RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 MYCNOSP40205 109 aa16.33■□□□□ 0.2
SMIM3-201ENST00000526627 SLC35B1P78383 322 aa16.33■□□□□ 0.2
SMIM3-201ENST00000526627 NDUFAF3Q9BU61 184 aa16.33■□□□□ 0.2
SMIM3-201ENST00000526627 NAGKQ9UJ70 344 aa16.33■□□□□ 0.2
SMIM3-201ENST00000526627 RALYQ9UKM9 306 aaKnown RBP16.33■□□□□ 0.2
SMIM3-201ENST00000526627 KALRNO60229 2985 aa16.33■□□□□ 0.2
SMIM3-201ENST00000526627 POLEQ07864 2286 aa16.33■□□□□ 0.2
SMIM3-201ENST00000526627 MOSP00540 346 aa16.33■□□□□ 0.2
SMIM3-201ENST00000526627 LINC00305Q7Z4B0 112 aa16.33■□□□□ 0.2
SMIM3-201ENST00000526627 FAM168AQ92567 244 aa16.33■□□□□ 0.2
SMIM3-201ENST00000526627 TNFRSF14Q92956 283 aa16.33■□□□□ 0.2
SMIM3-201ENST00000526627 VKORC1Q9BQB6 163 aa16.33■□□□□ 0.2
SMIM3-201ENST00000526627 TNFRSF19Q9NS68 423 aa16.33■□□□□ 0.2
SMIM3-201ENST00000526627 K7ENP7 123 aa16.32■□□□□ 0.2
SMIM3-201ENST00000526627 PEX7O00628 323 aa16.32■□□□□ 0.2
SMIM3-201ENST00000526627 CD33P20138 364 aa16.32■□□□□ 0.2
SMIM3-201ENST00000526627 PAFAH1B2P68402 229 aa16.32■□□□□ 0.2
SMIM3-201ENST00000526627 MISP3Q96FF7 219 aa16.32■□□□□ 0.2
SMIM3-201ENST00000526627 TRAV34A0A0B4J273 112 aa16.31■□□□□ 0.2
SMIM3-201ENST00000526627 CA1P00915 261 aaPredicted RBP16.31■□□□□ 0.2
SMIM3-201ENST00000526627 CD3EP07766 207 aa16.31■□□□□ 0.2
SMIM3-201ENST00000526627 RPL27AP46776 148 aaKnown RBP16.31■□□□□ 0.2
SMIM3-201ENST00000526627 TPPP2P59282 170 aa16.31■□□□□ 0.2
SMIM3-201ENST00000526627 NAT8BQ9UHF3 227 aa16.31■□□□□ 0.2
SMIM3-201ENST00000526627 SIGLEC9Q9Y336 463 aa16.31■□□□□ 0.2
SMIM3-201ENST00000526627 MT-ND6P03923 174 aa16.31■□□□□ 0.2
SMIM3-201ENST00000526627 SNRPCP09234 159 aaKnown RBP16.31■□□□□ 0.2
SMIM3-201ENST00000526627 FOXC1Q12948 553 aa16.31■□□□□ 0.2
SMIM3-201ENST00000526627 TNXAQ16473 311 aa16.31■□□□□ 0.2
SMIM3-201ENST00000526627 WDR73Q6P4I2 378 aa16.31■□□□□ 0.2
SMIM3-201ENST00000526627 BEND2Q8NDZ0 799 aa16.31■□□□□ 0.2
SMIM3-201ENST00000526627 MBD6Q96DN6 1003 aa16.31■□□□□ 0.2
SMIM3-201ENST00000526627 GNB4Q9HAV0 340 aa16.31■□□□□ 0.2
SMIM3-201ENST00000526627 IGHV1-3A0A0C4DH29 117 aa16.3■□□□□ 0.2
SMIM3-201ENST00000526627 APELAP0DMC3 54 aa16.3■□□□□ 0.2
SMIM3-201ENST00000526627 ETFRF1Q6IPR1 90 aa16.3■□□□□ 0.2
SMIM3-201ENST00000526627 TRGV9Q99603 122 aa16.3■□□□□ 0.2
SMIM3-201ENST00000526627 MALRD1Q5VYJ5 2156 aa16.3■□□□□ 0.2
SMIM3-201ENST00000526627 COMPP49747 757 aaPredicted RBP16.3■□□□□ 0.2
SMIM3-201ENST00000526627 CASP6P55212 293 aa16.3■□□□□ 0.2
SMIM3-201ENST00000526627 RBPJQ06330 500 aa16.3■□□□□ 0.2
SMIM3-201ENST00000526627 LHFPL4Q7Z7J7 247 aa16.3■□□□□ 0.2
SMIM3-201ENST00000526627 BAGE3Q86Y29 109 aa16.3■□□□□ 0.2
SMIM3-201ENST00000526627 BAGE2Q86Y30 109 aa16.3■□□□□ 0.2
SMIM3-201ENST00000526627 LINC01560Q8TB33 94 aa16.3■□□□□ 0.2
SMIM3-201ENST00000526627 SERTAD4Q9NUC0 356 aa16.3■□□□□ 0.2
SMIM3-201ENST00000526627 MUC6Q6W4X9 2439 aa16.29■□□□□ 0.2
SMIM3-201ENST00000526627 BUB1B-PAK6H3BSN5 160 aa16.29■□□□□ 0.2
SMIM3-201ENST00000526627 SIAH2O43255 324 aa16.29■□□□□ 0.2
SMIM3-201ENST00000526627 ORM2P19652 201 aa16.29■□□□□ 0.2
SMIM3-201ENST00000526627 RANP62826 216 aaKnown RBP16.29■□□□□ 0.2
SMIM3-201ENST00000526627 GNG5P63218 68 aa16.29■□□□□ 0.2
SMIM3-201ENST00000526627 C1orf194Q5T5A4 169 aa16.29■□□□□ 0.2
SMIM3-201ENST00000526627 MRPL54Q6P161 138 aaKnown RBP16.29■□□□□ 0.2
SMIM3-201ENST00000526627 TMEM116Q8NCL8 245 aa16.29■□□□□ 0.2
SMIM3-201ENST00000526627 SPTBN2O15020 2390 aa16.29■□□□□ 0.2
SMIM3-201ENST00000526627 KIR2DL5BA0A0G2JN68 375 aa16.29■□□□□ 0.2
SMIM3-201ENST00000526627 KIR2DL5BA0A0G2JPC4 375 aa16.29■□□□□ 0.2
SMIM3-201ENST00000526627 A0A1B0GV90 55 aa16.29■□□□□ 0.2
SMIM3-201ENST00000526627 IZUMO1RA6ND01 250 aa16.29■□□□□ 0.2
SMIM3-201ENST00000526627 AMY1AP04745 511 aa16.29■□□□□ 0.2
SMIM3-201ENST00000526627 FAM87AP0C7U9 286 aa16.29■□□□□ 0.2
SMIM3-201ENST00000526627 PRRX1P54821 245 aa16.29■□□□□ 0.2
SMIM3-201ENST00000526627 KIAA1644Q3SXP7 199 aa16.29■□□□□ 0.2
SMIM3-201ENST00000526627 FAM231DQ6ZW35 169 aa16.29■□□□□ 0.2
SMIM3-201ENST00000526627 KIR2DL5AQ8N109 375 aa16.29■□□□□ 0.2
SMIM3-201ENST00000526627 OR1B1Q8NGR6 318 aa16.29■□□□□ 0.2
SMIM3-201ENST00000526627 SSBP3Q9BWW4 388 aaPredicted RBP16.29■□□□□ 0.2
SMIM3-201ENST00000526627 C7orf69Q9H7B7 122 aa16.29■□□□□ 0.2
SMIM3-201ENST00000526627 TEX22C9J3V5 150 aa16.28■□□□□ 0.2
SMIM3-201ENST00000526627 RPL19P84098 196 aaKnown RBP16.28■□□□□ 0.2
SMIM3-201ENST00000526627 COX19Q49B96 90 aa16.28■□□□□ 0.2
SMIM3-201ENST00000526627 PERPQ96FX8 193 aa16.28■□□□□ 0.2
SMIM3-201ENST00000526627 HSPB9Q9BQS6 159 aa16.28■□□□□ 0.2
SMIM3-201ENST00000526627 INSIG2Q9Y5U4 225 aa16.28■□□□□ 0.2
SMIM3-201ENST00000526627 IGHV3-21A0A0B4J1V1 117 aa16.28■□□□□ 0.2
SMIM3-201ENST00000526627 BMPR1BO00238 502 aa16.28■□□□□ 0.2
SMIM3-201ENST00000526627 PAX2Q02962 417 aa16.28■□□□□ 0.2
SMIM3-201ENST00000526627 TBX15Q96SF7 602 aa16.28■□□□□ 0.2
SMIM3-201ENST00000526627 CLEC7AQ9BXN2 247 aa16.28■□□□□ 0.2
SMIM3-201ENST00000526627 C2orf88Q9BSF0 95 aa16.27■□□□□ 0.2
SMIM3-201ENST00000526627 DCHS1Q96JQ0 3298 aa16.27■□□□□ 0.2
SMIM3-201ENST00000526627 GRNP28799 593 aaKnown RBP16.27■□□□□ 0.19
SMIM3-201ENST00000526627 TMEM183BQ1AE95 376 aa16.27■□□□□ 0.19
SMIM3-201ENST00000526627 TPTE2P1Q5T6R2 138 aa16.27■□□□□ 0.19
SMIM3-201ENST00000526627 NUDT10Q8NFP7 164 aa16.27■□□□□ 0.19
SMIM3-201ENST00000526627 NUDT11Q96G61 164 aa16.27■□□□□ 0.19
SMIM3-201ENST00000526627 SCNM1Q9BWG6 230 aa16.27■□□□□ 0.19
SMIM3-201ENST00000526627 PPP1R27Q86WC6 154 aa16.26■□□□□ 0.19
SMIM3-201ENST00000526627 STXBP6Q8NFX7 210 aa16.26■□□□□ 0.19
SMIM3-201ENST00000526627 GSX1Q9H4S2 264 aaPredicted RBP16.26■□□□□ 0.19
SMIM3-201ENST00000526627 EPDR1Q9UM22 224 aa16.26■□□□□ 0.19
SMIM3-201ENST00000526627 RNF114Q9Y508 228 aa16.26■□□□□ 0.19
SMIM3-201ENST00000526627 F11RQ9Y624 299 aaKnown RBP16.26■□□□□ 0.19
SMIM3-201ENST00000526627 HLA-DQA1P01909 254 aa16.25■□□□□ 0.19
SMIM3-201ENST00000526627 COX7A1P24310 79 aa16.25■□□□□ 0.19
SMIM3-201ENST00000526627 CDKN1AP38936 164 aa16.25■□□□□ 0.19
SMIM3-201ENST00000526627 OR10J3Q5JRS4 329 aa16.25■□□□□ 0.19
SMIM3-201ENST00000526627 MUC15Q8N387 334 aa16.25■□□□□ 0.19
SMIM3-201ENST00000526627 BLNKQ8WV28 456 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms