RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 EDN2P20800 178 aa16.23■□□□□ 0.19
CAPN1-220ENST00000530567 CAV2P51636 162 aa16.23■□□□□ 0.19
CAPN1-220ENST00000530567 TIGITQ495A1 244 aa16.23■□□□□ 0.19
CAPN1-220ENST00000530567 FAM106AQ4KMX7 169 aa16.23■□□□□ 0.19
CAPN1-220ENST00000530567 ADAMTSL5Q6ZMM2 481 aa16.23■□□□□ 0.19
CAPN1-220ENST00000530567 SLC35E1Q96K37 410 aa16.23■□□□□ 0.19
CAPN1-220ENST00000530567 IGKV1D-37A0A075B6S9 117 aa16.22■□□□□ 0.19
CAPN1-220ENST00000530567 IGSF23A1L1A6 192 aa16.22■□□□□ 0.19
CAPN1-220ENST00000530567 OR10J1P30954 320 aa16.22■□□□□ 0.19
CAPN1-220ENST00000530567 RELQ04864 619 aaPredicted RBP16.22■□□□□ 0.19
CAPN1-220ENST00000530567 OR1S2Q8NGQ3 325 aa16.22■□□□□ 0.19
CAPN1-220ENST00000530567 IGKV1OR2-108A0A075B7D4 117 aa16.21■□□□□ 0.19
CAPN1-220ENST00000530567 TRAV30A0A087WSZ9 112 aa16.21■□□□□ 0.19
CAPN1-220ENST00000530567 ZNF320A2RRD8 509 aa16.21■□□□□ 0.19
CAPN1-220ENST00000530567 C2orf70A6NJV1 201 aa16.21■□□□□ 0.19
CAPN1-220ENST00000530567 BCAP31P51572 246 aa16.21■□□□□ 0.19
CAPN1-220ENST00000530567 C9orf66Q5T8R8 295 aa16.21■□□□□ 0.19
CAPN1-220ENST00000530567 ZNF600Q6ZNG1 722 aa16.21■□□□□ 0.19
CAPN1-220ENST00000530567 TMEM252Q8N6L7 170 aa16.21■□□□□ 0.19
CAPN1-220ENST00000530567 PEMTQ9UBM1 199 aa16.21■□□□□ 0.19
CAPN1-220ENST00000530567 IGHV3OR16-8A0A075B7F1 116 aa16.2■□□□□ 0.18
CAPN1-220ENST00000530567 TRAV14DV4A0A0A6YYC5 116 aa16.2■□□□□ 0.18
CAPN1-220ENST00000530567 E5RGE8 158 aa16.2■□□□□ 0.18
CAPN1-220ENST00000530567 SAP30O75446 220 aa16.2■□□□□ 0.18
CAPN1-220ENST00000530567 DLK1P80370 383 aa16.2■□□□□ 0.18
CAPN1-220ENST00000530567 OR10P1Q8NGE3 313 aa16.2■□□□□ 0.18
CAPN1-220ENST00000530567 ZFAND3Q9H8U3 227 aa16.2■□□□□ 0.18
CAPN1-220ENST00000530567 SIGLEC8Q9NYZ4 499 aa16.2■□□□□ 0.18
CAPN1-220ENST00000530567 CST7O76096 145 aa16.19■□□□□ 0.18
CAPN1-220ENST00000530567 RLN2P04090 185 aa16.19■□□□□ 0.18
CAPN1-220ENST00000530567 GIPP09681 153 aaPredicted RBP16.19■□□□□ 0.18
CAPN1-220ENST00000530567 TM4SF20Q53R12 229 aa16.19■□□□□ 0.18
CAPN1-220ENST00000530567 KPRPQ5T749 579 aaPredicted RBP16.19■□□□□ 0.18
CAPN1-220ENST00000530567 TOMM20LQ6UXN7 152 aa16.19■□□□□ 0.18
CAPN1-220ENST00000530567 Q6ZNX1 250 aa16.19■□□□□ 0.18
CAPN1-220ENST00000530567 THAP8Q8NA92 274 aa16.19■□□□□ 0.18
CAPN1-220ENST00000530567 ELOVL1Q9BW60 279 aa16.19■□□□□ 0.18
CAPN1-220ENST00000530567 GPR61Q9BZJ8 451 aa16.19■□□□□ 0.18
CAPN1-220ENST00000530567 PUS1Q9Y606 427 aaKnown RBP eCLIP16.19■□□□□ 0.18
CAPN1-220ENST00000530567 PET100P0DJ07 73 aa16.19■□□□□ 0.18
CAPN1-220ENST00000530567 LYL1P12980 280 aa16.19■□□□□ 0.18
CAPN1-220ENST00000530567 P2RY1P47900 373 aa16.19■□□□□ 0.18
CAPN1-220ENST00000530567 SULT1A1P50225 295 aa16.19■□□□□ 0.18
CAPN1-220ENST00000530567 INSL3P51460 131 aa16.19■□□□□ 0.18
CAPN1-220ENST00000530567 ELLP55199 621 aaPredicted RBP16.19■□□□□ 0.18
CAPN1-220ENST00000530567 YPEL3P61236 119 aaPredicted RBP16.19■□□□□ 0.18
CAPN1-220ENST00000530567 BEAN1Q3B7T3 259 aa16.19■□□□□ 0.18
CAPN1-220ENST00000530567 CHAC2Q8WUX2 184 aa16.19■□□□□ 0.18
CAPN1-220ENST00000530567 ASB13Q8WXK3 278 aa16.19■□□□□ 0.18
CAPN1-220ENST00000530567 MBD2Q9UBB5 411 aa16.19■□□□□ 0.18
CAPN1-220ENST00000530567 UFC1Q9Y3C8 167 aa16.19■□□□□ 0.18
CAPN1-220ENST00000530567 FNDC10F2Z333 226 aa16.18■□□□□ 0.18
CAPN1-220ENST00000530567 SCGB2A1O75556 95 aa16.18■□□□□ 0.18
CAPN1-220ENST00000530567 C20orf24Q9BUV8 137 aa16.18■□□□□ 0.18
CAPN1-220ENST00000530567 DAZ1Q9NQZ3 744 aaKnown RBP16.18■□□□□ 0.18
CAPN1-220ENST00000530567 DNAH3Q8TD57 4116 aa16.17■□□□□ 0.18
CAPN1-220ENST00000530567 ZFP92A6NM28 416 aa16.17■□□□□ 0.18
CAPN1-220ENST00000530567 YIF1AO95070 293 aa16.17■□□□□ 0.18
CAPN1-220ENST00000530567 C8orf88P0DMB2 117 aa16.17■□□□□ 0.18
CAPN1-220ENST00000530567 FOLR2P14207 255 aa16.17■□□□□ 0.18
CAPN1-220ENST00000530567 CBLN1P23435 193 aa16.17■□□□□ 0.18
CAPN1-220ENST00000530567 ZNF90Q03938 601 aa16.17■□□□□ 0.18
CAPN1-220ENST00000530567 AKR1C1Q04828 323 aa16.17■□□□□ 0.18
CAPN1-220ENST00000530567 SLC38A11Q08AI6 406 aa16.17■□□□□ 0.18
CAPN1-220ENST00000530567 EGFEM1PQ0D2K5 195 aa16.17■□□□□ 0.18
CAPN1-220ENST00000530567 Q5BKY6 102 aa16.17■□□□□ 0.18
CAPN1-220ENST00000530567 TMEM144Q7Z5S9 345 aa16.17■□□□□ 0.18
CAPN1-220ENST00000530567 TMEM217Q8N7C4 229 aa16.17■□□□□ 0.18
CAPN1-220ENST00000530567 TRGV9Q99603 122 aa16.17■□□□□ 0.18
CAPN1-220ENST00000530567 GGACTQ9BVM4 153 aa16.17■□□□□ 0.18
CAPN1-220ENST00000530567 K7EMT4 169 aa16.16■□□□□ 0.18
CAPN1-220ENST00000530567 ZNF207O43670 478 aaKnown RBP16.16■□□□□ 0.18
CAPN1-220ENST00000530567 SCAF4O95104 1147 aaKnown RBP16.16■□□□□ 0.18
CAPN1-220ENST00000530567 TOMM40O96008 361 aa16.16■□□□□ 0.18
CAPN1-220ENST00000530567 IGLV1-51P01701 117 aa16.16■□□□□ 0.18
CAPN1-220ENST00000530567 RAP2BP61225 183 aa16.16■□□□□ 0.18
CAPN1-220ENST00000530567 EWSR1Q01844 656 aaKnown RBP eCLIP16.16■□□□□ 0.18
CAPN1-220ENST00000530567 STX12Q86Y82 276 aa16.16■□□□□ 0.18
CAPN1-220ENST00000530567 SMCO3A2RU48 225 aa16.15■□□□□ 0.18
CAPN1-220ENST00000530567 PSG1P11464 419 aa16.15■□□□□ 0.18
CAPN1-220ENST00000530567 KRTAP10-11P60412 298 aa16.15■□□□□ 0.18
CAPN1-220ENST00000530567 G3V3Q6 166 aa16.14■□□□□ 0.17
CAPN1-220ENST00000530567 RD3LP0DJH9 198 aa16.14■□□□□ 0.17
CAPN1-220ENST00000530567 NHLH2Q02577 135 aa16.14■□□□□ 0.17
CAPN1-220ENST00000530567 VWC2Q2TAL6 325 aa16.14■□□□□ 0.17
CAPN1-220ENST00000530567 MARC2Q969Z3 335 aa16.14■□□□□ 0.17
CAPN1-220ENST00000530567 SLC25A31Q9H0C2 315 aa16.14■□□□□ 0.17
CAPN1-220ENST00000530567 MLXQ9UH92 298 aa16.14■□□□□ 0.17
CAPN1-220ENST00000530567 FBN3Q75N90 2809 aa16.13■□□□□ 0.17
CAPN1-220ENST00000530567 Q8WTZ3 238 aa16.13■□□□□ 0.17
CAPN1-220ENST00000530567 NPVFQ9HCQ7 196 aa16.13■□□□□ 0.17
CAPN1-220ENST00000530567 MRPL27Q9P0M9 148 aaKnown RBP16.13■□□□□ 0.17
CAPN1-220ENST00000530567 LSM4Q9Y4Z0 139 aaKnown RBP16.13■□□□□ 0.17
CAPN1-220ENST00000530567 S100A11P31949 105 aa16.12■□□□□ 0.17
CAPN1-220ENST00000530567 HBG1P69891 147 aa16.12■□□□□ 0.17
CAPN1-220ENST00000530567 HBG2P69892 147 aa16.12■□□□□ 0.17
CAPN1-220ENST00000530567 BAXQ07812 192 aa16.12■□□□□ 0.17
CAPN1-220ENST00000530567 USF2Q15853 346 aaPredicted RBP16.12■□□□□ 0.17
CAPN1-220ENST00000530567 TMEM182Q6ZP80 229 aaPredicted RBP16.12■□□□□ 0.17
CAPN1-220ENST00000530567 THAP6Q8TBB0 222 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms