RNA–Protein interactions for RNA: ENST00000530724.1

TRIM3-210, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 651 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-210ENST00000530724 TMEM14CQ9P0S9 112 aa9.47□□□□□ -0.89
TRIM3-210ENST00000530724 U3KQK5 164 aa9.47□□□□□ -0.89
TRIM3-210ENST00000530724 DOCK11Q5JSL3 2073 aa9.47□□□□□ -0.89
TRIM3-210ENST00000530724 IGKV1D-37A0A075B6S9 117 aa9.46□□□□□ -0.9
TRIM3-210ENST00000530724 C7orf71A4D174 169 aa9.46□□□□□ -0.9
TRIM3-210ENST00000530724 TIMM8AO60220 97 aaPredicted RBP9.46□□□□□ -0.9
TRIM3-210ENST00000530724 CSN1S1P47710 185 aa9.46□□□□□ -0.9
TRIM3-210ENST00000530724 SUB1P53999 127 aaKnown RBP eCLIP9.46□□□□□ -0.9
TRIM3-210ENST00000530724 ERHP84090 104 aaKnown RBP9.46□□□□□ -0.9
TRIM3-210ENST00000530724 RNF151Q2KHN1 245 aa9.46□□□□□ -0.9
TRIM3-210ENST00000530724 LINC01559Q495D7 138 aa9.46□□□□□ -0.9
TRIM3-210ENST00000530724 ALKBH2Q6NS38 261 aa9.46□□□□□ -0.9
TRIM3-210ENST00000530724 ZNF493Q6ZR52 646 aa9.46□□□□□ -0.9
TRIM3-210ENST00000530724 PDPNQ86YL7 162 aa9.46□□□□□ -0.9
TRIM3-210ENST00000530724 BPIFA4PQ86YQ2 179 aa9.46□□□□□ -0.9
TRIM3-210ENST00000530724 OR5AN1Q8NGI8 311 aa9.46□□□□□ -0.9
TRIM3-210ENST00000530724 TRGV9Q99603 122 aa9.46□□□□□ -0.9
TRIM3-210ENST00000530724 DCTN5Q9BTE1 182 aa9.46□□□□□ -0.9
TRIM3-210ENST00000530724 COL25A1Q9BXS0 654 aaPredicted RBP9.46□□□□□ -0.9
TRIM3-210ENST00000530724 RPUSD1Q9UJJ7 312 aaKnown RBP9.46□□□□□ -0.9
TRIM3-210ENST00000530724 MED12LQ86YW9 2145 aa9.46□□□□□ -0.9
TRIM3-210ENST00000530724 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.45□□□□□ -0.9
TRIM3-210ENST00000530724 hDV102S1A0JD36 115 aa9.45□□□□□ -0.9
TRIM3-210ENST00000530724 GAGE10A6NGK3 116 aa9.45□□□□□ -0.9
TRIM3-210ENST00000530724 VSTM5A8MXK1 200 aa9.45□□□□□ -0.9
TRIM3-210ENST00000530724 P01737 135 aa9.45□□□□□ -0.9
TRIM3-210ENST00000530724 IGHG3P01860 377 aa9.45□□□□□ -0.9
TRIM3-210ENST00000530724 CT45A6P0DMU7 189 aa9.45□□□□□ -0.9
TRIM3-210ENST00000530724 CT45A5P0DMU8 189 aa9.45□□□□□ -0.9
TRIM3-210ENST00000530724 CT45A7P0DMV0 189 aa9.45□□□□□ -0.9
TRIM3-210ENST00000530724 HLA-DRB4P13762 266 aa9.45□□□□□ -0.9
TRIM3-210ENST00000530724 GATA2P23769 480 aaPredicted RBP9.45□□□□□ -0.9
TRIM3-210ENST00000530724 TMEM164Q5U3C3 297 aa9.45□□□□□ -0.9
TRIM3-210ENST00000530724 ETFRF1Q6IPR1 90 aa9.45□□□□□ -0.9
TRIM3-210ENST00000530724 RPRMLQ8N4K4 120 aa9.45□□□□□ -0.9
TRIM3-210ENST00000530724 TPRX1Q8N7U7 411 aa9.45□□□□□ -0.9
TRIM3-210ENST00000530724 OR10X1Q8NGY0 326 aa9.45□□□□□ -0.9
TRIM3-210ENST00000530724 VSTM2AQ8TAG5 236 aa9.45□□□□□ -0.9
TRIM3-210ENST00000530724 ITLN1Q8WWA0 313 aa9.45□□□□□ -0.9
TRIM3-210ENST00000530724 HLA-DRB4X5D2U9 266 aa9.45□□□□□ -0.9
TRIM3-210ENST00000530724 MKI67P46013 3256 aaKnown RBP9.45□□□□□ -0.9
TRIM3-210ENST00000530724 LINC01546A6NGU7 62 aa9.44□□□□□ -0.9
TRIM3-210ENST00000530724 CBY3A6NI87 242 aa9.44□□□□□ -0.9
TRIM3-210ENST00000530724 IGHV3-13P01766 116 aa9.44□□□□□ -0.9
TRIM3-210ENST00000530724 SPINK2P20155 84 aa9.44□□□□□ -0.9
TRIM3-210ENST00000530724 GPR6P46095 362 aaPredicted RBP9.44□□□□□ -0.9
TRIM3-210ENST00000530724 MEOX1P50221 254 aa9.44□□□□□ -0.9
TRIM3-210ENST00000530724 MORN5Q5VZ52 161 aa9.44□□□□□ -0.9
TRIM3-210ENST00000530724 COX8CQ7Z4L0 72 aa9.44□□□□□ -0.9
TRIM3-210ENST00000530724 LINC00311Q8N616 119 aa9.44□□□□□ -0.9
TRIM3-210ENST00000530724 LINC00479Q96M42 142 aa9.44□□□□□ -0.9
TRIM3-210ENST00000530724 OTORQ9NRC9 128 aa9.44□□□□□ -0.9
TRIM3-210ENST00000530724 HIGD1BQ9P298 99 aa9.44□□□□□ -0.9
TRIM3-210ENST00000530724 COL27A1Q8IZC6 1860 aaPredicted RBP9.44□□□□□ -0.9
TRIM3-210ENST00000530724 TRGV5A0A0B4J1U4 118 aa9.43□□□□□ -0.9
TRIM3-210ENST00000530724 MOSP00540 346 aa9.43□□□□□ -0.9
TRIM3-210ENST00000530724 TCRAP04437 139 aa9.43□□□□□ -0.9
TRIM3-210ENST00000530724 SAA1P0DJI8 122 aaPredicted RBP9.43□□□□□ -0.9
TRIM3-210ENST00000530724 GP9P14770 177 aa9.43□□□□□ -0.9
TRIM3-210ENST00000530724 CAMPP49913 170 aa9.43□□□□□ -0.9
TRIM3-210ENST00000530724 ZNF137PP52743 207 aa9.43□□□□□ -0.9
TRIM3-210ENST00000530724 RBPJQ06330 500 aa9.43□□□□□ -0.9
TRIM3-210ENST00000530724 RIGQ13278 110 aa9.43□□□□□ -0.9
TRIM3-210ENST00000530724 EDDM3AQ14507 147 aa9.43□□□□□ -0.9
TRIM3-210ENST00000530724 LINC00173Q6ZV60 143 aa9.43□□□□□ -0.9
TRIM3-210ENST00000530724 SVIPQ8NHG7 77 aa9.43□□□□□ -0.9
TRIM3-210ENST00000530724 PLPPR2Q96GM1 343 aa9.43□□□□□ -0.9
TRIM3-210ENST00000530724 SSBP4Q9BWG4 385 aaPredicted RBP9.43□□□□□ -0.9
TRIM3-210ENST00000530724 MEGF9Q9H1U4 602 aa9.43□□□□□ -0.9
TRIM3-210ENST00000530724 C12orf49Q9H741 205 aa9.43□□□□□ -0.9
TRIM3-210ENST00000530724 AP5S1Q9NUS5 200 aa9.43□□□□□ -0.9
TRIM3-210ENST00000530724 SPRR3Q9UBC9 169 aa9.43□□□□□ -0.9
TRIM3-210ENST00000530724 RNF24Q9Y225 148 aa9.43□□□□□ -0.9
TRIM3-210ENST00000530724 GON4LQ3T8J9 2241 aa9.43□□□□□ -0.9
TRIM3-210ENST00000530724 CABIN1Q9Y6J0 2220 aa9.42□□□□□ -0.9
TRIM3-210ENST00000530724 TRAV5A0A0B4J249 113 aa9.42□□□□□ -0.9
TRIM3-210ENST00000530724 CECR9P0C854 216 aa9.42□□□□□ -0.9
TRIM3-210ENST00000530724 ZNF883P0CG24 379 aa9.42□□□□□ -0.9
TRIM3-210ENST00000530724 HTR1DP28221 377 aa9.42□□□□□ -0.9
TRIM3-210ENST00000530724 CCL11P51671 97 aa9.42□□□□□ -0.9
TRIM3-210ENST00000530724 MEF2CQ06413 473 aaPredicted RBP9.42□□□□□ -0.9
TRIM3-210ENST00000530724 MOB3BQ86TA1 216 aa9.42□□□□□ -0.9
TRIM3-210ENST00000530724 Q86TA4 180 aa9.42□□□□□ -0.9
TRIM3-210ENST00000530724 LYPD1Q8N2G4 141 aa9.42□□□□□ -0.9
TRIM3-210ENST00000530724 TMEM116Q8NCL8 245 aa9.42□□□□□ -0.9
TRIM3-210ENST00000530724 OR1B1Q8NGR6 318 aa9.42□□□□□ -0.9
TRIM3-210ENST00000530724 HES7Q9BYE0 225 aa9.42□□□□□ -0.9
TRIM3-210ENST00000530724 SIGLEC8Q9NYZ4 499 aa9.42□□□□□ -0.9
TRIM3-210ENST00000530724 SMPXQ9UHP9 88 aa9.42□□□□□ -0.9
TRIM3-210ENST00000530724 ARHGAP21Q5T5U3 1957 aa9.42□□□□□ -0.9
TRIM3-210ENST00000530724 SDK2Q58EX2 2172 aa9.41□□□□□ -0.9
TRIM3-210ENST00000530724 IGLV3-9A0A075B6K5 115 aa9.41□□□□□ -0.9
TRIM3-210ENST00000530724 A0A1B0GUT8 65 aa9.41□□□□□ -0.9
TRIM3-210ENST00000530724 CHEK1O14757 476 aa9.41□□□□□ -0.9
TRIM3-210ENST00000530724 SMAD7O15105 426 aaKnown RBP9.41□□□□□ -0.9
TRIM3-210ENST00000530724 APOA2P02652 100 aa9.41□□□□□ -0.9
TRIM3-210ENST00000530724 SLC25A5P05141 298 aaKnown RBP9.41□□□□□ -0.9
TRIM3-210ENST00000530724 PYYP10082 97 aa9.41□□□□□ -0.9
TRIM3-210ENST00000530724 CD46P15529 392 aa9.41□□□□□ -0.9
TRIM3-210ENST00000530724 PAX8Q06710 450 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms