RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 UBE2V1Q13404 147 aa10.68□□□□□ -0.7
CAPN1-202ENST00000524773 MRPL52Q86TS9 123 aaKnown RBP10.68□□□□□ -0.7
CAPN1-202ENST00000524773 OR4C5Q8NGB2 326 aa10.68□□□□□ -0.7
CAPN1-202ENST00000524773 WASHC3Q9Y3C0 194 aa10.68□□□□□ -0.7
CAPN1-202ENST00000524773 PIEZO2Q9H5I5 2752 aa10.68□□□□□ -0.7
CAPN1-202ENST00000524773 ZNF891A8MT65 544 aaPredicted RBP10.68□□□□□ -0.7
CAPN1-202ENST00000524773 M0R1B8 84 aa10.68□□□□□ -0.7
CAPN1-202ENST00000524773 DLX1P56177 255 aa10.68□□□□□ -0.7
CAPN1-202ENST00000524773 PATE2Q6UY27 113 aa10.68□□□□□ -0.7
CAPN1-202ENST00000524773 ZNF738Q8NE65 137 aa10.68□□□□□ -0.7
CAPN1-202ENST00000524773 PGLYRP4Q96LB8 373 aa10.68□□□□□ -0.7
CAPN1-202ENST00000524773 GSX1Q9H4S2 264 aaPredicted RBP10.68□□□□□ -0.7
CAPN1-202ENST00000524773 TRAV9-2A0A087WT02 112 aa10.67□□□□□ -0.7
CAPN1-202ENST00000524773 C21orf140B9A014 251 aa10.67□□□□□ -0.7
CAPN1-202ENST00000524773 CRYABP02511 175 aaKnown RBP10.67□□□□□ -0.7
CAPN1-202ENST00000524773 RNASE2P10153 161 aaKnown RBP10.67□□□□□ -0.7
CAPN1-202ENST00000524773 TBR1Q16650 682 aa10.67□□□□□ -0.7
CAPN1-202ENST00000524773 FBLN7Q53RD9 439 aa10.67□□□□□ -0.7
CAPN1-202ENST00000524773 KLHDC1Q8N7A1 406 aa10.67□□□□□ -0.7
CAPN1-202ENST00000524773 FNDC4Q9H6D8 234 aaPredicted RBP10.67□□□□□ -0.7
CAPN1-202ENST00000524773 CHODLQ9H9P2 273 aa10.67□□□□□ -0.7
CAPN1-202ENST00000524773 RIF1Q5UIP0 2472 aaKnown RBP10.67□□□□□ -0.7
CAPN1-202ENST00000524773 IGHV2-26A0A0B4J1V2 119 aa10.67□□□□□ -0.7
CAPN1-202ENST00000524773 OR2T8A6NH00 312 aa10.67□□□□□ -0.7
CAPN1-202ENST00000524773 F2RL2O00254 374 aa10.67□□□□□ -0.7
CAPN1-202ENST00000524773 MBD6Q96DN6 1003 aa10.67□□□□□ -0.7
CAPN1-202ENST00000524773 SLC25A10Q9UBX3 287 aaPredicted RBP10.67□□□□□ -0.7
CAPN1-202ENST00000524773 TRAV8-1A0A0A6YYK1 113 aa10.66□□□□□ -0.7
CAPN1-202ENST00000524773 OR4C46A6NHA9 309 aa10.66□□□□□ -0.7
CAPN1-202ENST00000524773 FAM90A9PA6NNJ1 464 aa10.66□□□□□ -0.7
CAPN1-202ENST00000524773 UPK2O00526 184 aa10.66□□□□□ -0.7
CAPN1-202ENST00000524773 COX7A2P2O60397 106 aa10.66□□□□□ -0.7
CAPN1-202ENST00000524773 ZNF329Q86UD4 541 aa10.66□□□□□ -0.7
CAPN1-202ENST00000524773 OR5B3Q8NH48 314 aa10.66□□□□□ -0.7
CAPN1-202ENST00000524773 ORAOV1Q8WV07 137 aa10.66□□□□□ -0.7
CAPN1-202ENST00000524773 C22orf15Q8WYQ4 148 aa10.66□□□□□ -0.7
CAPN1-202ENST00000524773 PAXXQ9BUH6 204 aa10.66□□□□□ -0.7
CAPN1-202ENST00000524773 PEX7O00628 323 aa10.66□□□□□ -0.7
CAPN1-202ENST00000524773 NUDT3O95989 172 aa10.66□□□□□ -0.7
CAPN1-202ENST00000524773 TAS2R45P59539 299 aa10.66□□□□□ -0.7
CAPN1-202ENST00000524773 PRCDQ00LT1 54 aa10.66□□□□□ -0.7
CAPN1-202ENST00000524773 SSX8Q7RTT4 187 aa10.66□□□□□ -0.7
CAPN1-202ENST00000524773 RPRMLQ8N4K4 120 aa10.66□□□□□ -0.7
CAPN1-202ENST00000524773 MRPL20Q9BYC9 149 aaKnown RBP10.66□□□□□ -0.7
CAPN1-202ENST00000524773 KBTBD11-OT1A0A1B0GTJ5 212 aa10.65□□□□□ -0.7
CAPN1-202ENST00000524773 IGLC7A0M8Q6 106 aa10.65□□□□□ -0.7
CAPN1-202ENST00000524773 NKX2-8O15522 239 aa10.65□□□□□ -0.7
CAPN1-202ENST00000524773 CCL3L1P16619 93 aa10.65□□□□□ -0.7
CAPN1-202ENST00000524773 HCP5Q6MZN7 132 aa10.65□□□□□ -0.7
CAPN1-202ENST00000524773 OR8B3Q8NGG8 313 aa10.65□□□□□ -0.7
CAPN1-202ENST00000524773 DCHS2Q6V1P9 2916 aa10.65□□□□□ -0.7
CAPN1-202ENST00000524773 IGHV3-72A0A0B4J1Y9 119 aa10.65□□□□□ -0.7
CAPN1-202ENST00000524773 MUC21A0A0G2JKD1 596 aa10.65□□□□□ -0.7
CAPN1-202ENST00000524773 MUC21A0A140T8X8 626 aa10.65□□□□□ -0.7
CAPN1-202ENST00000524773 H0YJW9 148 aa10.65□□□□□ -0.7
CAPN1-202ENST00000524773 RPL19P84098 196 aaKnown RBP10.65□□□□□ -0.7
CAPN1-202ENST00000524773 MUC21Q5SSG8 566 aa10.65□□□□□ -0.7
CAPN1-202ENST00000524773 TPSG1Q9NRR2 321 aa10.65□□□□□ -0.7
CAPN1-202ENST00000524773 A0A087X0K7 114 aa10.65□□□□□ -0.71
CAPN1-202ENST00000524773 A0A1W2PRE2 83 aa10.65□□□□□ -0.71
CAPN1-202ENST00000524773 KLK10O43240 276 aa10.65□□□□□ -0.71
CAPN1-202ENST00000524773 SLC25A5P05141 298 aaKnown RBP10.65□□□□□ -0.71
CAPN1-202ENST00000524773 PSG1P11464 419 aa10.65□□□□□ -0.71
CAPN1-202ENST00000524773 CD69Q07108 199 aa10.65□□□□□ -0.71
CAPN1-202ENST00000524773 C22orf34Q6ZV56 151 aa10.65□□□□□ -0.71
CAPN1-202ENST00000524773 RITA1Q96K30 269 aa10.65□□□□□ -0.71
CAPN1-202ENST00000524773 HARBI1Q96MB7 349 aa10.65□□□□□ -0.71
CAPN1-202ENST00000524773 PGPA6NDG6 321 aa10.64□□□□□ -0.71
CAPN1-202ENST00000524773 KLF3P57682 345 aaPredicted RBP10.64□□□□□ -0.71
CAPN1-202ENST00000524773 WT1-ASQ06250 92 aa10.64□□□□□ -0.71
CAPN1-202ENST00000524773 C10orf113Q5VZT2 155 aa10.64□□□□□ -0.71
CAPN1-202ENST00000524773 OR1B1Q8NGR6 318 aa10.64□□□□□ -0.71
CAPN1-202ENST00000524773 GTSF1Q8WW33 167 aa10.64□□□□□ -0.71
CAPN1-202ENST00000524773 NAA38Q9BRA0 125 aaKnown RBP10.64□□□□□ -0.71
CAPN1-202ENST00000524773 SPTBN2O15020 2390 aa10.64□□□□□ -0.71
CAPN1-202ENST00000524773 CGB3P0DN86 165 aa10.64□□□□□ -0.71
CAPN1-202ENST00000524773 CGB7P0DN87 165 aa10.64□□□□□ -0.71
CAPN1-202ENST00000524773 TNFSF4P23510 183 aa10.64□□□□□ -0.71
CAPN1-202ENST00000524773 LDLRAD2Q5SZI1 272 aa10.64□□□□□ -0.71
CAPN1-202ENST00000524773 FAM120AOSQ5T036 256 aa10.64□□□□□ -0.71
CAPN1-202ENST00000524773 LINC00305Q7Z4B0 112 aa10.64□□□□□ -0.71
CAPN1-202ENST00000524773 CORO2AQ92828 525 aa10.64□□□□□ -0.71
CAPN1-202ENST00000524773 COMMD5Q9GZQ3 224 aa10.64□□□□□ -0.71
CAPN1-202ENST00000524773 PRNDQ9UKY0 176 aa10.64□□□□□ -0.71
CAPN1-202ENST00000524773 PSMB11A5LHX3 300 aa10.63□□□□□ -0.71
CAPN1-202ENST00000524773 FDCSPQ8NFU4 85 aa10.63□□□□□ -0.71
CAPN1-202ENST00000524773 SAP30LQ9HAJ7 183 aa10.63□□□□□ -0.71
CAPN1-202ENST00000524773 IGHV1-24A0A0C4DH33 117 aa10.63□□□□□ -0.71
CAPN1-202ENST00000524773 FXYD7P58549 80 aa10.63□□□□□ -0.71
CAPN1-202ENST00000524773 MUC15Q8N387 334 aa10.63□□□□□ -0.71
CAPN1-202ENST00000524773 PPP1R35Q8TAP8 253 aa10.63□□□□□ -0.71
CAPN1-202ENST00000524773 ZNF596Q8TC21 504 aa10.63□□□□□ -0.71
CAPN1-202ENST00000524773 TMEM70Q9BUB7 260 aa10.63□□□□□ -0.71
CAPN1-202ENST00000524773 MRPS16Q9Y3D3 137 aaKnown RBP10.63□□□□□ -0.71
CAPN1-202ENST00000524773 DSCAML1Q8TD84 2053 aa10.63□□□□□ -0.71
CAPN1-202ENST00000524773 RAI1Q7Z5J4 1906 aaPredicted RBP10.62□□□□□ -0.71
CAPN1-202ENST00000524773 A0A1W2PRD5 423 aa10.62□□□□□ -0.71
CAPN1-202ENST00000524773 A0A1W2PRF3 423 aa10.62□□□□□ -0.71
CAPN1-202ENST00000524773 A0A1W2PRM7 423 aa10.62□□□□□ -0.71
CAPN1-202ENST00000524773 CCL8P80075 99 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms