RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 MYH10P35580 1976 aa3.42□□□□□ -1.86
USP47-204ENST00000525078 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.41□□□□□ -1.86
USP47-204ENST00000525078 WDR7Q9Y4E6 1490 aa3.41□□□□□ -1.86
USP47-204ENST00000525078 TRAV5A0A0B4J249 113 aa3.41□□□□□ -1.86
USP47-204ENST00000525078 MDFIC2A0A1B0GVS7 189 aa3.41□□□□□ -1.86
USP47-204ENST00000525078 ODAMA1E959 279 aa3.41□□□□□ -1.86
USP47-204ENST00000525078 M0R378 163 aa3.41□□□□□ -1.86
USP47-204ENST00000525078 CREBL2O60519 120 aaPredicted RBP3.41□□□□□ -1.86
USP47-204ENST00000525078 LYZL6O75951 148 aa3.41□□□□□ -1.86
USP47-204ENST00000525078 OR2H2O95918 312 aa3.41□□□□□ -1.86
USP47-204ENST00000525078 FKBP2P26885 142 aaKnown RBP3.41□□□□□ -1.86
USP47-204ENST00000525078 EVX1P49640 407 aa3.41□□□□□ -1.86
USP47-204ENST00000525078 EIF2B2P49770 351 aaKnown RBP3.41□□□□□ -1.86
USP47-204ENST00000525078 UBE2BP63146 152 aa3.41□□□□□ -1.86
USP47-204ENST00000525078 SLC38A11Q08AI6 406 aa3.41□□□□□ -1.86
USP47-204ENST00000525078 ZNF141Q15928 474 aa3.41□□□□□ -1.86
USP47-204ENST00000525078 FAM229BQ4G0N7 80 aa3.41□□□□□ -1.86
USP47-204ENST00000525078 ZNF660Q6AZW8 331 aaPredicted RBP3.41□□□□□ -1.86
USP47-204ENST00000525078 NOXRED1Q6NXP6 359 aa3.41□□□□□ -1.86
USP47-204ENST00000525078 ZNF880Q6PDB4 577 aa3.41□□□□□ -1.86
USP47-204ENST00000525078 C2orf91Q6ZV80 131 aa3.41□□□□□ -1.86
USP47-204ENST00000525078 MIR17HGQ75NE6 70 aa3.41□□□□□ -1.86
USP47-204ENST00000525078 PRR15Q8IV56 129 aa3.41□□□□□ -1.86
USP47-204ENST00000525078 LYG1Q8N1E2 194 aa3.41□□□□□ -1.86
USP47-204ENST00000525078 OR2T10Q8NGZ9 312 aa3.41□□□□□ -1.86
USP47-204ENST00000525078 TERB2Q8NHR7 220 aa3.41□□□□□ -1.86
USP47-204ENST00000525078 SCGB3A1Q96QR1 104 aa3.41□□□□□ -1.86
USP47-204ENST00000525078 SMIM3Q9BZL3 60 aa3.41□□□□□ -1.86
USP47-204ENST00000525078 C16orf95Q9H693 158 aa3.41□□□□□ -1.86
USP47-204ENST00000525078 NAT8Q9UHE5 227 aa3.41□□□□□ -1.86
USP47-204ENST00000525078 NAT8BQ9UHF3 227 aa3.41□□□□□ -1.86
USP47-204ENST00000525078 ZNF443Q9Y2A4 671 aaPredicted RBP3.41□□□□□ -1.86
USP47-204ENST00000525078 U3KQ87 197 aa3.41□□□□□ -1.86
USP47-204ENST00000525078 CABIN1Q9Y6J0 2220 aa3.41□□□□□ -1.86
USP47-204ENST00000525078 TAF1LQ8IZX4 1826 aa3.41□□□□□ -1.86
USP47-204ENST00000525078 ZNF638Q14966 1978 aaKnown RBP3.41□□□□□ -1.86
USP47-204ENST00000525078 ARHGEF5Q12774 1597 aa3.41□□□□□ -1.86
USP47-204ENST00000525078 IQGAP1P46940 1657 aa3.4□□□□□ -1.86
USP47-204ENST00000525078 IGKV3D-20A0A0C4DH25 116 aa3.4□□□□□ -1.87
USP47-204ENST00000525078 OVOS2A0A0G2JMS6 1433 aa3.4□□□□□ -1.87
USP47-204ENST00000525078 C16orf90A8MZG2 172 aa3.4□□□□□ -1.87
USP47-204ENST00000525078 LINC00587B1AMM8 73 aa3.4□□□□□ -1.87
USP47-204ENST00000525078 TMEM256-PLSCR3K7ERE1 68 aa3.4□□□□□ -1.87
USP47-204ENST00000525078 M0R2Z0 102 aa3.4□□□□□ -1.87
USP47-204ENST00000525078 UNC13BO14795 1591 aa3.4□□□□□ -1.87
USP47-204ENST00000525078 TPST1O60507 370 aa3.4□□□□□ -1.87
USP47-204ENST00000525078 CST7O76096 145 aa3.4□□□□□ -1.87
USP47-204ENST00000525078 DPM2O94777 84 aa3.4□□□□□ -1.87
USP47-204ENST00000525078 XCL1P47992 114 aa3.4□□□□□ -1.87
USP47-204ENST00000525078 NDUFA6P56556 154 aa3.4□□□□□ -1.87
USP47-204ENST00000525078 RHOGP84095 191 aa3.4□□□□□ -1.87
USP47-204ENST00000525078 ZNF117Q03924 483 aa3.4□□□□□ -1.87
USP47-204ENST00000525078 NDUFA5Q16718 116 aa3.4□□□□□ -1.87
USP47-204ENST00000525078 RPP25LQ8N5L8 163 aaKnown RBP3.4□□□□□ -1.87
USP47-204ENST00000525078 MUC7Q8TAX7 377 aa3.4□□□□□ -1.87
USP47-204ENST00000525078 WFDC5Q8TCV5 224 aa3.4□□□□□ -1.87
USP47-204ENST00000525078 FGF13Q92913 245 aa3.4□□□□□ -1.87
USP47-204ENST00000525078 AP1S3Q96PC3 154 aa3.4□□□□□ -1.87
USP47-204ENST00000525078 YPEL2Q96QA6 119 aa3.4□□□□□ -1.87
USP47-204ENST00000525078 TMEM133Q9H2Q1 129 aa3.4□□□□□ -1.87
USP47-204ENST00000525078 ZNF106Q9H2Y7 1883 aaKnown RBP3.4□□□□□ -1.87
USP47-204ENST00000525078 OTORQ9NRC9 128 aa3.4□□□□□ -1.87
USP47-204ENST00000525078 S4R3C0 116 aa3.4□□□□□ -1.87
USP47-204ENST00000525078 PLXND1Q9Y4D7 1925 aa3.4□□□□□ -1.87
USP47-204ENST00000525078 SIPA1L1O43166 1804 aa3.4□□□□□ -1.87
USP47-204ENST00000525078 TOPBP1Q92547 1522 aa3.39□□□□□ -1.87
USP47-204ENST00000525078 KIAA0586Q9BVV6 1533 aa3.39□□□□□ -1.87
USP47-204ENST00000525078 MED23Q9ULK4 1368 aa3.39□□□□□ -1.87
USP47-204ENST00000525078 CDC42BPAQ5VT25 1732 aa3.39□□□□□ -1.87
USP47-204ENST00000525078 MYO5CQ9NQX4 1742 aa3.39□□□□□ -1.87
USP47-204ENST00000525078 MAST1Q9Y2H9 1570 aa3.39□□□□□ -1.87
USP47-204ENST00000525078 RTEL1-TNFRSF6BF6WH68 1400 aa3.39□□□□□ -1.87
USP47-204ENST00000525078 CD109Q6YHK3 1445 aa3.39□□□□□ -1.87
USP47-204ENST00000525078 IGLV3-16A0A075B6K0 115 aa3.39□□□□□ -1.87
USP47-204ENST00000525078 A0A0J9YW62 118 aa3.39□□□□□ -1.87
USP47-204ENST00000525078 A0A1W2PQD3 144 aa3.39□□□□□ -1.87
USP47-204ENST00000525078 TMEM212A6NML5 194 aa3.39□□□□□ -1.87
USP47-204ENST00000525078 H3BT86 120 aa3.39□□□□□ -1.87
USP47-204ENST00000525078 SCTP09683 121 aa3.39□□□□□ -1.87
USP47-204ENST00000525078 UCHL1P09936 223 aa3.39□□□□□ -1.87
USP47-204ENST00000525078 PSMB8P28062 276 aa3.39□□□□□ -1.87
USP47-204ENST00000525078 SDC2P34741 201 aa3.39□□□□□ -1.87
USP47-204ENST00000525078 HIST1H1AQ02539 215 aaPredicted RBP3.39□□□□□ -1.87
USP47-204ENST00000525078 MSMO1Q15800 293 aa3.39□□□□□ -1.87
USP47-204ENST00000525078 WHAMMP3Q1A5X7 153 aa3.39□□□□□ -1.87
USP47-204ENST00000525078 VMA21Q3ZAQ7 101 aa3.39□□□□□ -1.87
USP47-204ENST00000525078 MORN2Q502X0 79 aa3.39□□□□□ -1.87
USP47-204ENST00000525078 OR10P1Q8NGE3 313 aa3.39□□□□□ -1.87
USP47-204ENST00000525078 IMMP2LQ96T52 175 aa3.39□□□□□ -1.87
USP47-204ENST00000525078 HIST1H2BLQ99880 126 aa3.39□□□□□ -1.87
USP47-204ENST00000525078 LXNQ9BS40 222 aa3.39□□□□□ -1.87
USP47-204ENST00000525078 TCEAL2Q9H3H9 227 aaPredicted RBP3.39□□□□□ -1.87
USP47-204ENST00000525078 RBM7Q9Y580 266 aaKnown RBP3.39□□□□□ -1.87
USP47-204ENST00000525078 USP32Q8NFA0 1604 aa3.39□□□□□ -1.87
USP47-204ENST00000525078 NKTRP30414 1462 aaKnown RBP3.39□□□□□ -1.87
USP47-204ENST00000525078 GRIN2AQ12879 1464 aa3.39□□□□□ -1.87
USP47-204ENST00000525078 CCDC141Q6ZP82 1450 aa3.39□□□□□ -1.87
USP47-204ENST00000525078 PCM1Q15154 2024 aa3.39□□□□□ -1.87
USP47-204ENST00000525078 MYOM1P52179 1685 aa3.39□□□□□ -1.87
USP47-204ENST00000525078 CDK13Q14004 1512 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms