RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 SRP14P37108 136 aaKnown RBP2.86□□□□□ -1.95
CAPRIN1-208ENST00000530008 SNCBQ16143 134 aa2.86□□□□□ -1.95
CAPRIN1-208ENST00000530008 SCGB2B2Q4G0G5 96 aa2.86□□□□□ -1.95
CAPRIN1-208ENST00000530008 C9orf163Q8N9P6 203 aa2.86□□□□□ -1.95
CAPRIN1-208ENST00000530008 KRTAP4-4Q9BYR3 166 aa2.86□□□□□ -1.95
CAPRIN1-208ENST00000530008 PBOV1Q9GZY1 135 aa2.86□□□□□ -1.95
CAPRIN1-208ENST00000530008 TMEM106BQ9NUM4 274 aa2.86□□□□□ -1.95
CAPRIN1-208ENST00000530008 SLC35A3Q9Y2D2 325 aa2.86□□□□□ -1.95
CAPRIN1-208ENST00000530008 SYNMO15061 1565 aa2.86□□□□□ -1.95
CAPRIN1-208ENST00000530008 UNC13AQ9UPW8 1703 aa2.85□□□□□ -1.95
CAPRIN1-208ENST00000530008 RIIAD1A6NNX1 92 aa2.85□□□□□ -1.95
CAPRIN1-208ENST00000530008 TAX1BP3O14907 124 aa2.85□□□□□ -1.95
CAPRIN1-208ENST00000530008 CST8O60676 142 aa2.85□□□□□ -1.95
CAPRIN1-208ENST00000530008 KRTAP6-3Q3LI67 103 aa2.85□□□□□ -1.95
CAPRIN1-208ENST00000530008 C7orf65Q6ZTY9 151 aa2.85□□□□□ -1.95
CAPRIN1-208ENST00000530008 SMIM15Q7Z3B0 74 aa2.85□□□□□ -1.95
CAPRIN1-208ENST00000530008 DUXBA0A1W2PPF3 345 aa2.84□□□□□ -1.95
CAPRIN1-208ENST00000530008 GPR31O00270 319 aa2.84□□□□□ -1.95
CAPRIN1-208ENST00000530008 CTSDP07339 412 aaPredicted RBP2.84□□□□□ -1.95
CAPRIN1-208ENST00000530008 RNASE4P34096 147 aaKnown RBP2.84□□□□□ -1.95
CAPRIN1-208ENST00000530008 GLRXP35754 106 aa2.84□□□□□ -1.95
CAPRIN1-208ENST00000530008 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.84□□□□□ -1.95
CAPRIN1-208ENST00000530008 MALSU1Q96EH3 234 aa2.84□□□□□ -1.95
CAPRIN1-208ENST00000530008 MIXL1Q9H2W2 232 aa2.84□□□□□ -1.95
CAPRIN1-208ENST00000530008 LHFPL6Q9Y693 200 aa2.84□□□□□ -1.95
CAPRIN1-208ENST00000530008 SCN10AQ9Y5Y9 1956 aa2.83□□□□□ -1.96
CAPRIN1-208ENST00000530008 MED1Q15648 1581 aaPredicted RBP2.83□□□□□ -1.96
CAPRIN1-208ENST00000530008 APOA2P02652 100 aa2.83□□□□□ -1.96
CAPRIN1-208ENST00000530008 FKBP2P26885 142 aaKnown RBP2.83□□□□□ -1.96
CAPRIN1-208ENST00000530008 OR13D1Q8NGV5 346 aa2.83□□□□□ -1.96
CAPRIN1-208ENST00000530008 AQP3Q92482 292 aa2.83□□□□□ -1.96
CAPRIN1-208ENST00000530008 CST9LQ9H4G1 147 aa2.83□□□□□ -1.96
CAPRIN1-208ENST00000530008 PCTPQ9UKL6 214 aa2.83□□□□□ -1.96
CAPRIN1-208ENST00000530008 TONSLQ96HA7 1378 aa2.83□□□□□ -1.96
CAPRIN1-208ENST00000530008 DOCK3Q8IZD9 2030 aa2.83□□□□□ -1.96
CAPRIN1-208ENST00000530008 IGKV1D-42A0A075B6H8 117 aa2.82□□□□□ -1.96
CAPRIN1-208ENST00000530008 C7orf71A4D174 169 aa2.82□□□□□ -1.96
CAPRIN1-208ENST00000530008 M0R378 163 aa2.82□□□□□ -1.96
CAPRIN1-208ENST00000530008 CRHP06850 196 aa2.82□□□□□ -1.96
CAPRIN1-208ENST00000530008 BCL2L15Q5TBC7 163 aa2.82□□□□□ -1.96
CAPRIN1-208ENST00000530008 ZNF826PQ6ZT77 177 aa2.82□□□□□ -1.96
CAPRIN1-208ENST00000530008 OR10J5Q8NHC4 309 aa2.82□□□□□ -1.96
CAPRIN1-208ENST00000530008 YIPF3Q9GZM5 350 aa2.82□□□□□ -1.96
CAPRIN1-208ENST00000530008 MALRD1Q5VYJ5 2156 aa2.82□□□□□ -1.96
CAPRIN1-208ENST00000530008 KIF1BO60333 1816 aa2.82□□□□□ -1.96
CAPRIN1-208ENST00000530008 IFNA21P01568 189 aa2.81□□□□□ -1.96
CAPRIN1-208ENST00000530008 CSN2P05814 226 aa2.81□□□□□ -1.96
CAPRIN1-208ENST00000530008 PSMD8P48556 350 aa2.81□□□□□ -1.96
CAPRIN1-208ENST00000530008 FAM24BQ8N5W8 94 aa2.81□□□□□ -1.96
CAPRIN1-208ENST00000530008 OR4D11Q8NGI4 311 aa2.81□□□□□ -1.96
CAPRIN1-208ENST00000530008 YPEL2Q96QA6 119 aa2.81□□□□□ -1.96
CAPRIN1-208ENST00000530008 OR2J1Q9GZK6 312 aa2.81□□□□□ -1.96
CAPRIN1-208ENST00000530008 YTHDC2Q9H6S0 1430 aaKnown RBP2.81□□□□□ -1.96
CAPRIN1-208ENST00000530008 SMARCA4P51532 1647 aa2.81□□□□□ -1.96
CAPRIN1-208ENST00000530008 GREB1Q4ZG55 1949 aa2.8□□□□□ -1.96
CAPRIN1-208ENST00000530008 PBRM1Q86U86 1689 aa2.8□□□□□ -1.96
CAPRIN1-208ENST00000530008 UBBP0CG47 229 aa2.8□□□□□ -1.96
CAPRIN1-208ENST00000530008 NFYBP25208 207 aa2.8□□□□□ -1.96
CAPRIN1-208ENST00000530008 DEFB103AP81534 67 aa2.8□□□□□ -1.96
CAPRIN1-208ENST00000530008 TFAMQ00059 246 aaKnown RBP2.8□□□□□ -1.96
CAPRIN1-208ENST00000530008 DCUN1D2Q6PH85 259 aa2.8□□□□□ -1.96
CAPRIN1-208ENST00000530008 CANT1Q8WVQ1 401 aa2.8□□□□□ -1.96
CAPRIN1-208ENST00000530008 PLEKHB2Q96CS7 222 aa2.8□□□□□ -1.96
CAPRIN1-208ENST00000530008 DDA1Q9BW61 102 aa2.8□□□□□ -1.96
CAPRIN1-208ENST00000530008 TMEM126AQ9H061 195 aa2.8□□□□□ -1.96
CAPRIN1-208ENST00000530008 DISP1Q96F81 1524 aa2.79□□□□□ -1.96
CAPRIN1-208ENST00000530008 UHRF1BP1Q6BDS2 1440 aa2.79□□□□□ -1.96
CAPRIN1-208ENST00000530008 MEIKINA0A087WXM9 373 aa2.79□□□□□ -1.96
CAPRIN1-208ENST00000530008 MAP1LC3B2A6NCE7 125 aa2.79□□□□□ -1.96
CAPRIN1-208ENST00000530008 GGCTO75223 188 aaKnown RBP2.79□□□□□ -1.96
CAPRIN1-208ENST00000530008 UBE2BP63146 152 aa2.79□□□□□ -1.96
CAPRIN1-208ENST00000530008 LTC4SQ16873 150 aa2.79□□□□□ -1.96
CAPRIN1-208ENST00000530008 TMEM78Q5T7P6 136 aa2.79□□□□□ -1.96
CAPRIN1-208ENST00000530008 C22orf39Q6P5X5 142 aa2.79□□□□□ -1.96
CAPRIN1-208ENST00000530008 NUP35Q8NFH5 326 aa2.79□□□□□ -1.96
CAPRIN1-208ENST00000530008 PRADC1Q9BSG0 188 aa2.79□□□□□ -1.96
CAPRIN1-208ENST00000530008 MAP1LC3BQ9GZQ8 125 aa2.79□□□□□ -1.96
CAPRIN1-208ENST00000530008 NHP2Q9NX24 153 aaKnown RBP2.79□□□□□ -1.96
CAPRIN1-208ENST00000530008 CPAMD8Q8IZJ3 1885 aa2.79□□□□□ -1.96
CAPRIN1-208ENST00000530008 ZNF106Q9H2Y7 1883 aaKnown RBP2.79□□□□□ -1.96
CAPRIN1-208ENST00000530008 TRGV10A0A0A0MS01 117 aa2.78□□□□□ -1.96
CAPRIN1-208ENST00000530008 TMEM256-PLSCR3K7ERE1 68 aa2.78□□□□□ -1.96
CAPRIN1-208ENST00000530008 PIAS1O75925 651 aa2.78□□□□□ -1.96
CAPRIN1-208ENST00000530008 OGNP20774 298 aaKnown RBP2.78□□□□□ -1.96
CAPRIN1-208ENST00000530008 ELOBQ15370 118 aa2.78□□□□□ -1.96
CAPRIN1-208ENST00000530008 Q1T7F1 81 aa2.78□□□□□ -1.96
CAPRIN1-208ENST00000530008 SPANXN5Q5MJ07 72 aa2.78□□□□□ -1.96
CAPRIN1-208ENST00000530008 AKAP14Q86UN6 197 aa2.78□□□□□ -1.96
CAPRIN1-208ENST00000530008 LINC00471Q8N535 108 aa2.78□□□□□ -1.96
CAPRIN1-208ENST00000530008 OR10K1Q8NGX5 313 aa2.78□□□□□ -1.96
CAPRIN1-208ENST00000530008 OR2T10Q8NGZ9 312 aa2.78□□□□□ -1.96
CAPRIN1-208ENST00000530008 MBD3L1Q8WWY6 194 aa2.78□□□□□ -1.96
CAPRIN1-208ENST00000530008 MRPL32Q9BYC8 188 aaKnown RBP2.78□□□□□ -1.96
CAPRIN1-208ENST00000530008 TAS2R4Q9NYW5 299 aa2.78□□□□□ -1.96
CAPRIN1-208ENST00000530008 MYO9BQ13459 2157 aa2.78□□□□□ -1.96
CAPRIN1-208ENST00000530008 GNG14A0A1W2PPG7 69 aa2.77□□□□□ -1.97
CAPRIN1-208ENST00000530008 GPX2P18283 190 aa2.77□□□□□ -1.97
CAPRIN1-208ENST00000530008 INSL3P51460 131 aa2.77□□□□□ -1.97
CAPRIN1-208ENST00000530008 BRMS1LQ5PSV4 323 aa2.77□□□□□ -1.97
CAPRIN1-208ENST00000530008 TAC4Q86UU9 113 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms