RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 TRAV12-1A0A0B4J245 112 aa6.07□□□□□ -1.44
CTNND1-229ENST00000531014 hADV29S1A0JD25 119 aa6.07□□□□□ -1.44
CTNND1-229ENST00000531014 K7EP13 123 aa6.07□□□□□ -1.44
CTNND1-229ENST00000531014 TCRAP04437 139 aa6.07□□□□□ -1.44
CTNND1-229ENST00000531014 PRIMA1Q86XR5 153 aa6.07□□□□□ -1.44
CTNND1-229ENST00000531014 AMN1Q8IY45 258 aa6.07□□□□□ -1.44
CTNND1-229ENST00000531014 RPRMLQ8N4K4 120 aa6.07□□□□□ -1.44
CTNND1-229ENST00000531014 UBE2E2Q96LR5 201 aa6.07□□□□□ -1.44
CTNND1-229ENST00000531014 RBBP6Q7Z6E9 1792 aaKnown RBP6.07□□□□□ -1.44
CTNND1-229ENST00000531014 A0A1B0GTL3 188 aa6.07□□□□□ -1.44
CTNND1-229ENST00000531014 SMAD7O15105 426 aaKnown RBP6.07□□□□□ -1.44
CTNND1-229ENST00000531014 RPL34P49207 117 aaKnown RBP6.07□□□□□ -1.44
CTNND1-229ENST00000531014 CCL8P80075 99 aa6.07□□□□□ -1.44
CTNND1-229ENST00000531014 C1orf100Q5SVJ3 147 aa6.07□□□□□ -1.44
CTNND1-229ENST00000531014 BHLHA9Q7RTU4 235 aa6.07□□□□□ -1.44
CTNND1-229ENST00000531014 DTX1Q86Y01 620 aa6.07□□□□□ -1.44
CTNND1-229ENST00000531014 C1QL4Q86Z23 238 aa6.07□□□□□ -1.44
CTNND1-229ENST00000531014 CXCL16Q9H2A7 254 aa6.07□□□□□ -1.44
CTNND1-229ENST00000531014 IGHV3-49A0A0A0MS15 119 aa6.07□□□□□ -1.44
CTNND1-229ENST00000531014 NDUFS5O43920 106 aa6.07□□□□□ -1.44
CTNND1-229ENST00000531014 IGLV3-25P01717 112 aa6.07□□□□□ -1.44
CTNND1-229ENST00000531014 Q5BKY6 102 aa6.07□□□□□ -1.44
CTNND1-229ENST00000531014 SAXO1Q8IYX7 474 aa6.07□□□□□ -1.44
CTNND1-229ENST00000531014 SRSF8Q9BRL6 282 aaKnown RBP6.07□□□□□ -1.44
CTNND1-229ENST00000531014 C21orf62Q9NYP8 219 aa6.07□□□□□ -1.44
CTNND1-229ENST00000531014 NINQ8N4C6 2090 aa6.07□□□□□ -1.44
CTNND1-229ENST00000531014 IGHV3-66A0A0C4DH42 116 aa6.06□□□□□ -1.44
CTNND1-229ENST00000531014 MIR17HGQ75NE6 70 aa6.06□□□□□ -1.44
CTNND1-229ENST00000531014 C15orf53Q8NAA6 179 aa6.06□□□□□ -1.44
CTNND1-229ENST00000531014 TMEM242Q9NWH2 141 aa6.06□□□□□ -1.44
CTNND1-229ENST00000531014 ASCC3Q8N3C0 2202 aaKnown RBP6.06□□□□□ -1.44
CTNND1-229ENST00000531014 F5P12259 2224 aa6.06□□□□□ -1.44
CTNND1-229ENST00000531014 IGHG4P01861 327 aa6.06□□□□□ -1.44
CTNND1-229ENST00000531014 ATP5J2P56134 94 aa6.06□□□□□ -1.44
CTNND1-229ENST00000531014 ZC2HC1BQ5TFG8 222 aa6.06□□□□□ -1.44
CTNND1-229ENST00000531014 SLC25A48Q6ZT89 311 aaKnown RBP6.06□□□□□ -1.44
CTNND1-229ENST00000531014 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.06□□□□□ -1.44
CTNND1-229ENST00000531014 SPTSSBQ8NFR3 76 aa6.06□□□□□ -1.44
CTNND1-229ENST00000531014 SLC25A38Q96DW6 304 aa6.06□□□□□ -1.44
CTNND1-229ENST00000531014 TIMM21Q9BVV7 248 aa6.06□□□□□ -1.44
CTNND1-229ENST00000531014 KNL1Q8NG31 2342 aa6.06□□□□□ -1.44
CTNND1-229ENST00000531014 TRBV5-5A0A0J9YX44 114 aa6.06□□□□□ -1.44
CTNND1-229ENST00000531014 UCP2P55851 309 aa6.06□□□□□ -1.44
CTNND1-229ENST00000531014 NANOS3P60323 173 aaKnown RBP6.06□□□□□ -1.44
CTNND1-229ENST00000531014 TFF3Q07654 80 aa6.06□□□□□ -1.44
CTNND1-229ENST00000531014 FBXL7Q9UJT9 491 aa6.06□□□□□ -1.44
CTNND1-229ENST00000531014 EVPLQ92817 2033 aa6.06□□□□□ -1.44
CTNND1-229ENST00000531014 TRAV25A0A0B4J276 109 aa6.06□□□□□ -1.44
CTNND1-229ENST00000531014 LOC101059948A0A1B0GTJ6 334 aa6.06□□□□□ -1.44
CTNND1-229ENST00000531014 C9orf118A6NHY6 69 aa6.06□□□□□ -1.44
CTNND1-229ENST00000531014 LY6EQ16553 131 aa6.06□□□□□ -1.44
CTNND1-229ENST00000531014 FAM27BQ5VT28 67 aa6.06□□□□□ -1.44
CTNND1-229ENST00000531014 ZAR1Q86SH2 424 aa6.06□□□□□ -1.44
CTNND1-229ENST00000531014 HAPLN4Q86UW8 402 aa6.06□□□□□ -1.44
CTNND1-229ENST00000531014 DMRTC2Q8IXT2 367 aaPredicted RBP6.06□□□□□ -1.44
CTNND1-229ENST00000531014 TMEM190Q8WZ59 177 aa6.06□□□□□ -1.44
CTNND1-229ENST00000531014 KCNK17Q96T54 332 aa6.06□□□□□ -1.44
CTNND1-229ENST00000531014 PRORYQ9H606 182 aa6.06□□□□□ -1.44
CTNND1-229ENST00000531014 KLF2Q9Y5W3 355 aaPredicted RBP6.06□□□□□ -1.44
CTNND1-229ENST00000531014 RALGAPA2Q2PPJ7 1873 aa6.06□□□□□ -1.44
CTNND1-229ENST00000531014 ZDBF2Q9HCK1 2354 aa6.06□□□□□ -1.44
CTNND1-229ENST00000531014 A8MWP6 167 aa6.05□□□□□ -1.44
CTNND1-229ENST00000531014 E9PLN8 166 aa6.05□□□□□ -1.44
CTNND1-229ENST00000531014 SYS1-DBNDD2H3BUS1 97 aa6.05□□□□□ -1.44
CTNND1-229ENST00000531014 C3orf79P0CE67 100 aa6.05□□□□□ -1.44
CTNND1-229ENST00000531014 MP68P56378 58 aa6.05□□□□□ -1.44
CTNND1-229ENST00000531014 KIAA0040Q15053 153 aa6.05□□□□□ -1.44
CTNND1-229ENST00000531014 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.05□□□□□ -1.44
CTNND1-229ENST00000531014 TEX38Q6PEX7 206 aa6.05□□□□□ -1.44
CTNND1-229ENST00000531014 OSR1Q8TAX0 266 aaPredicted RBP6.05□□□□□ -1.44
CTNND1-229ENST00000531014 TMEM167AQ8TBQ9 72 aa6.05□□□□□ -1.44
CTNND1-229ENST00000531014 PSG8Q9UQ74 426 aa6.05□□□□□ -1.44
CTNND1-229ENST00000531014 TCRBV5S1A1TA0A578 114 aa6.05□□□□□ -1.44
CTNND1-229ENST00000531014 K7EP34 96 aa6.05□□□□□ -1.44
CTNND1-229ENST00000531014 SEC61GP60059 68 aa6.05□□□□□ -1.44
CTNND1-229ENST00000531014 GNG5P63218 68 aa6.05□□□□□ -1.44
CTNND1-229ENST00000531014 KLRD1Q13241 179 aa6.05□□□□□ -1.44
CTNND1-229ENST00000531014 C20orf204Q6ZNR8 217 aa6.05□□□□□ -1.44
CTNND1-229ENST00000531014 MUC6Q6W4X9 2439 aa6.05□□□□□ -1.44
CTNND1-229ENST00000531014 CRLF1O75462 422 aa6.05□□□□□ -1.44
CTNND1-229ENST00000531014 MYOD1P15172 320 aa6.05□□□□□ -1.44
CTNND1-229ENST00000531014 ZNF876PQ49A33 203 aa6.05□□□□□ -1.44
CTNND1-229ENST00000531014 COL11A1P12107 1806 aaPredicted RBP6.05□□□□□ -1.44
CTNND1-229ENST00000531014 EREGO14944 169 aa6.05□□□□□ -1.44
CTNND1-229ENST00000531014 PDLIM4P50479 330 aa6.05□□□□□ -1.44
CTNND1-229ENST00000531014 MORN5Q5VZ52 161 aa6.05□□□□□ -1.44
CTNND1-229ENST00000531014 STHQ8IWL8 128 aa6.05□□□□□ -1.44
CTNND1-229ENST00000531014 LY6G5BQ8NDX9 201 aa6.05□□□□□ -1.44
CTNND1-229ENST00000531014 ITLN1Q8WWA0 313 aa6.05□□□□□ -1.44
CTNND1-229ENST00000531014 GPHA2Q96T91 129 aa6.05□□□□□ -1.44
CTNND1-229ENST00000531014 RPUSD1Q9UJJ7 312 aaKnown RBP6.05□□□□□ -1.44
CTNND1-229ENST00000531014 LSM4Q9Y4Z0 139 aaKnown RBP6.05□□□□□ -1.44
CTNND1-229ENST00000531014 VCYO14598 125 aa6.04□□□□□ -1.44
CTNND1-229ENST00000531014 IGHG2P01859 326 aa6.04□□□□□ -1.44
CTNND1-229ENST00000531014 RPL36AP83881 106 aaKnown RBP6.04□□□□□ -1.44
CTNND1-229ENST00000531014 C9orf40Q8IXQ3 194 aa6.04□□□□□ -1.44
CTNND1-229ENST00000531014 RPL36ALQ969Q0 106 aaKnown RBP6.04□□□□□ -1.44
CTNND1-229ENST00000531014 PDFQ9HBH1 243 aa6.04□□□□□ -1.44
CTNND1-229ENST00000531014 PEMTQ9UBM1 199 aa6.04□□□□□ -1.44
CTNND1-229ENST00000531014 COL4A1P02462 1669 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms