-204	ENST00000531326	CACNG8	Q8WXS5	425 aa		13.45	□□□□□ -0.26
PTPN11-204	ENST00000531326	DEDD	O75618	318 aa		13.44	□□□□□ -0.26
PTPN11-204	ENST00000531326	METTL15P1	P0C7V9	234 aa		13.44	□□□□□ -0.26
PTPN11-204	ENST00000531326	RRAS2	P62070	204 aa	Predicted RBP	13.44	□□□□□ -0.26
PTPN11-204	ENST00000531326	GAMT	Q14353	236 aa		13.44	□□□□□ -0.26
PTPN11-204	ENST00000531326	LRRC37A5P	Q49AS3	106 aa		13.44	□□□□□ -0.26
PTPN11-204	ENST00000531326	FAM106A	Q4KMX7	169 aa		13.44	□□□□□ -0.26
PTPN11-204	ENST00000531326	NPIPB3	Q92617	1050 aa		13.44	□□□□□ -0.26
PTPN11-204	ENST00000531326	ACY3	Q96HD9	319 aa		13.44	□□□□□ -0.26
PTPN11-204	ENST00000531326	PLEC	Q15149	4684 aa	Known RBP	13.44	□□□□□ -0.26
PTPN11-204	ENST00000531326	FAM24A	A6NFZ4	105 aa		13.43	□□□□□ -0.26
PTPN11-204	ENST00000531326	IGKV1-17	P01599	117 aa		13.43	□□□□□ -0.26
PTPN11-204	ENST00000531326	IGLC1	P0CG04	106 aa		13.43	□□□□□ -0.26
PTPN11-204	ENST00000531326	PVALB	P20472	110 aa	Predicted RBP	13.43	□□□□□ -0.26
PTPN11-204	ENST00000531326	TMEM190	Q8WZ59	177 aa		13.43	□□□□□ -0.26
PTPN11-204	ENST00000531326	SLC35E1	Q96K37	410 aa		13.43	□□□□□ -0.26
PTPN11-204	ENST00000531326	LYRM2	Q9NU23	88 aa	Predicted RBP	13.43	□□□□□ -0.26
PTPN11-204	ENST00000531326	OR5AC2	Q9NZP5	309 aa		13.43	□□□□□ -0.26
PTPN11-204	ENST00000531326	ZNF320	A2RRD8	509 aa		13.42	□□□□□ -0.26
PTPN11-204	ENST00000531326		A8MWP6	167 aa		13.42	□□□□□ -0.26
PTPN11-204	ENST00000531326	NDUFA4	O00483	81 aa		13.42	□□□□□ -0.26
PTPN11-204	ENST00000531326	MPC2	O95563	127 aa		13.42	□□□□□ -0.26
PTPN11-204	ENST00000531326	EDN2	P20800	178 aa		13.42	□□□□□ -0.26
PTPN11-204	ENST00000531326	BCAP31	P51572	246 aa		13.42	□□□□□ -0.26
PTPN11-204	ENST00000531326	CAV2	P51636	162 aa		13.42	□□□□□ -0.26
PTPN11-204	ENST00000531326	REL	Q04864	619 aa	Predicted RBP	13.42	□□□□□ -0.26
PTPN11-204	ENST00000531326	ARL16	Q0P5N6	197 aa		13.42	□□□□□ -0.26
PTPN11-204	ENST00000531326	TIGIT	Q495A1	244 aa		13.42	□□□□□ -0.26
PTPN11-204	ENST00000531326	CD300E	Q496F6	205 aa	Predicted RBP	13.42	□□□□□ -0.26
PTPN11-204	ENST00000531326	OR8G2P	Q6IF36	304 aa		13.42	□□□□□ -0.26
PTPN11-204	ENST00000531326	ACOT7L	Q6ZUV0	252 aa		13.42	□□□□□ -0.26
PTPN11-204	ENST00000531326	OR1S2	Q8NGQ3	325 aa		13.42	□□□□□ -0.26
PTPN11-204	ENST00000531326	OR2K2	Q8NGT1	345 aa		13.42	□□□□□ -0.26
PTPN11-204	ENST00000531326	FAM110A	Q9BQ89	295 aa		13.42	□□□□□ -0.26
PTPN11-204	ENST00000531326	RNF126	Q9BV68	326 aa		13.42	□□□□□ -0.26
PTPN11-204	ENST00000531326	PEMT	Q9UBM1	199 aa		13.42	□□□□□ -0.26
PTPN11-204	ENST00000531326	IGKV1D-37	A0A075B6S9	117 aa		13.41	□□□□□ -0.26
PTPN11-204	ENST00000531326	TRAV30	A0A087WSZ9	112 aa		13.41	□□□□□ -0.26
PTPN11-204	ENST00000531326	IGSF23	A1L1A6	192 aa		13.41	□□□□□ -0.26
PTPN11-204	ENST00000531326	TMEM213	A2RRL7	107 aa		13.41	□□□□□ -0.26
PTPN11-204	ENST00000531326	ZNF785	A8K8V0	405 aa		13.41	□□□□□ -0.26
PTPN11-204	ENST00000531326	OR10J1	P30954	320 aa		13.41	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms