RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 SRP14P37108 136 aaKnown RBP9.43□□□□□ -0.9
USF1-208ENST00000528768 UBE2G2P60604 165 aa9.43□□□□□ -0.9
USF1-208ENST00000528768 SRSF2Q01130 221 aaKnown RBP9.43□□□□□ -0.9
USF1-208ENST00000528768 KIAA0141Q14154 515 aaPredicted RBP9.43□□□□□ -0.9
USF1-208ENST00000528768 GCSAMLQ5JQS6 135 aa9.43□□□□□ -0.9
USF1-208ENST00000528768 C11orf71Q6IPW1 123 aa9.43□□□□□ -0.9
USF1-208ENST00000528768 C1orf122Q6ZSJ8 110 aa9.43□□□□□ -0.9
USF1-208ENST00000528768 OR10W1Q8NGF6 305 aa9.43□□□□□ -0.9
USF1-208ENST00000528768 Q8WTZ3 238 aa9.43□□□□□ -0.9
USF1-208ENST00000528768 SSX3Q99909 188 aa9.43□□□□□ -0.9
USF1-208ENST00000528768 SSBP3Q9BWW4 388 aaPredicted RBP9.43□□□□□ -0.9
USF1-208ENST00000528768 DPM3Q9P2X0 92 aa9.43□□□□□ -0.9
USF1-208ENST00000528768 OOSP1A8MZH6 123 aa9.42□□□□□ -0.9
USF1-208ENST00000528768 EIF3GO75821 320 aaKnown RBP eCLIP9.42□□□□□ -0.9
USF1-208ENST00000528768 OR5G3P0C626 314 aa9.42□□□□□ -0.9
USF1-208ENST00000528768 C8orf88P0DMB2 117 aa9.42□□□□□ -0.9
USF1-208ENST00000528768 GPR6P46095 362 aaPredicted RBP9.42□□□□□ -0.9
USF1-208ENST00000528768 GALR1P47211 349 aa9.42□□□□□ -0.9
USF1-208ENST00000528768 DIAPH2-AS1Q14236 149 aa9.42□□□□□ -0.9
USF1-208ENST00000528768 PLGLAQ15195 96 aa9.42□□□□□ -0.9
USF1-208ENST00000528768 PSG5Q15238 335 aa9.42□□□□□ -0.9
USF1-208ENST00000528768 TNXAQ16473 311 aa9.42□□□□□ -0.9
USF1-208ENST00000528768 TPTE2P1Q5T6R2 138 aa9.42□□□□□ -0.9
USF1-208ENST00000528768 CCDC144NLQ6NUI1 221 aa9.42□□□□□ -0.9
USF1-208ENST00000528768 C16orf82Q7Z2V1 217 aa9.42□□□□□ -0.9
USF1-208ENST00000528768 KIR3DL3Q8N743 410 aa9.42□□□□□ -0.9
USF1-208ENST00000528768 ZNF114Q8NC26 417 aa9.42□□□□□ -0.9
USF1-208ENST00000528768 OR1L6Q8NGR2 347 aa9.42□□□□□ -0.9
USF1-208ENST00000528768 ACY3Q96HD9 319 aa9.42□□□□□ -0.9
USF1-208ENST00000528768 METTL1Q9UBP6 276 aaKnown RBP9.42□□□□□ -0.9
USF1-208ENST00000528768 URGCP-MRPS24S4R325 110 aa9.42□□□□□ -0.9
USF1-208ENST00000528768 DOCK11Q5JSL3 2073 aa9.42□□□□□ -0.9
USF1-208ENST00000528768 MDFIC2A0A1B0GVS7 189 aa9.41□□□□□ -0.9
USF1-208ENST00000528768 TCRBV4S1A1TA0A5B7 111 aa9.41□□□□□ -0.9
USF1-208ENST00000528768 C5orf52A6NGY3 159 aa9.41□□□□□ -0.9
USF1-208ENST00000528768 UBE2CO00762 179 aa9.41□□□□□ -0.9
USF1-208ENST00000528768 COX7A2P2O60397 106 aa9.41□□□□□ -0.9
USF1-208ENST00000528768 FABP1P07148 127 aa9.41□□□□□ -0.9
USF1-208ENST00000528768 RPL35P42766 123 aaKnown RBP9.41□□□□□ -0.9
USF1-208ENST00000528768 ATP5G3P48201 142 aa9.41□□□□□ -0.9
USF1-208ENST00000528768 SNRPEP62304 92 aaKnown RBP9.41□□□□□ -0.9
USF1-208ENST00000528768 RPL19P84098 196 aaKnown RBP9.41□□□□□ -0.9
USF1-208ENST00000528768 PPP1R27Q86WC6 154 aa9.41□□□□□ -0.9
USF1-208ENST00000528768 C3orf56Q8N813 242 aa9.41□□□□□ -0.9
USF1-208ENST00000528768 THAP8Q8NA92 274 aa9.41□□□□□ -0.9
USF1-208ENST00000528768 STXBP6Q8NFX7 210 aa9.41□□□□□ -0.9
USF1-208ENST00000528768 OR11H6Q8NGC7 330 aa9.41□□□□□ -0.9
USF1-208ENST00000528768 C10orf105Q8TEF2 133 aa9.41□□□□□ -0.9
USF1-208ENST00000528768 C1orf159Q96HA4 380 aa9.41□□□□□ -0.9
USF1-208ENST00000528768 IMMP2LQ96T52 175 aa9.41□□□□□ -0.9
USF1-208ENST00000528768 SEPSECSQ9HD40 501 aaKnown RBP9.41□□□□□ -0.9
USF1-208ENST00000528768 DNAJC4Q9NNZ3 241 aa9.41□□□□□ -0.9
USF1-208ENST00000528768 SIGLEC9Q9Y336 463 aa9.41□□□□□ -0.9
USF1-208ENST00000528768 LY96Q9Y6Y9 160 aa9.41□□□□□ -0.9
USF1-208ENST00000528768 ELOA3CA0A087WX78 387 aaPredicted RBP9.4□□□□□ -0.9
USF1-208ENST00000528768 TGIF2-C20orf24A0A0A6YYL0 155 aa9.4□□□□□ -0.9
USF1-208ENST00000528768 IGHV3-72A0A0B4J1Y9 119 aa9.4□□□□□ -0.9
USF1-208ENST00000528768 NDUFS8O00217 210 aa9.4□□□□□ -0.9
USF1-208ENST00000528768 OR7C2O60412 319 aa9.4□□□□□ -0.9
USF1-208ENST00000528768 NDUFB4O95168 129 aa9.4□□□□□ -0.9
USF1-208ENST00000528768 CRYGBP07316 175 aa9.4□□□□□ -0.9
USF1-208ENST00000528768 CXCL1P09341 107 aa9.4□□□□□ -0.9
USF1-208ENST00000528768 PRTN3P24158 256 aa9.4□□□□□ -0.9
USF1-208ENST00000528768 GNB1P62873 340 aa9.4□□□□□ -0.9
USF1-208ENST00000528768 PAX2Q02962 417 aa9.4□□□□□ -0.9
USF1-208ENST00000528768 WT1-ASQ06250 92 aa9.4□□□□□ -0.9
USF1-208ENST00000528768 SCGB2A2Q13296 93 aa9.4□□□□□ -0.9
USF1-208ENST00000528768 LINC00518Q8N0U6 118 aa9.4□□□□□ -0.9
USF1-208ENST00000528768 OR1P1Q8NH06 330 aa9.4□□□□□ -0.9
USF1-208ENST00000528768 C11orf52Q96A22 123 aa9.4□□□□□ -0.9
USF1-208ENST00000528768 SRD5A3Q9H8P0 318 aa9.4□□□□□ -0.9
USF1-208ENST00000528768 MALRD1Q5VYJ5 2156 aa9.39□□□□□ -0.91
USF1-208ENST00000528768 SVEP1Q4LDE5 3571 aa9.39□□□□□ -0.91
USF1-208ENST00000528768 A0A1W2PPI3 338 aa9.39□□□□□ -0.91
USF1-208ENST00000528768 A0A1W2PRE2 83 aa9.39□□□□□ -0.91
USF1-208ENST00000528768 C9JCJ5 164 aa9.39□□□□□ -0.91
USF1-208ENST00000528768 PPP5D1E7EU14 171 aa9.39□□□□□ -0.91
USF1-208ENST00000528768 LY6LH3BQJ8 138 aa9.39□□□□□ -0.91
USF1-208ENST00000528768 C10orf113Q5VZT2 155 aa9.39□□□□□ -0.91
USF1-208ENST00000528768 PVRIGQ6DKI7 326 aa9.39□□□□□ -0.91
USF1-208ENST00000528768 ZNF343Q6P1L6 599 aa9.39□□□□□ -0.91
USF1-208ENST00000528768 MIR17HGQ75NE6 70 aa9.39□□□□□ -0.91
USF1-208ENST00000528768 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.39□□□□□ -0.91
USF1-208ENST00000528768 OR2T10Q8NGZ9 312 aa9.39□□□□□ -0.91
USF1-208ENST00000528768 OR2T6Q8NHC8 308 aa9.39□□□□□ -0.91
USF1-208ENST00000528768 TMEM190Q8WZ59 177 aa9.39□□□□□ -0.91
USF1-208ENST00000528768 NPIPB3Q92617 1050 aa9.39□□□□□ -0.91
USF1-208ENST00000528768 MISP3Q96FF7 219 aa9.39□□□□□ -0.91
USF1-208ENST00000528768 TRGV9Q99603 122 aa9.39□□□□□ -0.91
USF1-208ENST00000528768 TET2Q6N021 2002 aaPredicted RBP9.39□□□□□ -0.91
USF1-208ENST00000528768 ARFGEF3Q5TH69 2177 aa9.39□□□□□ -0.91
USF1-208ENST00000528768 IGLC7A0M8Q6 106 aa9.38□□□□□ -0.91
USF1-208ENST00000528768 C22orf46C9J442 243 aa9.38□□□□□ -0.91
USF1-208ENST00000528768 CNIH1O95406 144 aa9.38□□□□□ -0.91
USF1-208ENST00000528768 MOSP00540 346 aa9.38□□□□□ -0.91
USF1-208ENST00000528768 PFN1P07737 140 aaKnown RBP9.38□□□□□ -0.91
USF1-208ENST00000528768 DEFA4P12838 97 aa9.38□□□□□ -0.91
USF1-208ENST00000528768 EFNA4P52798 201 aa9.38□□□□□ -0.91
USF1-208ENST00000528768 LGALS4P56470 323 aa9.38□□□□□ -0.91
USF1-208ENST00000528768 FAM3BP58499 235 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms