RNA–Protein interactions for RNA: ENST00000529757.5

PACS1-209, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PACS1, Length 1,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-209ENST00000529757 IGLC1P0CG04 106 aa13□□□□□ -0.33
PACS1-209ENST00000529757 GATA2P23769 480 aaPredicted RBP13□□□□□ -0.33
PACS1-209ENST00000529757 NPBWR1P48145 328 aa13□□□□□ -0.33
PACS1-209ENST00000529757 NECAP1Q8NC96 275 aa13□□□□□ -0.33
PACS1-209ENST00000529757 VN1R17PQ8TDU5 208 aa13□□□□□ -0.33
PACS1-209ENST00000529757 MBD3L1Q8WWY6 194 aa13□□□□□ -0.33
PACS1-209ENST00000529757 PRSS22Q9GZN4 317 aa13□□□□□ -0.33
PACS1-209ENST00000529757 SLC25A22Q9H936 323 aa13□□□□□ -0.33
PACS1-209ENST00000529757 C21orf62Q9NYP8 219 aa13□□□□□ -0.33
PACS1-209ENST00000529757 TRAV1-1A0A0B4J248 108 aa12.99□□□□□ -0.33
PACS1-209ENST00000529757 A0A1B0GV50 99 aa12.99□□□□□ -0.33
PACS1-209ENST00000529757 SEC14L6B5MCN3 397 aa12.99□□□□□ -0.33
PACS1-209ENST00000529757 CDC34P49427 236 aaPredicted RBP12.99□□□□□ -0.33
PACS1-209ENST00000529757 DEFA5Q01523 94 aa12.99□□□□□ -0.33
PACS1-209ENST00000529757 SPSB3Q6PJ21 355 aa12.99□□□□□ -0.33
PACS1-209ENST00000529757 LCN15Q6UWW0 184 aa12.99□□□□□ -0.33
PACS1-209ENST00000529757 SSX7Q7RTT5 188 aa12.99□□□□□ -0.33
PACS1-209ENST00000529757 COMMD1Q8N668 190 aa12.99□□□□□ -0.33
PACS1-209ENST00000529757 DUX5Q96PT3 197 aa12.99□□□□□ -0.33
PACS1-209ENST00000529757 GSX1Q9H4S2 264 aaPredicted RBP12.99□□□□□ -0.33
PACS1-209ENST00000529757 S4R3C0 116 aa12.99□□□□□ -0.33
PACS1-209ENST00000529757 A0A1W2PPV4 95 aa12.99□□□□□ -0.33
PACS1-209ENST00000529757 RAB19A4D1S5 217 aa12.99□□□□□ -0.33
PACS1-209ENST00000529757 MAP1LC3B2A6NCE7 125 aa12.99□□□□□ -0.33
PACS1-209ENST00000529757 H3BUA1 57 aa12.99□□□□□ -0.33
PACS1-209ENST00000529757 CD99P14209 185 aa12.99□□□□□ -0.33
PACS1-209ENST00000529757 FOSL1P15407 271 aa12.99□□□□□ -0.33
PACS1-209ENST00000529757 PPIFP30405 207 aaKnown RBP12.99□□□□□ -0.33
PACS1-209ENST00000529757 C15orf32Q32M92 178 aa12.99□□□□□ -0.33
PACS1-209ENST00000529757 RAB24Q969Q5 203 aa12.99□□□□□ -0.33
PACS1-209ENST00000529757 MS4A10Q96PG2 267 aa12.99□□□□□ -0.33
PACS1-209ENST00000529757 MAP1LC3BQ9GZQ8 125 aa12.99□□□□□ -0.33
PACS1-209ENST00000529757 TRAV30A0A087WSZ9 112 aa12.98□□□□□ -0.33
PACS1-209ENST00000529757 GNG7O60262 68 aa12.98□□□□□ -0.33
PACS1-209ENST00000529757 BRI3O95415 125 aa12.98□□□□□ -0.33
PACS1-209ENST00000529757 FABP1P07148 127 aa12.98□□□□□ -0.33
PACS1-209ENST00000529757 SRD5A1P18405 259 aa12.98□□□□□ -0.33
PACS1-209ENST00000529757 Q56UQ5 140 aa12.98□□□□□ -0.33
PACS1-209ENST00000529757 EIF4E3Q8N5X7 224 aaKnown RBP12.98□□□□□ -0.33
PACS1-209ENST00000529757 TXN2Q99757 166 aa12.98□□□□□ -0.33
PACS1-209ENST00000529757 CDC42EP3Q9UKI2 254 aa12.98□□□□□ -0.33
PACS1-209ENST00000529757 SONP18583 2426 aaKnown RBP12.98□□□□□ -0.33
PACS1-209ENST00000529757 DNAJC9-AS1A6NH13 148 aa12.97□□□□□ -0.33
PACS1-209ENST00000529757 FAM223BA6NKX1 122 aa12.97□□□□□ -0.33
PACS1-209ENST00000529757 FCGR2BP31994 310 aaPredicted RBP12.97□□□□□ -0.33
PACS1-209ENST00000529757 RHOBP62745 196 aa12.97□□□□□ -0.33
PACS1-209ENST00000529757 TMEM95Q3KNT9 176 aa12.97□□□□□ -0.33
PACS1-209ENST00000529757 TIGITQ495A1 244 aa12.97□□□□□ -0.33
PACS1-209ENST00000529757 FAM223AQ8IWN6 122 aa12.97□□□□□ -0.33
PACS1-209ENST00000529757 C19orf24Q9BVV8 132 aa12.97□□□□□ -0.33
PACS1-209ENST00000529757 ZNF702PQ9H963 129 aa12.97□□□□□ -0.33
PACS1-209ENST00000529757 F8W735 103 aaPredicted RBP12.96□□□□□ -0.33
PACS1-209ENST00000529757 SCGB2A1O75556 95 aa12.96□□□□□ -0.33
PACS1-209ENST00000529757 EIF3GO75821 320 aaKnown RBP eCLIP12.96□□□□□ -0.33
PACS1-209ENST00000529757 IGKV1-17P01599 117 aa12.96□□□□□ -0.33
PACS1-209ENST00000529757 IGHV3-23P01764 117 aa12.96□□□□□ -0.33
PACS1-209ENST00000529757 TRGV3P03979 118 aa12.96□□□□□ -0.33
PACS1-209ENST00000529757 CCL20P78556 96 aa12.96□□□□□ -0.33
PACS1-209ENST00000529757 CFHR3Q02985 330 aa12.96□□□□□ -0.33
PACS1-209ENST00000529757 OR1L4Q8NGR5 311 aa12.96□□□□□ -0.33
PACS1-209ENST00000529757 ZNF502Q8TBZ5 544 aa12.96□□□□□ -0.33
PACS1-209ENST00000529757 HMGB3O15347 200 aaKnown RBP12.96□□□□□ -0.34
PACS1-209ENST00000529757 COX7A2P2O60397 106 aa12.96□□□□□ -0.34
PACS1-209ENST00000529757 FGF8P55075 233 aaPredicted RBP12.96□□□□□ -0.34
PACS1-209ENST00000529757 ATP5G2Q06055 141 aa12.96□□□□□ -0.34
PACS1-209ENST00000529757 GATAD1Q8WUU5 269 aa12.96□□□□□ -0.34
PACS1-209ENST00000529757 EEF1AKMT3Q96AZ1 226 aa12.96□□□□□ -0.34
PACS1-209ENST00000529757 PFDN5Q99471 154 aa12.96□□□□□ -0.34
PACS1-209ENST00000529757 PSMB11A5LHX3 300 aa12.95□□□□□ -0.34
PACS1-209ENST00000529757 IGLV1-40P01703 118 aa12.95□□□□□ -0.34
PACS1-209ENST00000529757 RD3LP0DJH9 198 aa12.95□□□□□ -0.34
PACS1-209ENST00000529757 PSG1P11464 419 aa12.95□□□□□ -0.34
PACS1-209ENST00000529757 TPPP2P59282 170 aa12.95□□□□□ -0.34
PACS1-209ENST00000529757 FAM78BQ5VT40 261 aa12.95□□□□□ -0.34
PACS1-209ENST00000529757 UQCC3Q6UW78 93 aa12.95□□□□□ -0.34
PACS1-209ENST00000529757 FAM210AQ96ND0 272 aa12.95□□□□□ -0.34
PACS1-209ENST00000529757 RNF2Q99496 336 aa12.95□□□□□ -0.34
PACS1-209ENST00000529757 SEPSECSQ9HD40 501 aaKnown RBP12.95□□□□□ -0.34
PACS1-209ENST00000529757 DNAJC4Q9NNZ3 241 aa12.95□□□□□ -0.34
PACS1-209ENST00000529757 GAR1Q9NY12 217 aaKnown RBP12.95□□□□□ -0.34
PACS1-209ENST00000529757 FLNBO75369 2602 aaKnown RBP12.95□□□□□ -0.34
PACS1-209ENST00000529757 TRBV7-1A0A0A6YYK4 115 aa12.94□□□□□ -0.34
PACS1-209ENST00000529757 OR2T8A6NH00 312 aa12.94□□□□□ -0.34
PACS1-209ENST00000529757 CLDN34H7C241 214 aa12.94□□□□□ -0.34
PACS1-209ENST00000529757 TOMM40O96008 361 aa12.94□□□□□ -0.34
PACS1-209ENST00000529757 OR5G3P0C626 314 aa12.94□□□□□ -0.34
PACS1-209ENST00000529757 PF4V1P10720 104 aa12.94□□□□□ -0.34
PACS1-209ENST00000529757 S100A1P23297 94 aa12.94□□□□□ -0.34
PACS1-209ENST00000529757 YPEL3P61236 119 aaPredicted RBP12.94□□□□□ -0.34
PACS1-209ENST00000529757 Q8N2B8 174 aa12.94□□□□□ -0.34
PACS1-209ENST00000529757 ZNF418Q8TF45 676 aaPredicted RBP12.94□□□□□ -0.34
PACS1-209ENST00000529757 TMEM37Q8WXS4 190 aa12.94□□□□□ -0.34
PACS1-209ENST00000529757 PBDC1Q9BVG4 233 aa12.94□□□□□ -0.34
PACS1-209ENST00000529757 ESM1Q9NQ30 184 aa12.94□□□□□ -0.34
PACS1-209ENST00000529757 DOK5Q9P104 306 aa12.94□□□□□ -0.34
PACS1-209ENST00000529757 FUT9Q9Y231 359 aa12.94□□□□□ -0.34
PACS1-209ENST00000529757 ELOA3CA0A087WX78 387 aaPredicted RBP12.93□□□□□ -0.34
PACS1-209ENST00000529757 PLP1P60201 277 aa12.93□□□□□ -0.34
PACS1-209ENST00000529757 GUK1Q16774 197 aa12.93□□□□□ -0.34
PACS1-209ENST00000529757 C10orf113Q5VZT2 155 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms