RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 PERPQ96FX8 193 aa9.14□□□□□ -0.95
CLK4-206ENST00000520878 RBM14Q96PK6 669 aaKnown RBP9.14□□□□□ -0.95
CLK4-206ENST00000520878 TLN2Q9Y4G6 2542 aa9.13□□□□□ -0.95
CLK4-206ENST00000520878 GPX4P36969 197 aaPredicted RBP9.13□□□□□ -0.95
CLK4-206ENST00000520878 OR8I2Q8N0Y5 310 aa9.13□□□□□ -0.95
CLK4-206ENST00000520878 LINC00311Q8N616 119 aa9.13□□□□□ -0.95
CLK4-206ENST00000520878 RNASE7Q9H1E1 156 aaKnown RBP9.13□□□□□ -0.95
CLK4-206ENST00000520878 LINC00574Q9H8X3 128 aa9.13□□□□□ -0.95
CLK4-206ENST00000520878 MRPL36Q9P0J6 103 aaKnown RBP9.13□□□□□ -0.95
CLK4-206ENST00000520878 TIMM8BQ9Y5J9 83 aaPredicted RBP9.13□□□□□ -0.95
CLK4-206ENST00000520878 CCDC168Q8NDH2 2452 aa9.13□□□□□ -0.95
CLK4-206ENST00000520878 ATP5IP56385 69 aaPredicted RBP9.13□□□□□ -0.95
CLK4-206ENST00000520878 GNG5P63218 68 aa9.13□□□□□ -0.95
CLK4-206ENST00000520878 OR4A5Q8NH83 315 aa9.13□□□□□ -0.95
CLK4-206ENST00000520878 DAZAP1Q96EP5 407 aaKnown RBP9.13□□□□□ -0.95
CLK4-206ENST00000520878 RAI1Q7Z5J4 1906 aaPredicted RBP9.13□□□□□ -0.95
CLK4-206ENST00000520878 TCRBV4S1A1TA0A5B7 111 aa9.13□□□□□ -0.95
CLK4-206ENST00000520878 VENTXO95231 258 aa9.13□□□□□ -0.95
CLK4-206ENST00000520878 TMEM11P17152 192 aa9.13□□□□□ -0.95
CLK4-206ENST00000520878 MORN5Q5VZ52 161 aa9.13□□□□□ -0.95
CLK4-206ENST00000520878 BAGE3Q86Y29 109 aa9.13□□□□□ -0.95
CLK4-206ENST00000520878 ST6GALNAC6Q969X2 333 aa9.13□□□□□ -0.95
CLK4-206ENST00000520878 IMMP2LQ96T52 175 aa9.13□□□□□ -0.95
CLK4-206ENST00000520878 TPPP3Q9BW30 176 aa9.13□□□□□ -0.95
CLK4-206ENST00000520878 BPESC1Q9GZL8 116 aa9.13□□□□□ -0.95
CLK4-206ENST00000520878 TPTE2P1Q5T6R2 138 aa9.12□□□□□ -0.95
CLK4-206ENST00000520878 VMO1Q7Z5L0 202 aa9.12□□□□□ -0.95
CLK4-206ENST00000520878 SPENQ96T58 3664 aaKnown RBP9.12□□□□□ -0.95
CLK4-206ENST00000520878 SH2D7A6NKC9 451 aaPredicted RBP9.12□□□□□ -0.95
CLK4-206ENST00000520878 PRSS46E5RG02 174 aa9.12□□□□□ -0.95
CLK4-206ENST00000520878 NBR2O15453 112 aa9.12□□□□□ -0.95
CLK4-206ENST00000520878 PRR20EP86478 221 aa9.12□□□□□ -0.95
CLK4-206ENST00000520878 PRR20CP86479 221 aa9.12□□□□□ -0.95
CLK4-206ENST00000520878 PRR20DP86480 221 aa9.12□□□□□ -0.95
CLK4-206ENST00000520878 PRR20BP86481 221 aa9.12□□□□□ -0.95
CLK4-206ENST00000520878 PRR20AP86496 221 aa9.12□□□□□ -0.95
CLK4-206ENST00000520878 TXNDC17Q9BRA2 123 aa9.12□□□□□ -0.95
CLK4-206ENST00000520878 USP9XQ93008 2570 aaPredicted RBP9.12□□□□□ -0.95
CLK4-206ENST00000520878 NOTCH2Q04721 2471 aa9.12□□□□□ -0.95
CLK4-206ENST00000520878 CBLN1P23435 193 aa9.11□□□□□ -0.95
CLK4-206ENST00000520878 ZNF841Q6ZN19 808 aa9.11□□□□□ -0.95
CLK4-206ENST00000520878 TNFRSF14Q92956 283 aa9.11□□□□□ -0.95
CLK4-206ENST00000520878 EAF1Q96JC9 268 aaPredicted RBP9.11□□□□□ -0.95
CLK4-206ENST00000520878 NAT8BQ9UHF3 227 aa9.11□□□□□ -0.95
CLK4-206ENST00000520878 TGOLN2O43493 480 aa9.11□□□□□ -0.95
CLK4-206ENST00000520878 CA1P00915 261 aaPredicted RBP9.11□□□□□ -0.95
CLK4-206ENST00000520878 PRR31Q5SQ13 230 aa9.11□□□□□ -0.95
CLK4-206ENST00000520878 Q8N7P7 452 aa9.11□□□□□ -0.95
CLK4-206ENST00000520878 RNF2Q99496 336 aa9.11□□□□□ -0.95
CLK4-206ENST00000520878 SRD5A3Q9H8P0 318 aa9.11□□□□□ -0.95
CLK4-206ENST00000520878 HIGD1AQ9Y241 93 aa9.11□□□□□ -0.95
CLK4-206ENST00000520878 GRIFINA4D1Z8 144 aa9.11□□□□□ -0.95
CLK4-206ENST00000520878 IGLV2-23P01705 113 aa9.11□□□□□ -0.95
CLK4-206ENST00000520878 FCGR2BP31994 310 aaPredicted RBP9.11□□□□□ -0.95
CLK4-206ENST00000520878 CAMPP49913 170 aa9.11□□□□□ -0.95
CLK4-206ENST00000520878 DLX6P56179 175 aa9.11□□□□□ -0.95
CLK4-206ENST00000520878 PMS2P11Q13670 270 aa9.11□□□□□ -0.95
CLK4-206ENST00000520878 RPEL1Q2QD12 228 aa9.11□□□□□ -0.95
CLK4-206ENST00000520878 KIAA1644Q3SXP7 199 aa9.11□□□□□ -0.95
CLK4-206ENST00000520878 CCDC144NLQ6NUI1 221 aa9.11□□□□□ -0.95
CLK4-206ENST00000520878 C11orf42Q8N5U0 333 aa9.11□□□□□ -0.95
CLK4-206ENST00000520878 ZNF462Q96JM2 2506 aa9.1□□□□□ -0.95
CLK4-206ENST00000520878 A1L4Q6 167 aa9.1□□□□□ -0.95
CLK4-206ENST00000520878 OR2J3O76001 311 aa9.1□□□□□ -0.95
CLK4-206ENST00000520878 IGLV1-47P01700 117 aa9.1□□□□□ -0.95
CLK4-206ENST00000520878 NBEAP1P0C6P0 100 aa9.1□□□□□ -0.95
CLK4-206ENST00000520878 CDX1P47902 265 aaPredicted RBP9.1□□□□□ -0.95
CLK4-206ENST00000520878 COMPP49747 757 aaPredicted RBP9.1□□□□□ -0.95
CLK4-206ENST00000520878 FBXL19-AS1Q494R0 122 aa9.1□□□□□ -0.95
CLK4-206ENST00000520878 AARDQ4LEZ3 155 aa9.1□□□□□ -0.95
CLK4-206ENST00000520878 C1orf159Q96HA4 380 aa9.1□□□□□ -0.95
CLK4-206ENST00000520878 MS4A10Q96PG2 267 aa9.1□□□□□ -0.95
CLK4-206ENST00000520878 SAMD10Q9BYL1 202 aa9.1□□□□□ -0.95
CLK4-206ENST00000520878 SNURFLB1AK76 121 aa9.1□□□□□ -0.95
CLK4-206ENST00000520878 IL4P05112 153 aa9.1□□□□□ -0.95
CLK4-206ENST00000520878 HIST1H1BP16401 226 aaKnown RBP9.1□□□□□ -0.95
CLK4-206ENST00000520878 TEX38Q6PEX7 206 aa9.1□□□□□ -0.95
CLK4-206ENST00000520878 TMEM68Q96MH6 324 aa9.1□□□□□ -0.95
CLK4-206ENST00000520878 IGHV3OR16-13A0A075B7E8 117 aa9.1□□□□□ -0.95
CLK4-206ENST00000520878 IGHV3-74A0A0B4J1X5 117 aa9.1□□□□□ -0.95
CLK4-206ENST00000520878 PFN1P07737 140 aaKnown RBP9.1□□□□□ -0.95
CLK4-206ENST00000520878 PSG1P11464 419 aa9.1□□□□□ -0.95
CLK4-206ENST00000520878 IBA57Q5T440 356 aaKnown RBP9.1□□□□□ -0.95
CLK4-206ENST00000520878 OR1L6Q8NGR2 347 aa9.1□□□□□ -0.95
CLK4-206ENST00000520878 PACRGQ96M98 296 aaPredicted RBP9.1□□□□□ -0.95
CLK4-206ENST00000520878 C19orf24Q9BVV8 132 aa9.1□□□□□ -0.95
CLK4-206ENST00000520878 ZNF331Q9NQX6 463 aaPredicted RBP9.1□□□□□ -0.95
CLK4-206ENST00000520878 TMEM242Q9NWH2 141 aa9.1□□□□□ -0.95
CLK4-206ENST00000520878 NAV2Q8IVL1 2488 aa9.09□□□□□ -0.95
CLK4-206ENST00000520878 TRBV20OR9-2A0A075B6H5 130 aa9.09□□□□□ -0.95
CLK4-206ENST00000520878 TRBV24-1A0A075B6N3 115 aa9.09□□□□□ -0.95
CLK4-206ENST00000520878 IGLC7A0M8Q6 106 aa9.09□□□□□ -0.95
CLK4-206ENST00000520878 ZNF705FA8MVS1 300 aaPredicted RBP9.09□□□□□ -0.95
CLK4-206ENST00000520878 CORTO00230 105 aa9.09□□□□□ -0.95
CLK4-206ENST00000520878 UBE2CO00762 179 aa9.09□□□□□ -0.95
CLK4-206ENST00000520878 GATCO43716 136 aaKnown RBP9.09□□□□□ -0.95
CLK4-206ENST00000520878 SCGB1D1O95968 90 aa9.09□□□□□ -0.95
CLK4-206ENST00000520878 ZNF705DP0CH99 300 aaPredicted RBP9.09□□□□□ -0.95
CLK4-206ENST00000520878 ZNF705BP0CI00 300 aaPredicted RBP9.09□□□□□ -0.95
CLK4-206ENST00000520878 HOXA5P20719 270 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms