RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 C12orf45Q8N5I9 185 aaPredicted RBP7.11□□□□□ -1.27
CLK4-209ENST00000521621 GPN1Q9HCN4 374 aaPredicted RBP7.11□□□□□ -1.27
CLK4-209ENST00000521621 NUDT15Q9NV35 164 aa7.11□□□□□ -1.27
CLK4-209ENST00000521621 PRKDCP78527 4128 aaKnown RBP7.11□□□□□ -1.27
CLK4-209ENST00000521621 TRAV14DV4A0A0A6YYC5 116 aa7.11□□□□□ -1.27
CLK4-209ENST00000521621 A0A1W2PS18 150 aa7.11□□□□□ -1.27
CLK4-209ENST00000521621 PMS2P5A8MQ11 134 aa7.11□□□□□ -1.27
CLK4-209ENST00000521621 IFNA10P01566 189 aa7.11□□□□□ -1.27
CLK4-209ENST00000521621 HOXB5P09067 269 aa7.11□□□□□ -1.27
CLK4-209ENST00000521621 S4R3C0 116 aa7.11□□□□□ -1.27
CLK4-209ENST00000521621 MRPL36Q9P0J6 103 aaKnown RBP7.1□□□□□ -1.27
CLK4-209ENST00000521621 ZNF320A2RRD8 509 aa7.1□□□□□ -1.27
CLK4-209ENST00000521621 ADAP1O75689 374 aa7.1□□□□□ -1.27
CLK4-209ENST00000521621 OR10J1P30954 320 aa7.1□□□□□ -1.27
CLK4-209ENST00000521621 DLK1P80370 383 aa7.1□□□□□ -1.27
CLK4-209ENST00000521621 ENKURQ8TC29 256 aa7.1□□□□□ -1.27
CLK4-209ENST00000521621 Q8WTZ3 238 aa7.1□□□□□ -1.27
CLK4-209ENST00000521621 PINX1Q96BK5 328 aaKnown RBP7.1□□□□□ -1.27
CLK4-209ENST00000521621 C2orf50Q96LR7 162 aa7.1□□□□□ -1.27
CLK4-209ENST00000521621 STRAPQ9Y3F4 350 aaKnown RBP7.1□□□□□ -1.27
CLK4-209ENST00000521621 IZUMO1RA6ND01 250 aa7.09□□□□□ -1.27
CLK4-209ENST00000521621 DFFBO76075 338 aa7.09□□□□□ -1.27
CLK4-209ENST00000521621 PRB2P02812 416 aaPredicted RBP7.09□□□□□ -1.27
CLK4-209ENST00000521621 S100A7P31151 101 aa7.09□□□□□ -1.27
CLK4-209ENST00000521621 PAX9P55771 341 aa7.09□□□□□ -1.27
CLK4-209ENST00000521621 GAMTQ14353 236 aa7.09□□□□□ -1.27
CLK4-209ENST00000521621 TMEM61Q8N0U2 210 aa7.09□□□□□ -1.27
CLK4-209ENST00000521621 SLC35E1Q96K37 410 aa7.09□□□□□ -1.27
CLK4-209ENST00000521621 NEURL2Q9BR09 285 aa7.09□□□□□ -1.27
CLK4-209ENST00000521621 TM2D3Q9BRN9 247 aa7.09□□□□□ -1.27
CLK4-209ENST00000521621 IGKV1D-37A0A075B6S9 117 aa7.09□□□□□ -1.27
CLK4-209ENST00000521621 OR4C46A6NHA9 309 aa7.09□□□□□ -1.27
CLK4-209ENST00000521621 PTTG1O95997 202 aa7.09□□□□□ -1.27
CLK4-209ENST00000521621 IAH1Q2TAA2 248 aaPredicted RBP7.09□□□□□ -1.27
CLK4-209ENST00000521621 PXDC1Q5TGL8 231 aa7.09□□□□□ -1.27
CLK4-209ENST00000521621 CHAC2Q8WUX2 184 aa7.09□□□□□ -1.27
CLK4-209ENST00000521621 GRAMD2BQ96HH9 432 aa7.09□□□□□ -1.27
CLK4-209ENST00000521621 PFDN2Q9UHV9 154 aa7.09□□□□□ -1.27
CLK4-209ENST00000521621 PUS1Q9Y606 427 aaKnown RBP eCLIP7.09□□□□□ -1.27
CLK4-209ENST00000521621 DEDDO75618 318 aa7.08□□□□□ -1.28
CLK4-209ENST00000521621 NXPH3O95157 252 aa7.08□□□□□ -1.28
CLK4-209ENST00000521621 RND2P52198 227 aa7.08□□□□□ -1.28
CLK4-209ENST00000521621 C1orf194Q5T5A4 169 aa7.08□□□□□ -1.28
CLK4-209ENST00000521621 UBAC2Q8NBM4 344 aa7.08□□□□□ -1.28
CLK4-209ENST00000521621 METTL26Q96S19 204 aa7.08□□□□□ -1.28
CLK4-209ENST00000521621 RHPN1-AS1Q9BWJ2 59 aa7.08□□□□□ -1.28
CLK4-209ENST00000521621 NMES1Q9C002 83 aa7.08□□□□□ -1.28
CLK4-209ENST00000521621 RCL1Q9Y2P8 373 aaKnown RBP7.08□□□□□ -1.28
CLK4-209ENST00000521621 IGHV3-21A0A0B4J1V1 117 aa7.08□□□□□ -1.28
CLK4-209ENST00000521621 LINC00854A0A1B0GVQ3 168 aa7.08□□□□□ -1.28
CLK4-209ENST00000521621 C7orf66A4D0T2 115 aa7.08□□□□□ -1.28
CLK4-209ENST00000521621 HNRNPCP07910 306 aaKnown RBP eCLIP7.08□□□□□ -1.28
CLK4-209ENST00000521621 IGHV4-30-4P0DP06 118 aa7.08□□□□□ -1.28
CLK4-209ENST00000521621 NPPCP23582 126 aa7.08□□□□□ -1.28
CLK4-209ENST00000521621 PLP1P60201 277 aa7.08□□□□□ -1.28
CLK4-209ENST00000521621 CYCSP99999 105 aaKnown RBP7.08□□□□□ -1.28
CLK4-209ENST00000521621 TIGITQ495A1 244 aa7.08□□□□□ -1.28
CLK4-209ENST00000521621 SAMD13Q5VXD3 122 aa7.08□□□□□ -1.28
CLK4-209ENST00000521621 RBPMS2Q6ZRY4 209 aaKnown RBP7.08□□□□□ -1.28
CLK4-209ENST00000521621 TMEM144Q7Z5S9 345 aa7.08□□□□□ -1.28
CLK4-209ENST00000521621 NARS2Q96I59 477 aaKnown RBP7.08□□□□□ -1.28
CLK4-209ENST00000521621 FBXL17Q9UF56 701 aa7.08□□□□□ -1.28
CLK4-209ENST00000521621 TRAV6A0A075B6T7 132 aa7.08□□□□□ -1.28
CLK4-209ENST00000521621 HELTA6NFD8 242 aa7.08□□□□□ -1.28
CLK4-209ENST00000521621 MPTX1A8MV57 137 aa7.08□□□□□ -1.28
CLK4-209ENST00000521621 MBPP02686 304 aaPredicted RBP7.08□□□□□ -1.28
CLK4-209ENST00000521621 IFNA4P05014 189 aa7.08□□□□□ -1.28
CLK4-209ENST00000521621 AP2S1P53680 142 aaPredicted RBP7.08□□□□□ -1.28
CLK4-209ENST00000521621 VWC2Q2TAL6 325 aa7.08□□□□□ -1.28
CLK4-209ENST00000521621 C16orf54Q6UWD8 224 aa7.08□□□□□ -1.28
CLK4-209ENST00000521621 BTNL8Q6UX41 500 aa7.08□□□□□ -1.28
CLK4-209ENST00000521621 GSG1LQ6UXU4 331 aa7.08□□□□□ -1.28
CLK4-209ENST00000521621 NRARPQ7Z6K4 114 aa7.08□□□□□ -1.28
CLK4-209ENST00000521621 OR51G1Q8NGK1 321 aa7.08□□□□□ -1.28
CLK4-209ENST00000521621 OR52B4Q8NGK2 314 aa7.08□□□□□ -1.28
CLK4-209ENST00000521621 ASB13Q8WXK3 278 aa7.08□□□□□ -1.28
CLK4-209ENST00000521621 NPIPB3Q92617 1050 aa7.08□□□□□ -1.28
CLK4-209ENST00000521621 PSENENQ9NZ42 101 aa7.08□□□□□ -1.28
CLK4-209ENST00000521621 RNF24Q9Y225 148 aa7.08□□□□□ -1.28
CLK4-209ENST00000521621 INMT-MINDY4F8WBC2 141 aa7.07□□□□□ -1.28
CLK4-209ENST00000521621 FRMD6-AS1P0C7T7 363 aa7.07□□□□□ -1.28
CLK4-209ENST00000521621 EDN2P20800 178 aa7.07□□□□□ -1.28
CLK4-209ENST00000521621 EIF2B2P49770 351 aaKnown RBP7.07□□□□□ -1.28
CLK4-209ENST00000521621 MLANAQ16655 118 aa7.07□□□□□ -1.28
CLK4-209ENST00000521621 DEFB121Q5J5C9 76 aa7.07□□□□□ -1.28
CLK4-209ENST00000521621 WDR89Q96FK6 387 aaPredicted RBP7.07□□□□□ -1.28
CLK4-209ENST00000521621 SEC22CQ9BRL7 303 aa7.07□□□□□ -1.28
CLK4-209ENST00000521621 KIR2DL5BA0A0G2JN68 375 aa7.07□□□□□ -1.28
CLK4-209ENST00000521621 KIR2DL5BA0A0G2JPC4 375 aa7.07□□□□□ -1.28
CLK4-209ENST00000521621 WRBO00258 174 aa7.07□□□□□ -1.28
CLK4-209ENST00000521621 RD3LP0DJH9 198 aa7.07□□□□□ -1.28
CLK4-209ENST00000521621 CD81P60033 236 aa7.07□□□□□ -1.28
CLK4-209ENST00000521621 SELENOTP62341 195 aa7.07□□□□□ -1.28
CLK4-209ENST00000521621 POLR2GP62487 172 aaKnown RBP eCLIP7.07□□□□□ -1.28
CLK4-209ENST00000521621 KIR2DL5AQ8N109 375 aa7.07□□□□□ -1.28
CLK4-209ENST00000521621 KIR2DL5BQ8NHK3 375 aa7.07□□□□□ -1.28
CLK4-209ENST00000521621 GLMPQ8WWB7 406 aa7.07□□□□□ -1.28
CLK4-209ENST00000521621 DNAH9Q9NYC9 4486 aa7.06□□□□□ -1.28
CLK4-209ENST00000521621 UBE2CO00762 179 aa7.06□□□□□ -1.28
CLK4-209ENST00000521621 PAFAH1B2P68402 229 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms