RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 TRAV14DV4A0A0A6YYC5 116 aa12.08□□□□□ -0.48
TSPAN4-218ENST00000529566 PRSS46E5RG02 174 aa12.08□□□□□ -0.48
TSPAN4-218ENST00000529566 WRBO00258 174 aa12.08□□□□□ -0.48
TSPAN4-218ENST00000529566 IFNA4P05014 189 aa12.08□□□□□ -0.48
TSPAN4-218ENST00000529566 OR10J1P30954 320 aa12.08□□□□□ -0.48
TSPAN4-218ENST00000529566 CD81P60033 236 aa12.08□□□□□ -0.48
TSPAN4-218ENST00000529566 POLR2GP62487 172 aaKnown RBP eCLIP12.08□□□□□ -0.48
TSPAN4-218ENST00000529566 SLC16A13Q7RTY0 426 aa12.08□□□□□ -0.48
TSPAN4-218ENST00000529566 SBSPONQ8IVN8 264 aa12.08□□□□□ -0.48
TSPAN4-218ENST00000529566 OR1S2Q8NGQ3 325 aa12.08□□□□□ -0.48
TSPAN4-218ENST00000529566 CIB3Q96Q77 187 aaPredicted RBP12.08□□□□□ -0.48
TSPAN4-218ENST00000529566 RNF2Q99496 336 aa12.08□□□□□ -0.48
TSPAN4-218ENST00000529566 ASCL2Q99929 193 aa12.08□□□□□ -0.48
TSPAN4-218ENST00000529566 NEURL2Q9BR09 285 aa12.08□□□□□ -0.48
TSPAN4-218ENST00000529566 RHPN1-AS1Q9BWJ2 59 aa12.08□□□□□ -0.48
TSPAN4-218ENST00000529566 IGHV3-49A0A0A0MS15 119 aa12.07□□□□□ -0.48
TSPAN4-218ENST00000529566 TSPAN4O14817 238 aa12.07□□□□□ -0.48
TSPAN4-218ENST00000529566 APOHP02749 345 aaPredicted RBP12.07□□□□□ -0.48
TSPAN4-218ENST00000529566 NHLRC4P0CG21 123 aaPredicted RBP12.07□□□□□ -0.48
TSPAN4-218ENST00000529566 NKX2-1P43699 371 aaPredicted RBP12.07□□□□□ -0.48
TSPAN4-218ENST00000529566 YPEL3P61236 119 aaPredicted RBP12.07□□□□□ -0.48
TSPAN4-218ENST00000529566 GAMTQ14353 236 aa12.07□□□□□ -0.48
TSPAN4-218ENST00000529566 IAH1Q2TAA2 248 aaPredicted RBP12.07□□□□□ -0.48
TSPAN4-218ENST00000529566 FAM90A2PQ658T7 463 aa12.07□□□□□ -0.48
TSPAN4-218ENST00000529566 RBPMS2Q6ZRY4 209 aaKnown RBP12.07□□□□□ -0.48
TSPAN4-218ENST00000529566 NRARPQ7Z6K4 114 aa12.07□□□□□ -0.48
TSPAN4-218ENST00000529566 LILRB2Q8N423 598 aa12.07□□□□□ -0.48
TSPAN4-218ENST00000529566 ZBTB8BQ8NAP8 495 aaPredicted RBP12.07□□□□□ -0.48
TSPAN4-218ENST00000529566 ACY3Q96HD9 319 aa12.07□□□□□ -0.48
TSPAN4-218ENST00000529566 VSIRQ9H7M9 311 aa12.07□□□□□ -0.48
TSPAN4-218ENST00000529566 IGKV1D-37A0A075B6S9 117 aa12.06□□□□□ -0.48
TSPAN4-218ENST00000529566 IGHV3OR16-13A0A075B7E8 117 aa12.06□□□□□ -0.48
TSPAN4-218ENST00000529566 IGHV3-74A0A0B4J1X5 117 aa12.06□□□□□ -0.48
TSPAN4-218ENST00000529566 IL5P05113 134 aa12.06□□□□□ -0.48
TSPAN4-218ENST00000529566 PAX9P55771 341 aa12.06□□□□□ -0.48
TSPAN4-218ENST00000529566 LINC00322Q6ZN03 302 aaPredicted RBP12.06□□□□□ -0.48
TSPAN4-218ENST00000529566 C12orf45Q8N5I9 185 aaPredicted RBP12.06□□□□□ -0.48
TSPAN4-218ENST00000529566 GINS3Q9BRX5 216 aa12.06□□□□□ -0.48
TSPAN4-218ENST00000529566 CCSO14618 274 aa12.05□□□□□ -0.48
TSPAN4-218ENST00000529566 CRYBB3P26998 211 aa12.05□□□□□ -0.48
TSPAN4-218ENST00000529566 RAB11AP62491 216 aa12.05□□□□□ -0.48
TSPAN4-218ENST00000529566 LAMTOR1Q6IAA8 161 aa12.05□□□□□ -0.48
TSPAN4-218ENST00000529566 DEFB125Q8N687 156 aa12.05□□□□□ -0.48
TSPAN4-218ENST00000529566 ENKURQ8TC29 256 aa12.05□□□□□ -0.48
TSPAN4-218ENST00000529566 ST8SIA2Q92186 375 aa12.05□□□□□ -0.48
TSPAN4-218ENST00000529566 SMIM8Q96KF7 97 aa12.05□□□□□ -0.48
TSPAN4-218ENST00000529566 SPAG8Q99932 426 aaPredicted RBP12.05□□□□□ -0.48
TSPAN4-218ENST00000529566 WFDC10AQ9H1F0 79 aa12.05□□□□□ -0.48
TSPAN4-218ENST00000529566 SCGB2A1O75556 95 aa12.04□□□□□ -0.48
TSPAN4-218ENST00000529566 MBPP02686 304 aaPredicted RBP12.04□□□□□ -0.48
TSPAN4-218ENST00000529566 RPP30P78346 268 aaKnown RBP12.04□□□□□ -0.48
TSPAN4-218ENST00000529566 SPANXN5Q5MJ07 72 aa12.04□□□□□ -0.48
TSPAN4-218ENST00000529566 GSKIPQ9P0R6 139 aa12.04□□□□□ -0.48
TSPAN4-218ENST00000529566 RCL1Q9Y2P8 373 aaKnown RBP12.04□□□□□ -0.48
TSPAN4-218ENST00000529566 U3KQE9 123 aa12.04□□□□□ -0.48
TSPAN4-218ENST00000529566 IGKV1OR2-108A0A075B7D4 117 aa12.03□□□□□ -0.48
TSPAN4-218ENST00000529566 PMS2P5A8MQ11 134 aa12.03□□□□□ -0.48
TSPAN4-218ENST00000529566 OR11H12B2RN74 326 aa12.03□□□□□ -0.48
TSPAN4-218ENST00000529566 H3BP45 60 aa12.03□□□□□ -0.48
TSPAN4-218ENST00000529566 SSSCA1O60232 199 aa12.03□□□□□ -0.48
TSPAN4-218ENST00000529566 TOMM40O96008 361 aa12.03□□□□□ -0.48
TSPAN4-218ENST00000529566 NPPCP23582 126 aa12.03□□□□□ -0.48
TSPAN4-218ENST00000529566 IL15RAQ13261 267 aa12.03□□□□□ -0.48
TSPAN4-218ENST00000529566 Q8WTZ3 238 aa12.03□□□□□ -0.48
TSPAN4-218ENST00000529566 MARVELD1Q9BSK0 173 aa12.03□□□□□ -0.48
TSPAN4-218ENST00000529566 PSENENQ9NZ42 101 aa12.03□□□□□ -0.48
TSPAN4-218ENST00000529566 PAIP2BQ9ULR5 123 aaKnown RBP12.03□□□□□ -0.48
TSPAN4-218ENST00000529566 STRAPQ9Y3F4 350 aaKnown RBP12.03□□□□□ -0.48
TSPAN4-218ENST00000529566 IGHV3-66A0A0C4DH42 116 aa12.02□□□□□ -0.49
TSPAN4-218ENST00000529566 RBMY1BA6NDE4 496 aaKnown RBP12.02□□□□□ -0.49
TSPAN4-218ENST00000529566 RBMY1EA6NEQ0 496 aaKnown RBP12.02□□□□□ -0.49
TSPAN4-218ENST00000529566 RBMY1DP0C7P1 496 aaKnown RBP12.02□□□□□ -0.49
TSPAN4-218ENST00000529566 RD3LP0DJH9 198 aa12.02□□□□□ -0.49
TSPAN4-218ENST00000529566 PSG1P11464 419 aa12.02□□□□□ -0.49
TSPAN4-218ENST00000529566 ZNF90Q03938 601 aa12.02□□□□□ -0.49
TSPAN4-218ENST00000529566 USF2Q15853 346 aaPredicted RBP12.02□□□□□ -0.49
TSPAN4-218ENST00000529566 HAGHQ16775 308 aa12.02□□□□□ -0.49
TSPAN4-218ENST00000529566 TMEM14EPQ6UXP3 125 aa12.02□□□□□ -0.49
TSPAN4-218ENST00000529566 THAP8Q8NA92 274 aa12.02□□□□□ -0.49
TSPAN4-218ENST00000529566 SLC35E1Q96K37 410 aa12.02□□□□□ -0.49
TSPAN4-218ENST00000529566 METTL26Q96S19 204 aa12.02□□□□□ -0.49
TSPAN4-218ENST00000529566 RAB40CQ96S21 281 aa12.02□□□□□ -0.49
TSPAN4-218ENST00000529566 TUBA4BQ9H853 241 aa12.02□□□□□ -0.49
TSPAN4-218ENST00000529566 DFFBO76075 338 aa12.01□□□□□ -0.49
TSPAN4-218ENST00000529566 SCGB1D2O95969 90 aa12.01□□□□□ -0.49
TSPAN4-218ENST00000529566 TAS2R30P59541 319 aa12.01□□□□□ -0.49
TSPAN4-218ENST00000529566 TCF24Q7RTU0 167 aa12.01□□□□□ -0.49
TSPAN4-218ENST00000529566 C2orf50Q96LR7 162 aa12.01□□□□□ -0.49
TSPAN4-218ENST00000529566 CITED4Q96RK1 184 aa12.01□□□□□ -0.49
TSPAN4-218ENST00000529566 TM2D3Q9BRN9 247 aa12.01□□□□□ -0.49
TSPAN4-218ENST00000529566 C11orf1Q9H5F2 150 aa12.01□□□□□ -0.49
TSPAN4-218ENST00000529566 SRD5A3Q9H8P0 318 aa12.01□□□□□ -0.49
TSPAN4-218ENST00000529566 C7orf66A4D0T2 115 aa12□□□□□ -0.49
TSPAN4-218ENST00000529566 ZFP92A6NM28 416 aa12□□□□□ -0.49
TSPAN4-218ENST00000529566 SNRPGP15A8MWD9 76 aa12□□□□□ -0.49
TSPAN4-218ENST00000529566 FAM25EA8MYX2 175 aa12□□□□□ -0.49
TSPAN4-218ENST00000529566 INMT-MINDY4F8WBC2 141 aa12□□□□□ -0.49
TSPAN4-218ENST00000529566 CCNKO75909 580 aa12□□□□□ -0.49
TSPAN4-218ENST00000529566 IL4P05112 153 aa12□□□□□ -0.49
TSPAN4-218ENST00000529566 CD5P06127 495 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms