RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 IGHV3-49A0A0A0MS15 119 aa12.59□□□□□ -0.39
HIF3A-211ENST00000528563 OR11H12B2RN74 326 aa12.59□□□□□ -0.39
HIF3A-211ENST00000528563 IFNA21P01568 189 aa12.59□□□□□ -0.39
HIF3A-211ENST00000528563 IFNA4P05014 189 aa12.59□□□□□ -0.39
HIF3A-211ENST00000528563 GPX4P36969 197 aaPredicted RBP12.59□□□□□ -0.39
HIF3A-211ENST00000528563 YPEL3P61236 119 aaPredicted RBP12.59□□□□□ -0.39
HIF3A-211ENST00000528563 LAMTOR1Q6IAA8 161 aa12.59□□□□□ -0.39
HIF3A-211ENST00000528563 SLC16A13Q7RTY0 426 aa12.59□□□□□ -0.39
HIF3A-211ENST00000528563 DEFB125Q8N687 156 aa12.59□□□□□ -0.39
HIF3A-211ENST00000528563 OR52B4Q8NGK2 314 aa12.59□□□□□ -0.39
HIF3A-211ENST00000528563 CIB3Q96Q77 187 aaPredicted RBP12.59□□□□□ -0.39
HIF3A-211ENST00000528563 RNF2Q99496 336 aa12.59□□□□□ -0.39
HIF3A-211ENST00000528563 SPAG8Q99932 426 aaPredicted RBP12.59□□□□□ -0.39
HIF3A-211ENST00000528563 NUDT15Q9NV35 164 aa12.59□□□□□ -0.39
HIF3A-211ENST00000528563 U3KQK5 164 aa12.59□□□□□ -0.39
HIF3A-211ENST00000528563 TRAV6A0A075B6T7 132 aa12.59□□□□□ -0.39
HIF3A-211ENST00000528563 SCGB2A1O75556 95 aa12.59□□□□□ -0.39
HIF3A-211ENST00000528563 UPK1BO75841 260 aa12.59□□□□□ -0.39
HIF3A-211ENST00000528563 APOHP02749 345 aaPredicted RBP12.59□□□□□ -0.39
HIF3A-211ENST00000528563 IAPPP10997 89 aa12.59□□□□□ -0.39
HIF3A-211ENST00000528563 OR10J1P30954 320 aa12.59□□□□□ -0.39
HIF3A-211ENST00000528563 IFITM3Q01628 133 aa12.59□□□□□ -0.39
HIF3A-211ENST00000528563 FAM90A2PQ658T7 463 aa12.59□□□□□ -0.39
HIF3A-211ENST00000528563 MZT2BQ6NZ67 158 aa12.59□□□□□ -0.39
HIF3A-211ENST00000528563 OR4D5Q8NGN0 318 aa12.59□□□□□ -0.39
HIF3A-211ENST00000528563 OR1S2Q8NGQ3 325 aa12.59□□□□□ -0.39
HIF3A-211ENST00000528563 VSIRQ9H7M9 311 aa12.59□□□□□ -0.39
HIF3A-211ENST00000528563 FAM240BA0A1B0GVZ2 78 aa12.58□□□□□ -0.4
HIF3A-211ENST00000528563 WRBO00258 174 aa12.58□□□□□ -0.4
HIF3A-211ENST00000528563 GAMTQ14353 236 aa12.58□□□□□ -0.4
HIF3A-211ENST00000528563 LILRB2Q8N423 598 aa12.58□□□□□ -0.4
HIF3A-211ENST00000528563 WFDC10AQ9H1F0 79 aa12.58□□□□□ -0.4
HIF3A-211ENST00000528563 IGHV3OR16-13A0A075B7E8 117 aa12.57□□□□□ -0.4
HIF3A-211ENST00000528563 IGHV3-74A0A0B4J1X5 117 aa12.57□□□□□ -0.4
HIF3A-211ENST00000528563 H2AFB2P0C5Z0 115 aa12.57□□□□□ -0.4
HIF3A-211ENST00000528563 NPPCP23582 126 aa12.57□□□□□ -0.4
HIF3A-211ENST00000528563 CRYBB3P26998 211 aa12.57□□□□□ -0.4
HIF3A-211ENST00000528563 HAGHQ16775 308 aa12.57□□□□□ -0.4
HIF3A-211ENST00000528563 Q8WTZ3 238 aa12.57□□□□□ -0.4
HIF3A-211ENST00000528563 ACY3Q96HD9 319 aa12.57□□□□□ -0.4
HIF3A-211ENST00000528563 TM2D3Q9BRN9 247 aa12.57□□□□□ -0.4
HIF3A-211ENST00000528563 RBMY1BA6NDE4 496 aaKnown RBP12.56□□□□□ -0.4
HIF3A-211ENST00000528563 RBMY1EA6NEQ0 496 aaKnown RBP12.56□□□□□ -0.4
HIF3A-211ENST00000528563 RBMY1DP0C7P1 496 aaKnown RBP12.56□□□□□ -0.4
HIF3A-211ENST00000528563 RAB11AP62491 216 aa12.56□□□□□ -0.4
HIF3A-211ENST00000528563 RPP30P78346 268 aaKnown RBP12.56□□□□□ -0.4
HIF3A-211ENST00000528563 ZNF431Q8TF32 576 aaPredicted RBP12.56□□□□□ -0.4
HIF3A-211ENST00000528563 ST8SIA2Q92186 375 aa12.56□□□□□ -0.4
HIF3A-211ENST00000528563 PRSS46E5RG02 174 aa12.55□□□□□ -0.4
HIF3A-211ENST00000528563 CD5P06127 495 aa12.55□□□□□ -0.4
HIF3A-211ENST00000528563 NKX2-1P43699 371 aaPredicted RBP12.55□□□□□ -0.4
HIF3A-211ENST00000528563 POLR2GP62487 172 aaKnown RBP eCLIP12.55□□□□□ -0.4
HIF3A-211ENST00000528563 IAH1Q2TAA2 248 aaPredicted RBP12.55□□□□□ -0.4
HIF3A-211ENST00000528563 SEC22CQ9BRL7 303 aa12.55□□□□□ -0.4
HIF3A-211ENST00000528563 SRD5A3Q9H8P0 318 aa12.55□□□□□ -0.4
HIF3A-211ENST00000528563 U3KQE9 123 aa12.55□□□□□ -0.4
HIF3A-211ENST00000528563 OR4C46A6NHA9 309 aa12.54□□□□□ -0.4
HIF3A-211ENST00000528563 TOMM40O96008 361 aa12.54□□□□□ -0.4
HIF3A-211ENST00000528563 RD3LP0DJH9 198 aa12.54□□□□□ -0.4
HIF3A-211ENST00000528563 BMI1P35226 326 aa12.54□□□□□ -0.4
HIF3A-211ENST00000528563 SPANXN5Q5MJ07 72 aa12.54□□□□□ -0.4
HIF3A-211ENST00000528563 TCF24Q7RTU0 167 aa12.54□□□□□ -0.4
HIF3A-211ENST00000528563 ZBTB8BQ8NAP8 495 aaPredicted RBP12.54□□□□□ -0.4
HIF3A-211ENST00000528563 SMIM8Q96KF7 97 aa12.54□□□□□ -0.4
HIF3A-211ENST00000528563 METTL26Q96S19 204 aa12.54□□□□□ -0.4
HIF3A-211ENST00000528563 IGKV1D-37A0A075B6S9 117 aa12.53□□□□□ -0.4
HIF3A-211ENST00000528563 IGHV3-66A0A0C4DH42 116 aa12.53□□□□□ -0.4
HIF3A-211ENST00000528563 A0A1W2PS18 150 aa12.53□□□□□ -0.4
HIF3A-211ENST00000528563 DFFBO76075 338 aa12.53□□□□□ -0.4
HIF3A-211ENST00000528563 PSG1P11464 419 aa12.53□□□□□ -0.4
HIF3A-211ENST00000528563 PAX9P55771 341 aa12.53□□□□□ -0.4
HIF3A-211ENST00000528563 C12orf45Q8N5I9 185 aaPredicted RBP12.53□□□□□ -0.4
HIF3A-211ENST00000528563 SLC35E1Q96K37 410 aa12.53□□□□□ -0.4
HIF3A-211ENST00000528563 RCHY1Q96PM5 261 aa12.53□□□□□ -0.4
HIF3A-211ENST00000528563 CITED4Q96RK1 184 aa12.53□□□□□ -0.4
HIF3A-211ENST00000528563 FAM110AQ9BQ89 295 aa12.53□□□□□ -0.4
HIF3A-211ENST00000528563 ZMAT4Q9H898 229 aa12.53□□□□□ -0.4
HIF3A-211ENST00000528563 GSKIPQ9P0R6 139 aa12.53□□□□□ -0.4
HIF3A-211ENST00000528563 PAIP2BQ9ULR5 123 aaKnown RBP12.53□□□□□ -0.4
HIF3A-211ENST00000528563 STRAPQ9Y3F4 350 aaKnown RBP12.53□□□□□ -0.4
HIF3A-211ENST00000528563 IL5P05113 134 aa12.53□□□□□ -0.4
HIF3A-211ENST00000528563 ODF3L2Q3SX64 289 aa12.53□□□□□ -0.4
HIF3A-211ENST00000528563 WWC2-AS2Q96NR7 200 aa12.53□□□□□ -0.4
HIF3A-211ENST00000528563 TMEM231Q9H6L2 316 aa12.53□□□□□ -0.4
HIF3A-211ENST00000528563 PSENENQ9NZ42 101 aa12.53□□□□□ -0.4
HIF3A-211ENST00000528563 H3BP45 60 aa12.52□□□□□ -0.41
HIF3A-211ENST00000528563 USF2Q15853 346 aaPredicted RBP12.52□□□□□ -0.41
HIF3A-211ENST00000528563 GBGT1Q8N5D6 347 aa12.52□□□□□ -0.41
HIF3A-211ENST00000528563 IGKV3-7A0A075B6H7 116 aa12.51□□□□□ -0.41
HIF3A-211ENST00000528563 IGKV1OR2-108A0A075B7D4 117 aa12.51□□□□□ -0.41
HIF3A-211ENST00000528563 ZFP92A6NM28 416 aa12.51□□□□□ -0.41
HIF3A-211ENST00000528563 CCSO14618 274 aa12.51□□□□□ -0.41
HIF3A-211ENST00000528563 SSSCA1O60232 199 aa12.51□□□□□ -0.41
HIF3A-211ENST00000528563 MBPP02686 304 aaPredicted RBP12.51□□□□□ -0.41
HIF3A-211ENST00000528563 IL4P05112 153 aa12.51□□□□□ -0.41
HIF3A-211ENST00000528563 TAS2R30P59541 319 aa12.51□□□□□ -0.41
HIF3A-211ENST00000528563 PAFAH1B2P68402 229 aa12.51□□□□□ -0.41
HIF3A-211ENST00000528563 ZNF90Q03938 601 aa12.51□□□□□ -0.41
HIF3A-211ENST00000528563 THAP8Q8NA92 274 aa12.51□□□□□ -0.41
HIF3A-211ENST00000528563 OR51G1Q8NGK1 321 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms