RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 PDE6DO43924 150 aa5.61□□□□□ -1.51
VPS11-201ENST00000524454 CXorf1O96002 111 aa5.61□□□□□ -1.51
VPS11-201ENST00000524454 IGKV1D-33P01593 117 aa5.61□□□□□ -1.51
VPS11-201ENST00000524454 IGKV1-33P01594 117 aa5.61□□□□□ -1.51
VPS11-201ENST00000524454 FABP1P07148 127 aa5.61□□□□□ -1.51
VPS11-201ENST00000524454 FAM106CPP0CH98 169 aa5.61□□□□□ -1.51
VPS11-201ENST00000524454 STAG3L2P0CL84 134 aa5.61□□□□□ -1.51
VPS11-201ENST00000524454 STAG3L3P0CL85 134 aa5.61□□□□□ -1.51
VPS11-201ENST00000524454 TAS2R45P59539 299 aa5.61□□□□□ -1.51
VPS11-201ENST00000524454 BPIFB3P59826 476 aa5.61□□□□□ -1.51
VPS11-201ENST00000524454 B2MP61769 119 aa5.61□□□□□ -1.51
VPS11-201ENST00000524454 SRSF3P84103 164 aaKnown RBP5.61□□□□□ -1.51
VPS11-201ENST00000524454 DEFA5Q01523 94 aa5.61□□□□□ -1.51
VPS11-201ENST00000524454 MEF2BQ02080 365 aaPredicted RBP5.61□□□□□ -1.51
VPS11-201ENST00000524454 GAMTQ14353 236 aa5.61□□□□□ -1.51
VPS11-201ENST00000524454 HNF4GQ14541 408 aa5.61□□□□□ -1.51
VPS11-201ENST00000524454 ICAM4Q14773 271 aa5.61□□□□□ -1.51
VPS11-201ENST00000524454 C5orf64Q2M2E5 130 aa5.61□□□□□ -1.51
VPS11-201ENST00000524454 SPINK9Q5DT21 86 aa5.61□□□□□ -1.51
VPS11-201ENST00000524454 ZNF562Q6V9R5 426 aa5.61□□□□□ -1.51
VPS11-201ENST00000524454 SLC16A13Q7RTY0 426 aa5.61□□□□□ -1.51
VPS11-201ENST00000524454 STPG3Q8N7X2 389 aa5.61□□□□□ -1.51
VPS11-201ENST00000524454 CLRN3Q8NCR9 226 aa5.61□□□□□ -1.51
VPS11-201ENST00000524454 GATAD1Q8WUU5 269 aa5.61□□□□□ -1.51
VPS11-201ENST00000524454 RAB24Q969Q5 203 aa5.61□□□□□ -1.51
VPS11-201ENST00000524454 TMEM68Q96MH6 324 aa5.61□□□□□ -1.51
VPS11-201ENST00000524454 ATP6V0BQ99437 205 aa5.61□□□□□ -1.51
VPS11-201ENST00000524454 PFDN5Q99471 154 aa5.61□□□□□ -1.51
VPS11-201ENST00000524454 NIPSNAP3BQ9BS92 247 aa5.61□□□□□ -1.51
VPS11-201ENST00000524454 HINT2Q9BX68 163 aa5.61□□□□□ -1.51
VPS11-201ENST00000524454 METTL1Q9UBP6 276 aaKnown RBP5.61□□□□□ -1.51
VPS11-201ENST00000524454 SLC45A2Q9UMX9 530 aa5.61□□□□□ -1.51
VPS11-201ENST00000524454 FAM96BQ9Y3D0 163 aa5.61□□□□□ -1.51
VPS11-201ENST00000524454 F11RQ9Y624 299 aaKnown RBP5.61□□□□□ -1.51
VPS11-201ENST00000524454 ATRQ13535 2644 aa5.61□□□□□ -1.51
VPS11-201ENST00000524454 IGHV1-69DA0A0B4J2H0 117 aa5.6□□□□□ -1.51
VPS11-201ENST00000524454 CXorf65A6NEN9 183 aa5.6□□□□□ -1.51
VPS11-201ENST00000524454 NPIPB5A8MRT5 1133 aa5.6□□□□□ -1.51
VPS11-201ENST00000524454 CLN5O75503 358 aa5.6□□□□□ -1.51
VPS11-201ENST00000524454 YIF1AO95070 293 aa5.6□□□□□ -1.51
VPS11-201ENST00000524454 IGHV1-69P01742 117 aa5.6□□□□□ -1.51
VPS11-201ENST00000524454 HLA-DRB1P01911 266 aa5.6□□□□□ -1.51
VPS11-201ENST00000524454 SRP19P09132 144 aaKnown RBP5.6□□□□□ -1.51
VPS11-201ENST00000524454 OR5G3P0C626 314 aa5.6□□□□□ -1.51
VPS11-201ENST00000524454 OR13C7P0DN81 318 aa5.6□□□□□ -1.51
VPS11-201ENST00000524454 ELLP55199 621 aaPredicted RBP5.6□□□□□ -1.51
VPS11-201ENST00000524454 MMDQ15546 238 aa5.6□□□□□ -1.51
VPS11-201ENST00000524454 TNXAQ16473 311 aa5.6□□□□□ -1.51
VPS11-201ENST00000524454 GUCA2BQ16661 112 aa5.6□□□□□ -1.51
VPS11-201ENST00000524454 PQLC2Q6ZP29 291 aa5.6□□□□□ -1.51
VPS11-201ENST00000524454 S100A7AQ86SG5 101 aa5.6□□□□□ -1.51
VPS11-201ENST00000524454 STXBP6Q8NFX7 210 aa5.6□□□□□ -1.51
VPS11-201ENST00000524454 OR1L4Q8NGR5 311 aa5.6□□□□□ -1.51
VPS11-201ENST00000524454 SRSF12Q8WXF0 261 aaKnown RBP5.6□□□□□ -1.51
VPS11-201ENST00000524454 EAF1Q96JC9 268 aaPredicted RBP5.6□□□□□ -1.51
VPS11-201ENST00000524454 JMJD8Q96S16 334 aa5.6□□□□□ -1.51
VPS11-201ENST00000524454 TRGV9Q99603 122 aa5.6□□□□□ -1.51
VPS11-201ENST00000524454 VSIRQ9H7M9 311 aa5.6□□□□□ -1.51
VPS11-201ENST00000524454 TMEM167BQ9NRX6 74 aa5.6□□□□□ -1.51
VPS11-201ENST00000524454 TMEM242Q9NWH2 141 aa5.6□□□□□ -1.51
VPS11-201ENST00000524454 RNF24Q9Y225 148 aa5.6□□□□□ -1.51
VPS11-201ENST00000524454 COL6A5A8TX70 2615 aa5.6□□□□□ -1.51
VPS11-201ENST00000524454 TCRBV4S1A1TA0A5B7 111 aa5.59□□□□□ -1.51
VPS11-201ENST00000524454 C9JQL5 133 aa5.59□□□□□ -1.51
VPS11-201ENST00000524454 F6UZH7 168 aa5.59□□□□□ -1.51
VPS11-201ENST00000524454 NPFFO15130 113 aa5.59□□□□□ -1.51
VPS11-201ENST00000524454 SCGB2A1O75556 95 aa5.59□□□□□ -1.51
VPS11-201ENST00000524454 BRI3O95415 125 aa5.59□□□□□ -1.51
VPS11-201ENST00000524454 LINC00869P0C866 280 aa5.59□□□□□ -1.51
VPS11-201ENST00000524454 AREGP15514 252 aa5.59□□□□□ -1.51
VPS11-201ENST00000524454 CTRB1P17538 263 aa5.59□□□□□ -1.51
VPS11-201ENST00000524454 FCGR2BP31994 310 aaPredicted RBP5.59□□□□□ -1.51
VPS11-201ENST00000524454 PLP1P60201 277 aa5.59□□□□□ -1.51
VPS11-201ENST00000524454 CCL20P78556 96 aa5.59□□□□□ -1.51
VPS11-201ENST00000524454 SSBP2P81877 361 aaPredicted RBP5.59□□□□□ -1.51
VPS11-201ENST00000524454 LDLRAD2Q5SZI1 272 aa5.59□□□□□ -1.51
VPS11-201ENST00000524454 CTRB2Q6GPI1 263 aa5.59□□□□□ -1.51
VPS11-201ENST00000524454 LCN15Q6UWW0 184 aa5.59□□□□□ -1.51
VPS11-201ENST00000524454 C12orf54Q6X4T0 127 aa5.59□□□□□ -1.51
VPS11-201ENST00000524454 C9orf139Q6ZV77 190 aa5.59□□□□□ -1.51
VPS11-201ENST00000524454 OR10W1Q8NGF6 305 aa5.59□□□□□ -1.51
VPS11-201ENST00000524454 OR4X1Q8NH49 305 aa5.59□□□□□ -1.51
VPS11-201ENST00000524454 C17orf50Q8WW18 174 aa5.59□□□□□ -1.51
VPS11-201ENST00000524454 TMEM231Q9H6L2 316 aa5.59□□□□□ -1.51
VPS11-201ENST00000524454 SLC25A22Q9H936 323 aa5.59□□□□□ -1.51
VPS11-201ENST00000524454 SMCO4Q9NRQ5 59 aa5.59□□□□□ -1.51
VPS11-201ENST00000524454 THYN1Q9P016 225 aa5.59□□□□□ -1.51
VPS11-201ENST00000524454 GNG13Q9P2W3 67 aa5.59□□□□□ -1.51
VPS11-201ENST00000524454 FUT9Q9Y231 359 aa5.59□□□□□ -1.51
VPS11-201ENST00000524454 TET2Q6N021 2002 aaPredicted RBP5.58□□□□□ -1.52
VPS11-201ENST00000524454 IGKV1OR2-108A0A075B7D4 117 aa5.58□□□□□ -1.52
VPS11-201ENST00000524454 TRAV30A0A087WSZ9 112 aa5.58□□□□□ -1.52
VPS11-201ENST00000524454 PSMB11A5LHX3 300 aa5.58□□□□□ -1.52
VPS11-201ENST00000524454 E7EUB6 86 aa5.58□□□□□ -1.52
VPS11-201ENST00000524454 M0QZK8 103 aa5.58□□□□□ -1.52
VPS11-201ENST00000524454 DNASE2O00115 360 aaPredicted RBP5.58□□□□□ -1.52
VPS11-201ENST00000524454 HMGB3O15347 200 aaKnown RBP5.58□□□□□ -1.52
VPS11-201ENST00000524454 IGHV4-59P01825 116 aa5.58□□□□□ -1.52
VPS11-201ENST00000524454 HIST1H1BP16401 226 aaKnown RBP5.58□□□□□ -1.52
VPS11-201ENST00000524454 SAA4P35542 130 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms