RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 DNAH11Q96DT5 4516 aa11.6□□□□□ -0.55
PTPRU-210ENST00000527027 CORTO00230 105 aa11.6□□□□□ -0.55
PTPRU-210ENST00000527027 RTL8CO15255 209 aa11.6□□□□□ -0.55
PTPRU-210ENST00000527027 GSTZ1O43708 216 aaPredicted RBP11.6□□□□□ -0.55
PTPRU-210ENST00000527027 CLN5O75503 358 aa11.6□□□□□ -0.55
PTPRU-210ENST00000527027 PPP5CP53041 499 aa11.6□□□□□ -0.55
PTPRU-210ENST00000527027 ZNF846Q147U1 533 aa11.6□□□□□ -0.55
PTPRU-210ENST00000527027 PYDC2Q56P42 97 aa11.6□□□□□ -0.55
PTPRU-210ENST00000527027 SLC35G3Q8N808 338 aa11.6□□□□□ -0.55
PTPRU-210ENST00000527027 GPX8Q8TED1 209 aa11.6□□□□□ -0.55
PTPRU-210ENST00000527027 TMEM230Q96A57 120 aa11.6□□□□□ -0.55
PTPRU-210ENST00000527027 NARS2Q96I59 477 aaKnown RBP11.6□□□□□ -0.55
PTPRU-210ENST00000527027 RAB40CQ96S21 281 aa11.6□□□□□ -0.55
PTPRU-210ENST00000527027 CELA1Q9UNI1 258 aa11.6□□□□□ -0.55
PTPRU-210ENST00000527027 A0A0B4J293 547 aa11.59□□□□□ -0.55
PTPRU-210ENST00000527027 IFNA17P01571 189 aa11.59□□□□□ -0.55
PTPRU-210ENST00000527027 RNASE2P10153 161 aaKnown RBP11.59□□□□□ -0.55
PTPRU-210ENST00000527027 RCVRNP35243 200 aa11.59□□□□□ -0.55
PTPRU-210ENST00000527027 ZNF767PQ75MW2 155 aa11.59□□□□□ -0.55
PTPRU-210ENST00000527027 OR4X1Q8NH49 305 aa11.59□□□□□ -0.55
PTPRU-210ENST00000527027 SMIM4Q8WVI0 70 aa11.59□□□□□ -0.55
PTPRU-210ENST00000527027 DEDD2Q8WXF8 326 aa11.59□□□□□ -0.55
PTPRU-210ENST00000527027 ABHD1Q96SE0 405 aa11.59□□□□□ -0.55
PTPRU-210ENST00000527027 NDUFAF3Q9BU61 184 aa11.59□□□□□ -0.55
PTPRU-210ENST00000527027 FNDC4Q9H6D8 234 aaPredicted RBP11.59□□□□□ -0.55
PTPRU-210ENST00000527027 MRPL36Q9P0J6 103 aaKnown RBP11.59□□□□□ -0.55
PTPRU-210ENST00000527027 V9GYH0 126 aa11.59□□□□□ -0.55
PTPRU-210ENST00000527027 M0R2N4 97 aa11.58□□□□□ -0.56
PTPRU-210ENST00000527027 SCGB2A1O75556 95 aa11.58□□□□□ -0.56
PTPRU-210ENST00000527027 IGKV1-5P01602 117 aa11.58□□□□□ -0.56
PTPRU-210ENST00000527027 P0C879 139 aa11.58□□□□□ -0.56
PTPRU-210ENST00000527027 TBPP20226 339 aa11.58□□□□□ -0.56
PTPRU-210ENST00000527027 NPY1RP25929 384 aa11.58□□□□□ -0.56
PTPRU-210ENST00000527027 EIF2B2P49770 351 aaKnown RBP11.58□□□□□ -0.56
PTPRU-210ENST00000527027 AP3S2P59780 193 aa11.58□□□□□ -0.56
PTPRU-210ENST00000527027 DHRS2Q13268 280 aa11.58□□□□□ -0.56
PTPRU-210ENST00000527027 MLANAQ16655 118 aa11.58□□□□□ -0.56
PTPRU-210ENST00000527027 CCDC32Q9BV29 185 aa11.58□□□□□ -0.56
PTPRU-210ENST00000527027 MTFP1Q9UDX5 166 aa11.58□□□□□ -0.56
PTPRU-210ENST00000527027 HELTA6NFD8 242 aa11.57□□□□□ -0.56
PTPRU-210ENST00000527027 IGKV1-17P01599 117 aa11.57□□□□□ -0.56
PTPRU-210ENST00000527027 OPRK1P41145 380 aa11.57□□□□□ -0.56
PTPRU-210ENST00000527027 INPP1P49441 399 aa11.57□□□□□ -0.56
PTPRU-210ENST00000527027 AP2S1P53680 142 aaPredicted RBP11.57□□□□□ -0.56
PTPRU-210ENST00000527027 LGALS9BQ3B8N2 356 aa11.57□□□□□ -0.56
PTPRU-210ENST00000527027 PDCD10Q9BUL8 212 aa11.57□□□□□ -0.56
PTPRU-210ENST00000527027 SCRT1Q9BWW7 348 aa11.57□□□□□ -0.56
PTPRU-210ENST00000527027 C1QTNF4Q9BXJ3 329 aa11.57□□□□□ -0.56
PTPRU-210ENST00000527027 U3KQE9 123 aa11.57□□□□□ -0.56
PTPRU-210ENST00000527027 TRAV30A0A087WSZ9 112 aa11.56□□□□□ -0.56
PTPRU-210ENST00000527027 ATG12O94817 140 aa11.56□□□□□ -0.56
PTPRU-210ENST00000527027 FAUP35544 74 aaKnown RBP11.56□□□□□ -0.56
PTPRU-210ENST00000527027 HOXA1P49639 335 aaPredicted RBP11.56□□□□□ -0.56
PTPRU-210ENST00000527027 AKR1C2P52895 323 aa11.56□□□□□ -0.56
PTPRU-210ENST00000527027 TAS2R19P59542 299 aa11.56□□□□□ -0.56
PTPRU-210ENST00000527027 RND3P61587 244 aa11.56□□□□□ -0.56
PTPRU-210ENST00000527027 NUTF2P61970 127 aaKnown RBP11.56□□□□□ -0.56
PTPRU-210ENST00000527027 TIGITQ495A1 244 aa11.56□□□□□ -0.56
PTPRU-210ENST00000527027 PSMG4Q5JS54 123 aa11.56□□□□□ -0.56
PTPRU-210ENST00000527027 TRIQKQ629K1 86 aa11.56□□□□□ -0.56
PTPRU-210ENST00000527027 OR52I2Q8NH67 350 aa11.56□□□□□ -0.56
PTPRU-210ENST00000527027 MUC4Q99102 2169 aa11.56□□□□□ -0.56
PTPRU-210ENST00000527027 SRRQ9GZT4 340 aa11.56□□□□□ -0.56
PTPRU-210ENST00000527027 ENY2Q9NPA8 101 aa11.56□□□□□ -0.56
PTPRU-210ENST00000527027 ZNF79Q15937 498 aa11.55□□□□□ -0.56
PTPRU-210ENST00000527027 C16orf54Q6UWD8 224 aa11.55□□□□□ -0.56
PTPRU-210ENST00000527027 TMEM229BQ8NBD8 167 aa11.55□□□□□ -0.56
PTPRU-210ENST00000527027 Q8WTZ3 238 aa11.55□□□□□ -0.56
PTPRU-210ENST00000527027 ZNF486Q96H40 463 aaPredicted RBP11.55□□□□□ -0.56
PTPRU-210ENST00000527027 TP53RKQ96S44 253 aa11.55□□□□□ -0.56
PTPRU-210ENST00000527027 XCL2Q9UBD3 114 aa11.55□□□□□ -0.56
PTPRU-210ENST00000527027 HNRNPCP07910 306 aaKnown RBP eCLIP11.54□□□□□ -0.56
PTPRU-210ENST00000527027 PGAM2P15259 253 aa11.54□□□□□ -0.56
PTPRU-210ENST00000527027 PI3P19957 117 aa11.54□□□□□ -0.56
PTPRU-210ENST00000527027 PIGPP57054 158 aa11.54□□□□□ -0.56
PTPRU-210ENST00000527027 SNRPD3P62318 126 aaKnown RBP11.54□□□□□ -0.56
PTPRU-210ENST00000527027 MEF2DQ14814 521 aa11.54□□□□□ -0.56
PTPRU-210ENST00000527027 BSXQ3C1V8 233 aa11.54□□□□□ -0.56
PTPRU-210ENST00000527027 GLMPQ8WWB7 406 aa11.54□□□□□ -0.56
PTPRU-210ENST00000527027 SEPSECSQ9HD40 501 aaKnown RBP11.54□□□□□ -0.56
PTPRU-210ENST00000527027 ABCA13Q86UQ4 5058 aa11.53□□□□□ -0.56
PTPRU-210ENST00000527027 RPS10-NUDT3A0A1W2PQS6 291 aa11.53□□□□□ -0.56
PTPRU-210ENST00000527027 CENPXA8MT69 81 aa11.53□□□□□ -0.56
PTPRU-210ENST00000527027 H3BMM0 161 aa11.53□□□□□ -0.56
PTPRU-210ENST00000527027 M0QYG6 137 aa11.53□□□□□ -0.56
PTPRU-210ENST00000527027 IFNA10P01566 189 aa11.53□□□□□ -0.56
PTPRU-210ENST00000527027 IFNA21P01568 189 aa11.53□□□□□ -0.56
PTPRU-210ENST00000527027 SPART-AS1P0CW21 52 aa11.53□□□□□ -0.56
PTPRU-210ENST00000527027 RNASE10Q5GAN6 216 aaKnown RBP11.53□□□□□ -0.56
PTPRU-210ENST00000527027 TOMM5Q8N4H5 51 aa11.53□□□□□ -0.56
PTPRU-210ENST00000527027 NEU1Q99519 415 aa11.53□□□□□ -0.56
PTPRU-210ENST00000527027 C7orf50Q9BRJ6 194 aaKnown RBP11.53□□□□□ -0.56
PTPRU-210ENST00000527027 KLK11Q9UBX7 282 aa11.53□□□□□ -0.56
PTPRU-210ENST00000527027 C3orf85A0A1B0GTC6 90 aa11.52□□□□□ -0.57
PTPRU-210ENST00000527027 FAM90A26D6RGX4 464 aa11.52□□□□□ -0.57
PTPRU-210ENST00000527027 IGLC1P0CG04 106 aa11.52□□□□□ -0.57
PTPRU-210ENST00000527027 AKAIN1P0CW23 69 aa11.52□□□□□ -0.57
PTPRU-210ENST00000527027 YPEL3P61236 119 aaPredicted RBP11.52□□□□□ -0.57
PTPRU-210ENST00000527027 DHODHQ02127 395 aa11.52□□□□□ -0.57
PTPRU-210ENST00000527027 TRIM16LQ309B1 348 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms