RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 HAPLN4Q86UW8 402 aa13.03□□□□□ -0.32
LMX1B-203ENST00000526117 RCL1Q9Y2P8 373 aaKnown RBP13.03□□□□□ -0.32
LMX1B-203ENST00000526117 CCSO14618 274 aa13.02□□□□□ -0.33
LMX1B-203ENST00000526117 SSSCA1O60232 199 aa13.02□□□□□ -0.33
LMX1B-203ENST00000526117 MBPP02686 304 aaPredicted RBP13.02□□□□□ -0.33
LMX1B-203ENST00000526117 PAX9P55771 341 aa13.02□□□□□ -0.33
LMX1B-203ENST00000526117 GAMTQ14353 236 aa13.02□□□□□ -0.33
LMX1B-203ENST00000526117 GSG1LQ6UXU4 331 aa13.02□□□□□ -0.33
LMX1B-203ENST00000526117 NPIPB3Q92617 1050 aa13.02□□□□□ -0.33
LMX1B-203ENST00000526117 SLC35E1Q96K37 410 aa13.02□□□□□ -0.33
LMX1B-203ENST00000526117 GSKIPQ9P0R6 139 aa13.02□□□□□ -0.33
LMX1B-203ENST00000526117 SMPXQ9UHP9 88 aa13.02□□□□□ -0.33
LMX1B-203ENST00000526117 PUS1Q9Y606 427 aaKnown RBP eCLIP13.02□□□□□ -0.33
LMX1B-203ENST00000526117 TRAV14DV4A0A0A6YYC5 116 aa13.01□□□□□ -0.33
LMX1B-203ENST00000526117 IGHV7-4-1A0A0J9YVY3 117 aa13.01□□□□□ -0.33
LMX1B-203ENST00000526117 C7orf66A4D0T2 115 aa13.01□□□□□ -0.33
LMX1B-203ENST00000526117 IZUMO1RA6ND01 250 aa13.01□□□□□ -0.33
LMX1B-203ENST00000526117 C5orf51A6NDU8 294 aa13.01□□□□□ -0.33
LMX1B-203ENST00000526117 ZNF785A8K8V0 405 aa13.01□□□□□ -0.33
LMX1B-203ENST00000526117 A8MZ25 164 aa13.01□□□□□ -0.33
LMX1B-203ENST00000526117 SCAF4O95104 1147 aaKnown RBP13.01□□□□□ -0.33
LMX1B-203ENST00000526117 CD5P06127 495 aa13.01□□□□□ -0.33
LMX1B-203ENST00000526117 SPANXN5Q5MJ07 72 aa13.01□□□□□ -0.33
LMX1B-203ENST00000526117 BTNL8Q6UX41 500 aa13.01□□□□□ -0.33
LMX1B-203ENST00000526117 TMEM14EPQ6UXP3 125 aa13.01□□□□□ -0.33
LMX1B-203ENST00000526117 Q8N1Y9 231 aa13.01□□□□□ -0.33
LMX1B-203ENST00000526117 C20orf24Q9BUV8 137 aa13.01□□□□□ -0.33
LMX1B-203ENST00000526117 PSENENQ9NZ42 101 aa13.01□□□□□ -0.33
LMX1B-203ENST00000526117 SORL1Q92673 2214 aa13□□□□□ -0.33
LMX1B-203ENST00000526117 PMS2P5A8MQ11 134 aa13□□□□□ -0.33
LMX1B-203ENST00000526117 FNDC10F2Z333 226 aa13□□□□□ -0.33
LMX1B-203ENST00000526117 TOMM40O96008 361 aa13□□□□□ -0.33
LMX1B-203ENST00000526117 BMI1P35226 326 aa13□□□□□ -0.33
LMX1B-203ENST00000526117 TIGITQ495A1 244 aa13□□□□□ -0.33
LMX1B-203ENST00000526117 TMEM61Q8N0U2 210 aa13□□□□□ -0.33
LMX1B-203ENST00000526117 THAP8Q8NA92 274 aa13□□□□□ -0.33
LMX1B-203ENST00000526117 ACY3Q96HD9 319 aa13□□□□□ -0.33
LMX1B-203ENST00000526117 C11orf1Q9H5F2 150 aa13□□□□□ -0.33
LMX1B-203ENST00000526117 VSIRQ9H7M9 311 aa13□□□□□ -0.33
LMX1B-203ENST00000526117 FAM25EA8MYX2 175 aa12.99□□□□□ -0.33
LMX1B-203ENST00000526117 K7EPK0 472 aa12.99□□□□□ -0.33
LMX1B-203ENST00000526117 CHEK1O14757 476 aa12.99□□□□□ -0.33
LMX1B-203ENST00000526117 TSPAN4O14817 238 aa12.99□□□□□ -0.33
LMX1B-203ENST00000526117 YIF1AO95070 293 aa12.99□□□□□ -0.33
LMX1B-203ENST00000526117 SCGB1D2O95969 90 aa12.99□□□□□ -0.33
LMX1B-203ENST00000526117 CRYBB3P26998 211 aa12.99□□□□□ -0.33
LMX1B-203ENST00000526117 GTSCR1Q86UQ5 136 aa12.99□□□□□ -0.33
LMX1B-203ENST00000526117 Q8WTZ3 238 aa12.99□□□□□ -0.33
LMX1B-203ENST00000526117 NMES1Q9C002 83 aa12.99□□□□□ -0.33
LMX1B-203ENST00000526117 SMAD5-AS1Q9Y6J3 95 aa12.99□□□□□ -0.33
LMX1B-203ENST00000526117 IGKV1D-37A0A075B6S9 117 aa12.98□□□□□ -0.33
LMX1B-203ENST00000526117 H3BP45 60 aa12.98□□□□□ -0.33
LMX1B-203ENST00000526117 FABP1P07148 127 aa12.98□□□□□ -0.33
LMX1B-203ENST00000526117 LAMTOR1Q6IAA8 161 aa12.98□□□□□ -0.33
LMX1B-203ENST00000526117 TRGV9Q99603 122 aa12.98□□□□□ -0.33
LMX1B-203ENST00000526117 SPAG8Q99932 426 aaPredicted RBP12.98□□□□□ -0.33
LMX1B-203ENST00000526117 B9D2Q9BPU9 175 aa12.98□□□□□ -0.33
LMX1B-203ENST00000526117 RHPN1-AS1Q9BWJ2 59 aa12.98□□□□□ -0.33
LMX1B-203ENST00000526117 IGHV3OR16-8A0A075B7F1 116 aa12.97□□□□□ -0.33
LMX1B-203ENST00000526117 RD3LP0DJH9 198 aa12.97□□□□□ -0.33
LMX1B-203ENST00000526117 NPPCP23582 126 aa12.97□□□□□ -0.33
LMX1B-203ENST00000526117 CYCSP99999 105 aaKnown RBP12.97□□□□□ -0.33
LMX1B-203ENST00000526117 DEFB121Q5J5C9 76 aa12.97□□□□□ -0.33
LMX1B-203ENST00000526117 RBPMS2Q6ZRY4 209 aaKnown RBP12.97□□□□□ -0.33
LMX1B-203ENST00000526117 WDR89Q96FK6 387 aaPredicted RBP12.97□□□□□ -0.33
LMX1B-203ENST00000526117 METTL26Q96S19 204 aa12.97□□□□□ -0.33
LMX1B-203ENST00000526117 GGACTQ9BVM4 153 aa12.97□□□□□ -0.33
LMX1B-203ENST00000526117 TMEM231Q9H6L2 316 aa12.97□□□□□ -0.33
LMX1B-203ENST00000526117 U3KQE9 123 aa12.97□□□□□ -0.33
LMX1B-203ENST00000526117 TGP01266 2768 aa12.96□□□□□ -0.33
LMX1B-203ENST00000526117 IGKV1OR2-108A0A075B7D4 117 aa12.96□□□□□ -0.33
LMX1B-203ENST00000526117 A0A1W2PS18 150 aa12.96□□□□□ -0.33
LMX1B-203ENST00000526117 ZNF207O43670 478 aaKnown RBP12.96□□□□□ -0.33
LMX1B-203ENST00000526117 CFDP00746 253 aaPredicted RBP12.96□□□□□ -0.33
LMX1B-203ENST00000526117 PVALBP20472 110 aaPredicted RBP12.96□□□□□ -0.33
LMX1B-203ENST00000526117 DLK1P80370 383 aa12.96□□□□□ -0.33
LMX1B-203ENST00000526117 FAM90A2PQ658T7 463 aa12.96□□□□□ -0.33
LMX1B-203ENST00000526117 ACOT7LQ6ZUV0 252 aa12.96□□□□□ -0.33
LMX1B-203ENST00000526117 TMEM144Q7Z5S9 345 aa12.96□□□□□ -0.33
LMX1B-203ENST00000526117 OR51G1Q8NGK1 321 aa12.96□□□□□ -0.33
LMX1B-203ENST00000526117 FAM110AQ9BQ89 295 aa12.96□□□□□ -0.33
LMX1B-203ENST00000526117 PAIP2BQ9ULR5 123 aaKnown RBP12.96□□□□□ -0.33
LMX1B-203ENST00000526117 COL7A1Q02388 2944 aa12.95□□□□□ -0.34
LMX1B-203ENST00000526117 ZFP92A6NM28 416 aa12.95□□□□□ -0.34
LMX1B-203ENST00000526117 L7N2F9 121 aa12.95□□□□□ -0.34
LMX1B-203ENST00000526117 PSG1P11464 419 aa12.95□□□□□ -0.34
LMX1B-203ENST00000526117 VAMP2P63027 116 aa12.95□□□□□ -0.34
LMX1B-203ENST00000526117 RAB32Q13637 225 aa12.95□□□□□ -0.34
LMX1B-203ENST00000526117 OR8G2PQ6IF36 304 aa12.95□□□□□ -0.34
LMX1B-203ENST00000526117 OR10P1Q8NGE3 313 aa12.95□□□□□ -0.34
LMX1B-203ENST00000526117 LYRM2Q9NU23 88 aaPredicted RBP12.95□□□□□ -0.34
LMX1B-203ENST00000526117 GOSR2O14653 212 aa12.94□□□□□ -0.34
LMX1B-203ENST00000526117 IL4P05112 153 aa12.94□□□□□ -0.34
LMX1B-203ENST00000526117 METTL15P1P0C7V9 234 aa12.94□□□□□ -0.34
LMX1B-203ENST00000526117 NUP62P37198 522 aaPredicted RBP12.94□□□□□ -0.34
LMX1B-203ENST00000526117 GUCA2BQ16661 112 aa12.94□□□□□ -0.34
LMX1B-203ENST00000526117 NARS2Q96I59 477 aaKnown RBP12.94□□□□□ -0.34
LMX1B-203ENST00000526117 RNF2Q99496 336 aa12.94□□□□□ -0.34
LMX1B-203ENST00000526117 NEURL2Q9BR09 285 aa12.94□□□□□ -0.34
LMX1B-203ENST00000526117 C19orf73Q9NVV2 129 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms