RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 AKR1C3P42330 323 aa2.76□□□□□ -1.97
USP47-206ENST00000525367 FXYD2P54710 66 aa2.76□□□□□ -1.97
USP47-206ENST00000525367 LINC00315P59091 139 aa2.76□□□□□ -1.97
USP47-206ENST00000525367 SUPT4H1P63272 117 aaKnown RBP2.76□□□□□ -1.97
USP47-206ENST00000525367 PSPHP78330 225 aa2.76□□□□□ -1.97
USP47-206ENST00000525367 EIF3IQ13347 325 aaKnown RBP2.76□□□□□ -1.97
USP47-206ENST00000525367 OR8B8Q15620 311 aa2.76□□□□□ -1.97
USP47-206ENST00000525367 PFN4Q8NHR9 129 aa2.76□□□□□ -1.97
USP47-206ENST00000525367 DCANP1Q8TF63 244 aa2.76□□□□□ -1.97
USP47-206ENST00000525367 TRAPPC2LQ9UL33 140 aa2.76□□□□□ -1.97
USP47-206ENST00000525367 HHLA3Q9XRX5 114 aa2.76□□□□□ -1.97
USP47-206ENST00000525367 KIF13BQ9NQT8 1826 aa2.76□□□□□ -1.97
USP47-206ENST00000525367 BCL9O00512 1426 aa2.76□□□□□ -1.97
USP47-206ENST00000525367 SCN4AP35499 1836 aa2.75□□□□□ -1.97
USP47-206ENST00000525367 IGKV1-9A0A0C4DH69 117 aa2.75□□□□□ -1.97
USP47-206ENST00000525367 TMEM189A5PLL7 270 aa2.75□□□□□ -1.97
USP47-206ENST00000525367 MEIS3P1A6NDR6 274 aa2.75□□□□□ -1.97
USP47-206ENST00000525367 G3V3Q6 166 aa2.75□□□□□ -1.97
USP47-206ENST00000525367 TMEM256-PLSCR3K7ERE1 68 aa2.75□□□□□ -1.97
USP47-206ENST00000525367 OVOL1O14753 267 aa2.75□□□□□ -1.97
USP47-206ENST00000525367 CST7O76096 145 aa2.75□□□□□ -1.97
USP47-206ENST00000525367 IGKV1-16P04430 117 aa2.75□□□□□ -1.97
USP47-206ENST00000525367 IGKV3-11P04433 115 aa2.75□□□□□ -1.97
USP47-206ENST00000525367 GPX2P18283 190 aa2.75□□□□□ -1.97
USP47-206ENST00000525367 RPS3P23396 243 aaKnown RBP eCLIP2.75□□□□□ -1.97
USP47-206ENST00000525367 INSL3P51460 131 aa2.75□□□□□ -1.97
USP47-206ENST00000525367 NDUFA6P56556 154 aa2.75□□□□□ -1.97
USP47-206ENST00000525367 MYL5Q02045 173 aa2.75□□□□□ -1.97
USP47-206ENST00000525367 FOXF1Q12946 379 aa2.75□□□□□ -1.97
USP47-206ENST00000525367 SMIM21Q3B7S5 101 aa2.75□□□□□ -1.97
USP47-206ENST00000525367 C22orf39Q6P5X5 142 aa2.75□□□□□ -1.97
USP47-206ENST00000525367 PRR15Q8IV56 129 aa2.75□□□□□ -1.97
USP47-206ENST00000525367 TMEM229BQ8NBD8 167 aa2.75□□□□□ -1.97
USP47-206ENST00000525367 OR4C16Q8NGL9 310 aa2.75□□□□□ -1.97
USP47-206ENST00000525367 MRPS24Q96EL2 167 aaKnown RBP2.75□□□□□ -1.97
USP47-206ENST00000525367 ZNF471Q9BX82 626 aaPredicted RBP2.75□□□□□ -1.97
USP47-206ENST00000525367 MRPL32Q9BYC8 188 aaKnown RBP2.75□□□□□ -1.97
USP47-206ENST00000525367 TCEAL2Q9H3H9 227 aaPredicted RBP2.75□□□□□ -1.97
USP47-206ENST00000525367 PRO0461Q9UI25 63 aa2.75□□□□□ -1.97
USP47-206ENST00000525367 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.75□□□□□ -1.97
USP47-206ENST00000525367 TECPR2O15040 1411 aa2.75□□□□□ -1.97
USP47-206ENST00000525367 REREQ9P2R6 1566 aa2.74□□□□□ -1.97
USP47-206ENST00000525367 ARAP1Q96P48 1450 aa2.74□□□□□ -1.97
USP47-206ENST00000525367 TRBV10-2A0A0K0K1G8 114 aa2.74□□□□□ -1.97
USP47-206ENST00000525367 C7orf71A4D174 169 aa2.74□□□□□ -1.97
USP47-206ENST00000525367 ARRDC5A6NEK1 342 aa2.74□□□□□ -1.97
USP47-206ENST00000525367 CMPK1P30085 196 aa2.74□□□□□ -1.97
USP47-206ENST00000525367 PSG9Q00887 426 aa2.74□□□□□ -1.97
USP47-206ENST00000525367 NDUFA5Q16718 116 aa2.74□□□□□ -1.97
USP47-206ENST00000525367 EIF5AL1Q6IS14 154 aaKnown RBP2.74□□□□□ -1.97
USP47-206ENST00000525367 HRCT1Q6UXD1 115 aa2.74□□□□□ -1.97
USP47-206ENST00000525367 OR8I2Q8N0Y5 310 aa2.74□□□□□ -1.97
USP47-206ENST00000525367 CARD19Q96LW7 228 aa2.74□□□□□ -1.97
USP47-206ENST00000525367 ADAT1Q9BUB4 502 aaKnown RBP2.74□□□□□ -1.97
USP47-206ENST00000525367 POPDC3Q9HBV1 291 aa2.74□□□□□ -1.97
USP47-206ENST00000525367 TOPBP1Q92547 1522 aa2.73□□□□□ -1.97
USP47-206ENST00000525367 DOCK6Q96HP0 2047 aa2.73□□□□□ -1.97
USP47-206ENST00000525367 CAMSAP2Q08AD1 1489 aa2.73□□□□□ -1.97
USP47-206ENST00000525367 ZNF638Q14966 1978 aaKnown RBP2.73□□□□□ -1.97
USP47-206ENST00000525367 IGHV3-64A0A075B6Q5 118 aa2.73□□□□□ -1.97
USP47-206ENST00000525367 C3orf84H3BNL1 204 aa2.73□□□□□ -1.97
USP47-206ENST00000525367 LYZL6O75951 148 aa2.73□□□□□ -1.97
USP47-206ENST00000525367 HTR1AP08908 422 aa2.73□□□□□ -1.97
USP47-206ENST00000525367 COX4I1P13073 169 aa2.73□□□□□ -1.97
USP47-206ENST00000525367 RNASE4P34096 147 aaKnown RBP2.73□□□□□ -1.97
USP47-206ENST00000525367 DYNLT3P51808 116 aa2.73□□□□□ -1.97
USP47-206ENST00000525367 RHOGP84095 191 aa2.73□□□□□ -1.97
USP47-206ENST00000525367 Q8NDZ9 215 aa2.73□□□□□ -1.97
USP47-206ENST00000525367 OR4E2Q8NGC2 313 aa2.73□□□□□ -1.97
USP47-206ENST00000525367 OR2T10Q8NGZ9 312 aa2.73□□□□□ -1.97
USP47-206ENST00000525367 DEDD2Q8WXF8 326 aa2.73□□□□□ -1.97
USP47-206ENST00000525367 PFDN5Q99471 154 aa2.73□□□□□ -1.97
USP47-206ENST00000525367 OR2H1Q9GZK4 316 aa2.73□□□□□ -1.97
USP47-206ENST00000525367 CACYBPQ9HB71 228 aaKnown RBP2.73□□□□□ -1.97
USP47-206ENST00000525367 NHP2Q9NX24 153 aaKnown RBP2.73□□□□□ -1.97
USP47-206ENST00000525367 COPZ2Q9P299 210 aa2.73□□□□□ -1.97
USP47-206ENST00000525367 NAT8BQ9UHF3 227 aa2.73□□□□□ -1.97
USP47-206ENST00000525367 PAIP2BQ9ULR5 123 aaKnown RBP2.73□□□□□ -1.97
USP47-206ENST00000525367 SIPA1L1O43166 1804 aa2.72□□□□□ -1.97
USP47-206ENST00000525367 TRAV5A0A0B4J249 113 aa2.72□□□□□ -1.97
USP47-206ENST00000525367 IGHV1-18A0A0C4DH31 117 aa2.72□□□□□ -1.97
USP47-206ENST00000525367 GABARAPH6UMI1 98 aa2.72□□□□□ -1.97
USP47-206ENST00000525367 H7BYZ3 331 aa2.72□□□□□ -1.97
USP47-206ENST00000525367 RTL8CO15255 209 aa2.72□□□□□ -1.97
USP47-206ENST00000525367 NDUFB3O43676 98 aa2.72□□□□□ -1.97
USP47-206ENST00000525367 METTL15P1P0C7V9 234 aa2.72□□□□□ -1.97
USP47-206ENST00000525367 COX6A1P12074 109 aa2.72□□□□□ -1.97
USP47-206ENST00000525367 FKBP2P26885 142 aaKnown RBP2.72□□□□□ -1.97
USP47-206ENST00000525367 SDC2P34741 201 aa2.72□□□□□ -1.97
USP47-206ENST00000525367 TMBIM6P55061 237 aa2.72□□□□□ -1.97
USP47-206ENST00000525367 WFDC11Q8NEX6 87 aa2.72□□□□□ -1.97
USP47-206ENST00000525367 LXNQ9BS40 222 aa2.72□□□□□ -1.97
USP47-206ENST00000525367 PRADC1Q9BSG0 188 aa2.72□□□□□ -1.97
USP47-206ENST00000525367 NPCDR1Q9BY65 106 aa2.72□□□□□ -1.97
USP47-206ENST00000525367 TRPM3Q9HCF6 1732 aaPredicted RBP2.72□□□□□ -1.97
USP47-206ENST00000525367 OTORQ9NRC9 128 aa2.72□□□□□ -1.97
USP47-206ENST00000525367 NDUFB11Q9NX14 153 aa2.72□□□□□ -1.97
USP47-206ENST00000525367 MARCOQ9UEW3 520 aaPredicted RBP2.72□□□□□ -1.97
USP47-206ENST00000525367 PSORS1C2Q9UIG4 136 aa2.72□□□□□ -1.97
USP47-206ENST00000525367 HSPB8Q9UJY1 196 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms