RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 BCL2P10415 239 aa2.2□□□□□ -2.06
C11orf88-204ENST00000529661 RPL7P18124 248 aaKnown RBP2.2□□□□□ -2.06
C11orf88-204ENST00000529661 PSMB8P28062 276 aa2.2□□□□□ -2.06
C11orf88-204ENST00000529661 HLA-DMBP28068 263 aa2.2□□□□□ -2.06
C11orf88-204ENST00000529661 CA5AP35218 305 aa2.2□□□□□ -2.06
C11orf88-204ENST00000529661 OR8B8Q15620 311 aa2.2□□□□□ -2.06
C11orf88-204ENST00000529661 FAM229BQ4G0N7 80 aa2.2□□□□□ -2.06
C11orf88-204ENST00000529661 FKBP1CQ5VVH2 108 aa2.2□□□□□ -2.06
C11orf88-204ENST00000529661 C2orf91Q6ZV80 131 aa2.2□□□□□ -2.06
C11orf88-204ENST00000529661 TRAPPC6BQ86SZ2 158 aa2.2□□□□□ -2.06
C11orf88-204ENST00000529661 LYPD6Q86Y78 171 aa2.2□□□□□ -2.06
C11orf88-204ENST00000529661 DYNAPQ8N1N2 210 aa2.2□□□□□ -2.06
C11orf88-204ENST00000529661 TERB2Q8NHR7 220 aa2.2□□□□□ -2.06
C11orf88-204ENST00000529661 TEX37Q96LM6 180 aa2.2□□□□□ -2.06
C11orf88-204ENST00000529661 TSC22D3Q99576 134 aa2.2□□□□□ -2.06
C11orf88-204ENST00000529661 OR8D2Q9GZM6 311 aa2.2□□□□□ -2.06
C11orf88-204ENST00000529661 CKLFQ9UBR5 152 aa2.2□□□□□ -2.06
C11orf88-204ENST00000529661 PAIP2BQ9ULR5 123 aaKnown RBP2.2□□□□□ -2.06
C11orf88-204ENST00000529661 PIK3C2AO00443 1686 aa2.2□□□□□ -2.06
C11orf88-204ENST00000529661 NUP98P52948 1817 aa2.19□□□□□ -2.06
C11orf88-204ENST00000529661 ARHGAP32A7KAX9 2087 aa2.19□□□□□ -2.06
C11orf88-204ENST00000529661 N4BP2Q86UW6 1770 aaPredicted RBP2.19□□□□□ -2.06
C11orf88-204ENST00000529661 A0A087X0T9 212 aa2.19□□□□□ -2.06
C11orf88-204ENST00000529661 IGKV3D-11A0A0A0MRZ8 115 aa2.19□□□□□ -2.06
C11orf88-204ENST00000529661 A0A0D9SEW6 157 aa2.19□□□□□ -2.06
C11orf88-204ENST00000529661 A0A0J9YW62 118 aa2.19□□□□□ -2.06
C11orf88-204ENST00000529661 TRDV1A0A1B0GX56 115 aa2.19□□□□□ -2.06
C11orf88-204ENST00000529661 ARRDC5A6NEK1 342 aa2.19□□□□□ -2.06
C11orf88-204ENST00000529661 TMEM212A6NML5 194 aa2.19□□□□□ -2.06
C11orf88-204ENST00000529661 H3BPC8 53 aa2.19□□□□□ -2.06
C11orf88-204ENST00000529661 TXNDC9O14530 226 aa2.19□□□□□ -2.06
C11orf88-204ENST00000529661 NDUFA2O43678 99 aa2.19□□□□□ -2.06
C11orf88-204ENST00000529661 GGCTO75223 188 aaKnown RBP2.19□□□□□ -2.06
C11orf88-204ENST00000529661 SOD1P00441 154 aa2.19□□□□□ -2.06
C11orf88-204ENST00000529661 TRGC2P03986 189 aa2.19□□□□□ -2.06
C11orf88-204ENST00000529661 BPGMP07738 259 aa2.19□□□□□ -2.06
C11orf88-204ENST00000529661 MSMBP08118 114 aa2.19□□□□□ -2.06
C11orf88-204ENST00000529661 GZMBP10144 247 aa2.19□□□□□ -2.06
C11orf88-204ENST00000529661 CKS1BP61024 79 aa2.19□□□□□ -2.06
C11orf88-204ENST00000529661 PLCXD2Q0VAA5 305 aa2.19□□□□□ -2.06
C11orf88-204ENST00000529661 NOXRED1Q6NXP6 359 aa2.19□□□□□ -2.06
C11orf88-204ENST00000529661 BRD3OSQ6XYD6 125 aa2.19□□□□□ -2.06
C11orf88-204ENST00000529661 ZNF705AQ6ZN79 300 aaPredicted RBP2.19□□□□□ -2.06
C11orf88-204ENST00000529661 CROCCP2Q86T23 111 aa2.19□□□□□ -2.06
C11orf88-204ENST00000529661 LHFPL1Q86WI0 220 aa2.19□□□□□ -2.06
C11orf88-204ENST00000529661 PRR15Q8IV56 129 aa2.19□□□□□ -2.06
C11orf88-204ENST00000529661 OR8J3Q8NGG0 315 aa2.19□□□□□ -2.06
C11orf88-204ENST00000529661 MED31Q9Y3C7 131 aa2.19□□□□□ -2.06
C11orf88-204ENST00000529661 FAM215AQ9Y5M1 114 aa2.19□□□□□ -2.06
C11orf88-204ENST00000529661 CACNA1DQ01668 2161 aa2.19□□□□□ -2.06
C11orf88-204ENST00000529661 MED1Q15648 1581 aaPredicted RBP2.19□□□□□ -2.06
C11orf88-204ENST00000529661 A0A1W2PQD3 144 aa2.18□□□□□ -2.06
C11orf88-204ENST00000529661 TMEM189A5PLL7 270 aa2.18□□□□□ -2.06
C11orf88-204ENST00000529661 M0R378 163 aa2.18□□□□□ -2.06
C11orf88-204ENST00000529661 OVOL1O14753 267 aa2.18□□□□□ -2.06
C11orf88-204ENST00000529661 UCHL1P09936 223 aa2.18□□□□□ -2.06
C11orf88-204ENST00000529661 NFYBP25208 207 aa2.18□□□□□ -2.06
C11orf88-204ENST00000529661 RTL8BQ17RB0 113 aa2.18□□□□□ -2.06
C11orf88-204ENST00000529661 MORN2Q502X0 79 aa2.18□□□□□ -2.06
C11orf88-204ENST00000529661 BCL2L15Q5TBC7 163 aa2.18□□□□□ -2.06
C11orf88-204ENST00000529661 C1orf140Q5VVS0 124 aa2.18□□□□□ -2.06
C11orf88-204ENST00000529661 HCP5Q6MZN7 132 aa2.18□□□□□ -2.06
C11orf88-204ENST00000529661 ZNF767PQ75MW2 155 aa2.18□□□□□ -2.06
C11orf88-204ENST00000529661 MIR17HGQ75NE6 70 aa2.18□□□□□ -2.06
C11orf88-204ENST00000529661 RPP25LQ8N5L8 163 aaKnown RBP2.18□□□□□ -2.06
C11orf88-204ENST00000529661 DCANP1Q8TF63 244 aa2.18□□□□□ -2.06
C11orf88-204ENST00000529661 CARD19Q96LW7 228 aa2.18□□□□□ -2.06
C11orf88-204ENST00000529661 YPEL2Q96QA6 119 aa2.18□□□□□ -2.06
C11orf88-204ENST00000529661 TPT1P8Q9HAU6 139 aa2.18□□□□□ -2.06
C11orf88-204ENST00000529661 TXNL4BQ9NX01 149 aaKnown RBP2.18□□□□□ -2.06
C11orf88-204ENST00000529661 RBM7Q9Y580 266 aaKnown RBP2.18□□□□□ -2.06
C11orf88-204ENST00000529661 MED23Q9ULK4 1368 aa2.18□□□□□ -2.06
C11orf88-204ENST00000529661 WDR7Q9Y4E6 1490 aa2.18□□□□□ -2.06
C11orf88-204ENST00000529661 BICRAQ9NZM4 1560 aa2.18□□□□□ -2.06
C11orf88-204ENST00000529661 PTPRBP23467 1997 aa2.18□□□□□ -2.06
C11orf88-204ENST00000529661 ARHGEF28Q8N1W1 1705 aaKnown RBP2.17□□□□□ -2.06
C11orf88-204ENST00000529661 IGLV10-54A0A075B6I4 117 aa2.17□□□□□ -2.06
C11orf88-204ENST00000529661 IGKV1-9A0A0C4DH69 117 aa2.17□□□□□ -2.06
C11orf88-204ENST00000529661 A0A1W2PNM2 257 aa2.17□□□□□ -2.06
C11orf88-204ENST00000529661 MEIS3P1A6NDR6 274 aa2.17□□□□□ -2.06
C11orf88-204ENST00000529661 H7BYZ3 331 aa2.17□□□□□ -2.06
C11orf88-204ENST00000529661 CREBL2O60519 120 aaPredicted RBP2.17□□□□□ -2.06
C11orf88-204ENST00000529661 CST8O60676 142 aa2.17□□□□□ -2.06
C11orf88-204ENST00000529661 ZNF728P0DKX0 622 aa2.17□□□□□ -2.06
C11orf88-204ENST00000529661 ZNF22P17026 224 aaPredicted RBP2.17□□□□□ -2.06
C11orf88-204ENST00000529661 LGALS3P17931 250 aaKnown RBP2.17□□□□□ -2.06
C11orf88-204ENST00000529661 S100A11P31949 105 aa2.17□□□□□ -2.06
C11orf88-204ENST00000529661 SRP14P37108 136 aaKnown RBP2.17□□□□□ -2.06
C11orf88-204ENST00000529661 EVX1P49640 407 aa2.17□□□□□ -2.06
C11orf88-204ENST00000529661 INSL3P51460 131 aa2.17□□□□□ -2.06
C11orf88-204ENST00000529661 EIF5AP63241 154 aaKnown RBP2.17□□□□□ -2.06
C11orf88-204ENST00000529661 EIF3IQ13347 325 aaKnown RBP2.17□□□□□ -2.06
C11orf88-204ENST00000529661 HIST3H2BBQ8N257 126 aa2.17□□□□□ -2.06
C11orf88-204ENST00000529661 TMEM229BQ8NBD8 167 aa2.17□□□□□ -2.06
C11orf88-204ENST00000529661 OR52R1Q8NGF1 315 aa2.17□□□□□ -2.06
C11orf88-204ENST00000529661 OR8D4Q8NGM9 314 aa2.17□□□□□ -2.06
C11orf88-204ENST00000529661 BORCS8Q96FH0 119 aa2.17□□□□□ -2.06
C11orf88-204ENST00000529661 SCGB3A1Q96QR1 104 aa2.17□□□□□ -2.06
C11orf88-204ENST00000529661 PFDN5Q99471 154 aa2.17□□□□□ -2.06
C11orf88-204ENST00000529661 SLC25A21Q9BQT8 299 aaPredicted RBP2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms