RNA–Protein interactions for RNA: ENST00000524827.5

CSTF3-206, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3 BASIC

Gene CSTF3, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-206ENST00000524827 TP53RKQ96S44 253 aa9.84□□□□□ -0.83
CSTF3-206ENST00000524827 SEPSECSQ9HD40 501 aaKnown RBP9.84□□□□□ -0.83
CSTF3-206ENST00000524827 ENY2Q9NPA8 101 aa9.84□□□□□ -0.83
CSTF3-206ENST00000524827 NRN1Q9NPD7 142 aa9.84□□□□□ -0.83
CSTF3-206ENST00000524827 DKK2Q9UBU2 259 aa9.84□□□□□ -0.83
CSTF3-206ENST00000524827 HLA-DRB4X5D2U9 266 aa9.84□□□□□ -0.83
CSTF3-206ENST00000524827 IGHV3OR16-12A0A075B7B8 117 aa9.83□□□□□ -0.84
CSTF3-206ENST00000524827 SMIM9A6NGZ8 99 aa9.83□□□□□ -0.84
CSTF3-206ENST00000524827 CDK2AP2O75956 126 aa9.83□□□□□ -0.84
CSTF3-206ENST00000524827 HTN3P15516 51 aa9.83□□□□□ -0.84
CSTF3-206ENST00000524827 PI3P19957 117 aa9.83□□□□□ -0.84
CSTF3-206ENST00000524827 RND3P61587 244 aa9.83□□□□□ -0.84
CSTF3-206ENST00000524827 DHODHQ02127 395 aa9.83□□□□□ -0.84
CSTF3-206ENST00000524827 USF2Q15853 346 aaPredicted RBP9.83□□□□□ -0.84
CSTF3-206ENST00000524827 FAM222AQ5U5X8 452 aa9.83□□□□□ -0.84
CSTF3-206ENST00000524827 CROCCP3Q8IVE0 287 aa9.83□□□□□ -0.84
CSTF3-206ENST00000524827 OR1S2Q8NGQ3 325 aa9.83□□□□□ -0.84
CSTF3-206ENST00000524827 Q8WTZ3 238 aa9.83□□□□□ -0.84
CSTF3-206ENST00000524827 NIPSNAP3BQ9BS92 247 aa9.83□□□□□ -0.84
CSTF3-206ENST00000524827 RFNGQ9Y644 331 aa9.83□□□□□ -0.84
CSTF3-206ENST00000524827 A0A0G2JRQ6 117 aa9.82□□□□□ -0.84
CSTF3-206ENST00000524827 TEX48A0A1B0GUV7 120 aa9.82□□□□□ -0.84
CSTF3-206ENST00000524827 RPS10-NUDT3A0A1W2PQS6 291 aa9.82□□□□□ -0.84
CSTF3-206ENST00000524827 C16orf90A8MZG2 172 aa9.82□□□□□ -0.84
CSTF3-206ENST00000524827 IGKV3-20P01619 116 aa9.82□□□□□ -0.84
CSTF3-206ENST00000524827 PGAM2P15259 253 aa9.82□□□□□ -0.84
CSTF3-206ENST00000524827 RCVRNP35243 200 aa9.82□□□□□ -0.84
CSTF3-206ENST00000524827 RND2P52198 227 aa9.82□□□□□ -0.84
CSTF3-206ENST00000524827 FXYD7P58549 80 aa9.82□□□□□ -0.84
CSTF3-206ENST00000524827 DEFB1P60022 68 aa9.82□□□□□ -0.84
CSTF3-206ENST00000524827 YPEL3P61236 119 aaPredicted RBP9.82□□□□□ -0.84
CSTF3-206ENST00000524827 NEDD8Q15843 81 aa9.82□□□□□ -0.84
CSTF3-206ENST00000524827 GDF5OSQ5U4N7 250 aa9.82□□□□□ -0.84
CSTF3-206ENST00000524827 PRSS54Q6PEW0 395 aa9.82□□□□□ -0.84
CSTF3-206ENST00000524827 SIGLEC15Q6ZMC9 328 aa9.82□□□□□ -0.84
CSTF3-206ENST00000524827 MAPKAPK5-AS1Q8N8E1 139 aa9.82□□□□□ -0.84
CSTF3-206ENST00000524827 APOBP04114 4563 aaKnown RBP9.82□□□□□ -0.84
CSTF3-206ENST00000524827 M0QYG6 137 aa9.81□□□□□ -0.84
CSTF3-206ENST00000524827 ATG12O94817 140 aa9.81□□□□□ -0.84
CSTF3-206ENST00000524827 IL4P05112 153 aa9.81□□□□□ -0.84
CSTF3-206ENST00000524827 OR10J1P30954 320 aa9.81□□□□□ -0.84
CSTF3-206ENST00000524827 RPS19P39019 145 aaKnown RBP9.81□□□□□ -0.84
CSTF3-206ENST00000524827 NKX2-1P43699 371 aaPredicted RBP9.81□□□□□ -0.84
CSTF3-206ENST00000524827 PIGPP57054 158 aa9.81□□□□□ -0.84
CSTF3-206ENST00000524827 TNP2Q05952 138 aa9.81□□□□□ -0.84
CSTF3-206ENST00000524827 TRIM16LQ309B1 348 aa9.81□□□□□ -0.84
CSTF3-206ENST00000524827 TMEM88Q6PEY1 159 aa9.81□□□□□ -0.84
CSTF3-206ENST00000524827 ZNF486Q96H40 463 aaPredicted RBP9.81□□□□□ -0.84
CSTF3-206ENST00000524827 YTHDF1Q9BYJ9 559 aaKnown RBP9.81□□□□□ -0.84
CSTF3-206ENST00000524827 SCPEP1Q9HB40 452 aa9.81□□□□□ -0.84
CSTF3-206ENST00000524827 C3orf85A0A1B0GTC6 90 aa9.8□□□□□ -0.84
CSTF3-206ENST00000524827 BUB3O43684 328 aa9.8□□□□□ -0.84
CSTF3-206ENST00000524827 HTR2BP41595 481 aa9.8□□□□□ -0.84
CSTF3-206ENST00000524827 OXA1LQ15070 435 aa9.8□□□□□ -0.84
CSTF3-206ENST00000524827 SNX29P2Q8IUI4 249 aa9.8□□□□□ -0.84
CSTF3-206ENST00000524827 RRNAD1Q96FB5 475 aaKnown RBP9.8□□□□□ -0.84
CSTF3-206ENST00000524827 DNAH5Q8TE73 4624 aa9.79□□□□□ -0.84
CSTF3-206ENST00000524827 GSTZ1O43708 216 aaPredicted RBP9.79□□□□□ -0.84
CSTF3-206ENST00000524827 SLC25A4P12235 298 aa9.79□□□□□ -0.84
CSTF3-206ENST00000524827 SPCS3P61009 180 aa9.79□□□□□ -0.84
CSTF3-206ENST00000524827 SP6Q3SY56 376 aa9.79□□□□□ -0.84
CSTF3-206ENST00000524827 LHFPL1Q86WI0 220 aa9.79□□□□□ -0.84
CSTF3-206ENST00000524827 ZNF709Q8N972 641 aa9.79□□□□□ -0.84
CSTF3-206ENST00000524827 RNASE11Q8TAA1 199 aaKnown RBP9.79□□□□□ -0.84
CSTF3-206ENST00000524827 SAV1Q9H4B6 383 aaPredicted RBP9.79□□□□□ -0.84
CSTF3-206ENST00000524827 NXPH3O95157 252 aa9.78□□□□□ -0.84
CSTF3-206ENST00000524827 TOMM40O96008 361 aa9.78□□□□□ -0.84
CSTF3-206ENST00000524827 UCP1P25874 307 aa9.78□□□□□ -0.84
CSTF3-206ENST00000524827 FAM3BP58499 235 aaPredicted RBP9.78□□□□□ -0.84
CSTF3-206ENST00000524827 AARDQ4LEZ3 155 aa9.78□□□□□ -0.84
CSTF3-206ENST00000524827 C2orf83Q53S99 150 aa9.78□□□□□ -0.84
CSTF3-206ENST00000524827 FOXI2Q6ZQN5 318 aa9.78□□□□□ -0.84
CSTF3-206ENST00000524827 RNASEH2CQ8TDP1 164 aaKnown RBP9.78□□□□□ -0.84
CSTF3-206ENST00000524827 LINC00052Q96N35 136 aa9.78□□□□□ -0.84
CSTF3-206ENST00000524827 CLUHP3Q96NS8 147 aa9.78□□□□□ -0.84
CSTF3-206ENST00000524827 SLC35B3Q9H1N7 401 aa9.78□□□□□ -0.84
CSTF3-206ENST00000524827 HEYLQ9NQ87 328 aaPredicted RBP9.78□□□□□ -0.84
CSTF3-206ENST00000524827 GOLT1BQ9Y3E0 138 aa9.78□□□□□ -0.84
CSTF3-206ENST00000524827 TMED3Q9Y3Q3 217 aa9.78□□□□□ -0.84
CSTF3-206ENST00000524827 YTHDF2Q9Y5A9 579 aaKnown RBP9.78□□□□□ -0.84
CSTF3-206ENST00000524827 LOC102723971A0A1B0GUV8 181 aa9.77□□□□□ -0.85
CSTF3-206ENST00000524827 HBE1P02100 147 aa9.77□□□□□ -0.85
CSTF3-206ENST00000524827 RD3LP0DJH9 198 aa9.77□□□□□ -0.85
CSTF3-206ENST00000524827 DAD1P61803 113 aa9.77□□□□□ -0.85
CSTF3-206ENST00000524827 LSM3P62310 102 aaKnown RBP9.77□□□□□ -0.85
CSTF3-206ENST00000524827 RNASE10Q5GAN6 216 aaKnown RBP9.77□□□□□ -0.85
CSTF3-206ENST00000524827 SLC24A4Q8NFF2 622 aa9.77□□□□□ -0.85
CSTF3-206ENST00000524827 OR4B1Q8NGF8 309 aa9.77□□□□□ -0.85
CSTF3-206ENST00000524827 OR51G1Q8NGK1 321 aa9.77□□□□□ -0.85
CSTF3-206ENST00000524827 OR52E5Q8NH55 327 aa9.77□□□□□ -0.85
CSTF3-206ENST00000524827 TMEM170AQ8WVE7 144 aa9.77□□□□□ -0.85
CSTF3-206ENST00000524827 NPIPB3Q92617 1050 aa9.77□□□□□ -0.85
CSTF3-206ENST00000524827 ACY3Q96HD9 319 aa9.77□□□□□ -0.85
CSTF3-206ENST00000524827 WDR12Q9GZL7 423 aaKnown RBP9.77□□□□□ -0.85
CSTF3-206ENST00000524827 Q9H521 79 aa9.77□□□□□ -0.85
CSTF3-206ENST00000524827 COPZ2Q9P299 210 aa9.77□□□□□ -0.85
CSTF3-206ENST00000524827 COMMD3Q9UBI1 195 aa9.77□□□□□ -0.85
CSTF3-206ENST00000524827 HERC1Q15751 4861 aa9.77□□□□□ -0.85
CSTF3-206ENST00000524827 SMIM31A0A1B0GVY4 71 aa9.76□□□□□ -0.85
CSTF3-206ENST00000524827 APOA1P02647 267 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms