RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 PPTC7Q8NI37 304 aa2.18□□□□□ -2.06
CTR9-204ENST00000529355 OR5P2Q8WZ92 322 aa2.18□□□□□ -2.06
CTR9-204ENST00000529355 OR5P3Q8WZ94 311 aa2.18□□□□□ -2.06
CTR9-204ENST00000529355 TRIB3Q96RU7 358 aa2.18□□□□□ -2.06
CTR9-204ENST00000529355 IMMP2LQ96T52 175 aa2.18□□□□□ -2.06
CTR9-204ENST00000529355 VAMP8Q9BV40 100 aa2.18□□□□□ -2.06
CTR9-204ENST00000529355 C1QTNF6Q9BXI9 259 aa2.18□□□□□ -2.06
CTR9-204ENST00000529355 DPY30Q9C005 99 aa2.18□□□□□ -2.06
CTR9-204ENST00000529355 GTSF1LQ9H1H1 148 aa2.18□□□□□ -2.06
CTR9-204ENST00000529355 ATG5Q9H1Y0 275 aa2.18□□□□□ -2.06
CTR9-204ENST00000529355 OR51I2Q9H344 312 aa2.18□□□□□ -2.06
CTR9-204ENST00000529355 SMDT1Q9H4I9 107 aa2.18□□□□□ -2.06
CTR9-204ENST00000529355 ACER3Q9NUN7 267 aa2.18□□□□□ -2.06
CTR9-204ENST00000529355 DNAJC27Q9NZQ0 273 aa2.18□□□□□ -2.06
CTR9-204ENST00000529355 COMMD9Q9P000 198 aa2.18□□□□□ -2.06
CTR9-204ENST00000529355 ANXA10Q9UJ72 324 aa2.18□□□□□ -2.06
CTR9-204ENST00000529355 TP53TG1Q9Y2A0 90 aa2.18□□□□□ -2.06
CTR9-204ENST00000529355 RCL1Q9Y2P8 373 aaKnown RBP2.18□□□□□ -2.06
CTR9-204ENST00000529355 NOP16Q9Y3C1 178 aaKnown RBP2.18□□□□□ -2.06
CTR9-204ENST00000529355 SOX21Q9Y651 276 aaPredicted RBP2.18□□□□□ -2.06
CTR9-204ENST00000529355 PLIN4Q96Q06 1357 aa2.18□□□□□ -2.06
CTR9-204ENST00000529355 GLI3P10071 1580 aa2.18□□□□□ -2.06
CTR9-204ENST00000529355 RGPD2P0DJD1 1756 aa2.18□□□□□ -2.06
CTR9-204ENST00000529355 KMT2EQ8IZD2 1858 aa2.18□□□□□ -2.06
CTR9-204ENST00000529355 ZFC3H1O60293 1989 aaKnown RBP2.18□□□□□ -2.06
CTR9-204ENST00000529355 C10orf71Q711Q0 1435 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 PRG4Q92954 1404 aaPredicted RBP2.17□□□□□ -2.06
CTR9-204ENST00000529355 ALKQ9UM73 1620 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 NUP188Q5SRE5 1749 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 XRN1Q8IZH2 1706 aaKnown RBP2.17□□□□□ -2.06
CTR9-204ENST00000529355 COL5A1P20908 1838 aaPredicted RBP2.17□□□□□ -2.06
CTR9-204ENST00000529355 ALPK3Q96L96 1907 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 IGHV3-49A0A0A0MS15 119 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 KANTRA0A1W2PQU2 76 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 DHRS12A0PJE2 317 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 TSPAN11A1L157 253 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 MCRIP1C9JLW8 97 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 H7BYZ3 331 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 HIST1H2BKO60814 126 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 SIX6O95475 246 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 HIST1H2BJP06899 126 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 CTSDP07339 412 aaPredicted RBP2.17□□□□□ -2.06
CTR9-204ENST00000529355 LINC00032P0C843 101 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 IGLC1P0CG04 106 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 HIST1H2BOP23527 126 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 GRPRP30550 384 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 HIST1H2BBP33778 126 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 SDC2P34741 201 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 GLRXP35754 106 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 ZNF93P35789 620 aaPredicted RBP2.17□□□□□ -2.06
CTR9-204ENST00000529355 HIST1H2BDP58876 126 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 HIST1H2BCP62807 126 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 RPL31P62899 125 aaKnown RBP2.17□□□□□ -2.06
CTR9-204ENST00000529355 PSG9Q00887 426 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 FMODQ06828 376 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 FAM53BQ14153 422 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 HIST2H2BEQ16778 126 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 ACOT6Q3I5F7 207 aaPredicted RBP2.17□□□□□ -2.06
CTR9-204ENST00000529355 SLC25A35Q3KQZ1 300 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.17□□□□□ -2.06
CTR9-204ENST00000529355 BCL2L15Q5TBC7 163 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 C1orf195Q5TG92 126 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 TMEM215Q68D42 235 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 ZNF660Q6AZW8 331 aaPredicted RBP2.17□□□□□ -2.06
CTR9-204ENST00000529355 HBMQ6B0K9 141 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 OR2T2Q6IF00 324 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 SBSNQ6UWP8 590 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 ALKAL1Q6UXT8 129 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 OOSP2Q86WS3 158 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 OR8G5Q8NG78 346 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 OR11G2Q8NGC1 345 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 OR5AK2Q8NH90 309 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 MFSD8Q8NHS3 518 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 THEM6Q8WUY1 208 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 BLNKQ8WV28 456 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 HIST1H2BHQ93079 126 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 SLAMF6Q96DU3 332 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 IP6K3Q96PC2 410 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 AP1S3Q96PC3 154 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 DERL3Q96Q80 235 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 HIST1H2BNQ99877 126 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 HIST1H2BMQ99879 126 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 GABRG3Q99928 467 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 TMEM133Q9H2Q1 129 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 RPRMQ9NS64 109 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 FKBP11Q9NYL4 201 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 IDI2-AS1Q9NZ38 188 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 CCDC167Q9P0B6 97 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 HDGFL3Q9Y3E1 203 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 IER3IP1Q9Y5U9 82 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 V9GYH0 126 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 A2ML1A8K2U0 1454 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 FRMPD1Q5SYB0 1578 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 PLCH1Q4KWH8 1693 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 RGPD3A6NKT7 1758 aaPredicted RBP2.17□□□□□ -2.06
CTR9-204ENST00000529355 NUP210Q8TEM1 1887 aaPredicted RBP2.17□□□□□ -2.06
CTR9-204ENST00000529355 TNRC6AQ8NDV7 1962 aaKnown RBP2.17□□□□□ -2.06
CTR9-204ENST00000529355 CPS1P31327 1500 aa2.17□□□□□ -2.06
CTR9-204ENST00000529355 NINQ8N4C6 2090 aa2.16□□□□□ -2.06
CTR9-204ENST00000529355 ADAMTSL1Q8N6G6 1762 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms