RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 GON7Q9BXV9 100 aa4.95□□□□□ -1.62
CD44-214ENST00000525211 HIPK2Q9H2X6 1198 aa4.95□□□□□ -1.62
CD44-214ENST00000525211 SLA2Q9H6Q3 261 aa4.95□□□□□ -1.62
CD44-214ENST00000525211 C21orf62Q9NYP8 219 aa4.95□□□□□ -1.62
CD44-214ENST00000525211 PEF1Q9UBV8 284 aaKnown RBP4.95□□□□□ -1.62
CD44-214ENST00000525211 STRAPQ9Y3F4 350 aaKnown RBP4.95□□□□□ -1.62
CD44-214ENST00000525211 U3KQ87 197 aa4.95□□□□□ -1.62
CD44-214ENST00000525211 LINC01619G3V211 115 aa4.94□□□□□ -1.62
CD44-214ENST00000525211 TGOLN2O43493 480 aa4.94□□□□□ -1.62
CD44-214ENST00000525211 TSC22D2O75157 780 aa4.94□□□□□ -1.62
CD44-214ENST00000525211 APOHP02749 345 aaPredicted RBP4.94□□□□□ -1.62
CD44-214ENST00000525211 HSPB1P04792 205 aaKnown RBP4.94□□□□□ -1.62
CD44-214ENST00000525211 OR8U8P0C7N1 319 aa4.94□□□□□ -1.62
CD44-214ENST00000525211 IGLC1P0CG04 106 aa4.94□□□□□ -1.62
CD44-214ENST00000525211 HIST1H1BP16401 226 aaKnown RBP4.94□□□□□ -1.62
CD44-214ENST00000525211 HOXD3P31249 432 aaPredicted RBP4.94□□□□□ -1.62
CD44-214ENST00000525211 CAV2P51636 162 aa4.94□□□□□ -1.62
CD44-214ENST00000525211 MFAP4P55083 255 aa4.94□□□□□ -1.62
CD44-214ENST00000525211 SYNJ2BPP57105 145 aa4.94□□□□□ -1.62
CD44-214ENST00000525211 TAS2R30P59541 319 aa4.94□□□□□ -1.62
CD44-214ENST00000525211 EWSR1Q01844 656 aaKnown RBP eCLIP4.94□□□□□ -1.62
CD44-214ENST00000525211 ZNF90Q03938 601 aa4.94□□□□□ -1.62
CD44-214ENST00000525211 KLF5Q13887 457 aaPredicted RBP4.94□□□□□ -1.62
CD44-214ENST00000525211 Q56UQ5 140 aa4.94□□□□□ -1.62
CD44-214ENST00000525211 TMEM217Q8N7C4 229 aa4.94□□□□□ -1.62
CD44-214ENST00000525211 OR2T35Q8NGX2 323 aa4.94□□□□□ -1.62
CD44-214ENST00000525211 OR4X1Q8NH49 305 aa4.94□□□□□ -1.62
CD44-214ENST00000525211 RNASEH2CQ8TDP1 164 aaKnown RBP4.94□□□□□ -1.62
CD44-214ENST00000525211 CACNG8Q8WXS5 425 aa4.94□□□□□ -1.62
CD44-214ENST00000525211 EEF1AKMT3Q96AZ1 226 aa4.94□□□□□ -1.62
CD44-214ENST00000525211 USMG5Q96IX5 58 aa4.94□□□□□ -1.62
CD44-214ENST00000525211 RAB40CQ96S21 281 aa4.94□□□□□ -1.62
CD44-214ENST00000525211 NEURL2Q9BR09 285 aa4.94□□□□□ -1.62
CD44-214ENST00000525211 SMIM3Q9BZL3 60 aa4.94□□□□□ -1.62
CD44-214ENST00000525211 LYRM2Q9NU23 88 aaPredicted RBP4.94□□□□□ -1.62
CD44-214ENST00000525211 DNAH3Q8TD57 4116 aa4.94□□□□□ -1.62
CD44-214ENST00000525211 PKD1L1Q8TDX9 2849 aa4.93□□□□□ -1.62
CD44-214ENST00000525211 FXYD6-FXYD2A0A087WZ82 144 aa4.93□□□□□ -1.62
CD44-214ENST00000525211 IGHV3-49A0A0A0MS15 119 aa4.93□□□□□ -1.62
CD44-214ENST00000525211 TRBV7-1A0A0A6YYK4 115 aa4.93□□□□□ -1.62
CD44-214ENST00000525211 A0A0G2JLM5 398 aa4.93□□□□□ -1.62
CD44-214ENST00000525211 ZNF561-AS1K7EIQ3 104 aa4.93□□□□□ -1.62
CD44-214ENST00000525211 L7N2F9 121 aa4.93□□□□□ -1.62
CD44-214ENST00000525211 CLN5O75503 358 aa4.93□□□□□ -1.62
CD44-214ENST00000525211 SLC25A4P12235 298 aa4.93□□□□□ -1.62
CD44-214ENST00000525211 IGLL1P15814 213 aa4.93□□□□□ -1.62
CD44-214ENST00000525211 CXCL2P19875 107 aa4.93□□□□□ -1.62
CD44-214ENST00000525211 ARL3P36405 182 aa4.93□□□□□ -1.62
CD44-214ENST00000525211 MYCNOSP40205 109 aa4.93□□□□□ -1.62
CD44-214ENST00000525211 P2RY1P47900 373 aa4.93□□□□□ -1.62
CD44-214ENST00000525211 RAP2BP61225 183 aa4.93□□□□□ -1.62
CD44-214ENST00000525211 VAMP2P63027 116 aa4.93□□□□□ -1.62
CD44-214ENST00000525211 SLC38A11Q08AI6 406 aa4.93□□□□□ -1.62
CD44-214ENST00000525211 ZNF616Q08AN1 781 aa4.93□□□□□ -1.62
CD44-214ENST00000525211 OR2F1Q13607 317 aa4.93□□□□□ -1.62
CD44-214ENST00000525211 CLINT1Q14677 625 aa4.93□□□□□ -1.62
CD44-214ENST00000525211 THAP8Q8NA92 274 aa4.93□□□□□ -1.62
CD44-214ENST00000525211 TMEM116Q8NCL8 245 aa4.93□□□□□ -1.62
CD44-214ENST00000525211 CIB3Q96Q77 187 aaPredicted RBP4.93□□□□□ -1.62
CD44-214ENST00000525211 HSPB11Q9Y547 144 aa4.93□□□□□ -1.62
CD44-214ENST00000525211 IGHV3OR16-13A0A075B7E8 117 aa4.92□□□□□ -1.62
CD44-214ENST00000525211 IGHV3-74A0A0B4J1X5 117 aa4.92□□□□□ -1.62
CD44-214ENST00000525211 PIGBOS1A0A0B4J2F0 54 aa4.92□□□□□ -1.62
CD44-214ENST00000525211 TMEM213A2RRL7 107 aa4.92□□□□□ -1.62
CD44-214ENST00000525211 IZUMO1RA6ND01 250 aa4.92□□□□□ -1.62
CD44-214ENST00000525211 E5RGE8 158 aa4.92□□□□□ -1.62
CD44-214ENST00000525211 GGCTO75223 188 aaKnown RBP4.92□□□□□ -1.62
CD44-214ENST00000525211 EIF3GO75821 320 aaKnown RBP eCLIP4.92□□□□□ -1.62
CD44-214ENST00000525211 CSN3P07498 182 aa4.92□□□□□ -1.62
CD44-214ENST00000525211 LINC00869P0C866 280 aa4.92□□□□□ -1.62
CD44-214ENST00000525211 RPL12P30050 165 aaKnown RBP4.92□□□□□ -1.62
CD44-214ENST00000525211 OR10J1P30954 320 aa4.92□□□□□ -1.62
CD44-214ENST00000525211 FCGR2BP31994 310 aaPredicted RBP4.92□□□□□ -1.62
CD44-214ENST00000525211 GPX4P36969 197 aaPredicted RBP4.92□□□□□ -1.62
CD44-214ENST00000525211 NKX2-5P52952 324 aaPredicted RBP4.92□□□□□ -1.62
CD44-214ENST00000525211 SUB1P53999 127 aaKnown RBP eCLIP4.92□□□□□ -1.62
CD44-214ENST00000525211 DLK1P80370 383 aa4.92□□□□□ -1.62
CD44-214ENST00000525211 CYCSP99999 105 aaKnown RBP4.92□□□□□ -1.62
CD44-214ENST00000525211 USF2Q15853 346 aaPredicted RBP4.92□□□□□ -1.62
CD44-214ENST00000525211 VWC2Q2TAL6 325 aa4.92□□□□□ -1.62
CD44-214ENST00000525211 TOMM20LQ6UXN7 152 aa4.92□□□□□ -1.62
CD44-214ENST00000525211 C1QL4Q86Z23 238 aa4.92□□□□□ -1.62
CD44-214ENST00000525211 THAP6Q8TBB0 222 aa4.92□□□□□ -1.62
CD44-214ENST00000525211 DPF1Q92782 380 aa4.92□□□□□ -1.62
CD44-214ENST00000525211 CXorf58Q96LI9 332 aa4.92□□□□□ -1.62
CD44-214ENST00000525211 MGST2Q99735 147 aa4.92□□□□□ -1.62
CD44-214ENST00000525211 CYTL1Q9NRR1 136 aa4.92□□□□□ -1.62
CD44-214ENST00000525211 TNFSF18Q9UNG2 199 aa4.92□□□□□ -1.62
CD44-214ENST00000525211 LSM4Q9Y4Z0 139 aaKnown RBP4.92□□□□□ -1.62
CD44-214ENST00000525211 PUS1Q9Y606 427 aaKnown RBP eCLIP4.92□□□□□ -1.62
CD44-214ENST00000525211 IGHV3-66A0A0C4DH42 116 aa4.91□□□□□ -1.62
CD44-214ENST00000525211 WI2-2373I1.2A0A1W2PRP0 233 aa4.91□□□□□ -1.62
CD44-214ENST00000525211 SMCO3A2RU48 225 aa4.91□□□□□ -1.62
CD44-214ENST00000525211 G3V4G9 280 aa4.91□□□□□ -1.62
CD44-214ENST00000525211 GNG7O60262 68 aa4.91□□□□□ -1.62
CD44-214ENST00000525211 SCAF4O95104 1147 aaKnown RBP4.91□□□□□ -1.62
CD44-214ENST00000525211 RLN2P04090 185 aa4.91□□□□□ -1.62
CD44-214ENST00000525211 PSG1P11464 419 aa4.91□□□□□ -1.62
CD44-214ENST00000525211 SULT1A1P50225 295 aa4.91□□□□□ -1.62
CD44-214ENST00000525211 AP2S1P53680 142 aaPredicted RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms