RNA–Protein interactions for RNA: ENST00000524040.5

PTK2-254, Transcript of protein tyrosine kinase 2, human

TSL 2

Gene PTK2, Length 475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-254	ENST00000524040		U3KQ87	197 aa		13.69	□□□□□ -0.22
PTK2-254	ENST00000524040	KMT2A	Q03164	3969 aa		13.69	□□□□□ -0.22
PTK2-254	ENST00000524040	HERC2	O95714	4834 aa		13.68	□□□□□ -0.22
PTK2-254	ENST00000524040	MFSD2B	A6NFX1	497 aa		13.68	□□□□□ -0.22
PTK2-254	ENST00000524040		K7EIM0	57 aa		13.68	□□□□□ -0.22
PTK2-254	ENST00000524040	NKX2-1	P43699	371 aa	Predicted RBP	13.68	□□□□□ -0.22
PTK2-254	ENST00000524040	IAH1	Q2TAA2	248 aa	Predicted RBP	13.68	□□□□□ -0.22
PTK2-254	ENST00000524040	ZNF502	Q8TBZ5	544 aa		13.68	□□□□□ -0.22
PTK2-254	ENST00000524040	CIB3	Q96Q77	187 aa	Predicted RBP	13.68	□□□□□ -0.22
PTK2-254	ENST00000524040	UBQLN2	Q9UHD9	624 aa		13.68	□□□□□ -0.22
PTK2-254	ENST00000524040		I3L2K1	104 aa		13.67	□□□□□ -0.22
PTK2-254	ENST00000524040	SYNGR2	O43760	224 aa		13.67	□□□□□ -0.22
PTK2-254	ENST00000524040	NPY1R	P25929	384 aa		13.67	□□□□□ -0.22
PTK2-254	ENST00000524040	ID3	Q02535	119 aa		13.67	□□□□□ -0.22
PTK2-254	ENST00000524040	RGS21	Q2M5E4	152 aa		13.67	□□□□□ -0.22
PTK2-254	ENST00000524040	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	13.67	□□□□□ -0.22
PTK2-254	ENST00000524040	RNASEH2C	Q8TDP1	164 aa	Known RBP	13.67	□□□□□ -0.22
PTK2-254	ENST00000524040	MISP3	Q96FF7	219 aa		13.67	□□□□□ -0.22
PTK2-254	ENST00000524040	OR10C1	Q96KK4	312 aa		13.67	□□□□□ -0.22
PTK2-254	ENST00000524040	TP53TG1	Q9Y2A0	90 aa		13.67	□□□□□ -0.22
PTK2-254	ENST00000524040	C7orf66	A4D0T2	115 aa		13.66	□□□□□ -0.22
PTK2-254	ENST00000524040		A8MWP6	167 aa		13.66	□□□□□ -0.22
PTK2-254	ENST00000524040	FCGR2B	P31994	310 aa	Predicted RBP	13.66	□□□□□ -0.22
PTK2-254	ENST00000524040		Q6ZWC4	215 aa		13.66	□□□□□ -0.22
PTK2-254	ENST00000524040	WFDC3	Q8IUB2	231 aa		13.66	□□□□□ -0.22
PTK2-254	ENST00000524040	SCARB1	Q8WTV0	552 aa		13.66	□□□□□ -0.22
PTK2-254	ENST00000524040	C21orf62	Q9NYP8	219 aa		13.66	□□□□□ -0.22
PTK2-254	ENST00000524040	WRB	O00258	174 aa		13.65	□□□□□ -0.22
PTK2-254	ENST00000524040	CCS	O14618	274 aa		13.65	□□□□□ -0.22
PTK2-254	ENST00000524040	MT-CO2	P00403	227 aa		13.65	□□□□□ -0.22
PTK2-254	ENST00000524040	GSG1L	Q6UXU4	331 aa		13.65	□□□□□ -0.22
PTK2-254	ENST00000524040	TMEM217	Q8N7C4	229 aa		13.65	□□□□□ -0.22
PTK2-254	ENST00000524040	BSCL2	Q96G97	398 aa	Predicted RBP	13.65	□□□□□ -0.22
PTK2-254	ENST00000524040	TXN2	Q99757	166 aa		13.65	□□□□□ -0.22
PTK2-254	ENST00000524040	DNAH10	Q8IVF4	4471 aa		13.65	□□□□□ -0.22
PTK2-254	ENST00000524040	TRAV25	A0A0B4J276	109 aa		13.64	□□□□□ -0.23
PTK2-254	ENST00000524040	IGHV3-35	A0A0C4DH35	117 aa		13.64	□□□□□ -0.23
PTK2-254	ENST00000524040	RPS10-NUDT3	A0A1W2PQS6	291 aa		13.64	□□□□□ -0.23
PTK2-254	ENST00000524040	C5orf51	A6NDU8	294 aa		13.64	□□□□□ -0.23
PTK2-254	ENST00000524040	IFNA10	P01566	189 aa		13.64	□□□□□ -0.23
PTK2-254	ENST00000524040	RPP30	P78346	268 aa	Known RBP	13.64	□□□□□ -0.23
PTK2-254	ENST00000524040	SPSB3	Q6PJ21	355 aa		13.64	□□□□□ -0.23
PTK2-254	ENST00000524040	UNQ9165/PRO28630	Q6UXU0	137 aa		13.64	□□□□□ -0.23
PTK2-254	ENST00000524040	STPG3	Q8N7X2	389 aa		13.64	□□□□□ -0.23
PTK2-254	ENST00000524040	PHLDA1	Q8WV24	401 aa	Predicted RBP	13.64	□□□□□ -0.23
PTK2-254	ENST00000524040	PINX1	Q96BK5	328 aa	Known RBP	13.64	□□□□□ -0.23
PTK2-254	ENST00000524040	C2orf50	Q96LR7	162 aa		13.64	□□□□□ -0.23
PTK2-254	ENST00000524040	FAM25E	A8MYX2	175 aa		13.63	□□□□□ -0.23
PTK2-254	ENST00000524040	CLEC3B	P05452	202 aa		13.63	□□□□□ -0.23
PTK2-254	ENST00000524040	IAPP	P10997	89 aa		13.63	□□□□□ -0.23
PTK2-254	ENST00000524040	RPL35A	P18077	110 aa	Known RBP	13.63	□□□□□ -0.23
PTK2-254	ENST00000524040	GPR183	P32249	361 aa		13.63	□□□□□ -0.23
PTK2-254	ENST00000524040	OPRK1	P41145	380 aa		13.63	□□□□□ -0.23
PTK2-254	ENST00000524040	MFAP4	P55083	255 aa		13.63	□□□□□ -0.23
PTK2-254	ENST00000524040	POLR2G	P62487	172 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
PTK2-254	ENST00000524040	TMEM170A	Q8WVE7	144 aa		13.63	□□□□□ -0.23
PTK2-254	ENST00000524040	MARC2	Q969Z3	335 aa		13.63	□□□□□ -0.23
PTK2-254	ENST00000524040	MAGT1	Q9H0U3	335 aa		13.63	□□□□□ -0.23
PTK2-254	ENST00000524040	GSKIP	Q9P0R6	139 aa		13.63	□□□□□ -0.23
PTK2-254	ENST00000524040		F8W735	103 aa	Predicted RBP	13.62	□□□□□ -0.23
PTK2-254	ENST00000524040	UBE2C	O00762	179 aa		13.62	□□□□□ -0.23
PTK2-254	ENST00000524040	TGOLN2	O43493	480 aa		13.62	□□□□□ -0.23
PTK2-254	ENST00000524040	NPBWR1	P48145	328 aa		13.62	□□□□□ -0.23
PTK2-254	ENST00000524040	RAB11A	P62491	216 aa		13.62	□□□□□ -0.23
PTK2-254	ENST00000524040	OXA1L	Q15070	435 aa		13.62	□□□□□ -0.23
PTK2-254	ENST00000524040	LGALS9C	Q6DKI2	356 aa		13.62	□□□□□ -0.23
PTK2-254	ENST00000524040	ETFRF1	Q6IPR1	90 aa		13.62	□□□□□ -0.23
PTK2-254	ENST00000524040	RNF183	Q96D59	192 aa		13.62	□□□□□ -0.23
PTK2-254	ENST00000524040	RAB40C	Q96S21	281 aa		13.62	□□□□□ -0.23
PTK2-254	ENST00000524040	FNDC4	Q9H6D8	234 aa	Predicted RBP	13.62	□□□□□ -0.23
PTK2-254	ENST00000524040	MRPL27	Q9P0M9	148 aa	Known RBP	13.62	□□□□□ -0.23
PTK2-254	ENST00000524040	UFC1	Q9Y3C8	167 aa		13.62	□□□□□ -0.23
PTK2-254	ENST00000524040	IGHV3-21	A0A0B4J1V1	117 aa		13.61	□□□□□ -0.23
PTK2-254	ENST00000524040	C15orf62	A8K5M9	175 aa		13.61	□□□□□ -0.23
PTK2-254	ENST00000524040	SCGB1D2	O95969	90 aa		13.61	□□□□□ -0.23
PTK2-254	ENST00000524040	SLC25A4	P12235	298 aa		13.61	□□□□□ -0.23
PTK2-254	ENST00000524040	TAS2R30	P59541	319 aa		13.61	□□□□□ -0.23
PTK2-254	ENST00000524040		Q56UQ5	140 aa		13.61	□□□□□ -0.23
PTK2-254	ENST00000524040	SMIM8	Q96KF7	97 aa		13.61	□□□□□ -0.23
PTK2-254	ENST00000524040	SPAG8	Q99932	426 aa	Predicted RBP	13.61	□□□□□ -0.23
PTK2-254	ENST00000524040	OR2T8	A6NH00	312 aa		13.6	□□□□□ -0.23
PTK2-254	ENST00000524040	GOSR2	O14653	212 aa		13.6	□□□□□ -0.23
PTK2-254	ENST00000524040	SSNA1	O43805	119 aa		13.6	□□□□□ -0.23
PTK2-254	ENST00000524040	SSSCA1	O60232	199 aa		13.6	□□□□□ -0.23
PTK2-254	ENST00000524040	MBP	P02686	304 aa	Predicted RBP	13.6	□□□□□ -0.23
PTK2-254	ENST00000524040	IL15RA	Q13261	267 aa		13.6	□□□□□ -0.23
PTK2-254	ENST00000524040	UBAC2	Q8NBM4	344 aa		13.6	□□□□□ -0.23
PTK2-254	ENST00000524040	OR4X1	Q8NH49	305 aa		13.6	□□□□□ -0.23
PTK2-254	ENST00000524040	RCL1	Q9Y2P8	373 aa	Known RBP	13.6	□□□□□ -0.23
PTK2-254	ENST00000524040	ALG5	Q9Y673	324 aa		13.6	□□□□□ -0.23
PTK2-254	ENST00000524040	NUPL2	O15504	423 aa	Known RBP	13.59	□□□□□ -0.23
PTK2-254	ENST00000524040	GNG7	O60262	68 aa		13.59	□□□□□ -0.23
PTK2-254	ENST00000524040	SCGB2A1	O75556	95 aa		13.59	□□□□□ -0.23
PTK2-254	ENST00000524040	IFNA4	P05014	189 aa		13.59	□□□□□ -0.23
PTK2-254	ENST00000524040	C8orf88	P0DMB2	117 aa		13.59	□□□□□ -0.23
PTK2-254	ENST00000524040	ATF4	P18848	351 aa	Predicted RBP	13.59	□□□□□ -0.23
PTK2-254	ENST00000524040	CYCS	P99999	105 aa	Known RBP	13.59	□□□□□ -0.23
PTK2-254	ENST00000524040	NMES1	Q9C002	83 aa		13.59	□□□□□ -0.23
PTK2-254	ENST00000524040	PSENEN	Q9NZ42	101 aa		13.59	□□□□□ -0.23
PTK2-254	ENST00000524040	FBXL17	Q9UF56	701 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms