RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 STAG3L2P0CL84 134 aa11.43□□□□□ -0.58
CLN8-204ENST00000519254 STAG3L3P0CL85 134 aa11.43□□□□□ -0.58
CLN8-204ENST00000519254 SPATA31B1PQ5VZV4 182 aa11.43□□□□□ -0.58
CLN8-204ENST00000519254 ZNF562Q6V9R5 426 aa11.43□□□□□ -0.58
CLN8-204ENST00000519254 CYP2G1PQ6ZSU1 146 aa11.43□□□□□ -0.58
CLN8-204ENST00000519254 RASL11BQ9BPW5 248 aa11.43□□□□□ -0.58
CLN8-204ENST00000519254 TLN2Q9Y4G6 2542 aa11.43□□□□□ -0.58
CLN8-204ENST00000519254 NUPL2O15504 423 aaKnown RBP11.42□□□□□ -0.58
CLN8-204ENST00000519254 CTRB1P17538 263 aa11.42□□□□□ -0.58
CLN8-204ENST00000519254 IER3P46695 156 aa11.42□□□□□ -0.58
CLN8-204ENST00000519254 RND2P52198 227 aa11.42□□□□□ -0.58
CLN8-204ENST00000519254 CD81P60033 236 aa11.42□□□□□ -0.58
CLN8-204ENST00000519254 RHOBP62745 196 aa11.42□□□□□ -0.58
CLN8-204ENST00000519254 CX3CL1P78423 397 aa11.42□□□□□ -0.58
CLN8-204ENST00000519254 CTRB2Q6GPI1 263 aa11.42□□□□□ -0.58
CLN8-204ENST00000519254 ETFRF1Q6IPR1 90 aa11.42□□□□□ -0.58
CLN8-204ENST00000519254 SIGLECL1Q8N7X8 197 aa11.42□□□□□ -0.58
CLN8-204ENST00000519254 Q8N9W7 124 aa11.42□□□□□ -0.58
CLN8-204ENST00000519254 RBM14Q96PK6 669 aaKnown RBP11.42□□□□□ -0.58
CLN8-204ENST00000519254 FAM103A1Q9BTL3 118 aaKnown RBP11.42□□□□□ -0.58
CLN8-204ENST00000519254 WNT10AQ9GZT5 417 aa11.42□□□□□ -0.58
CLN8-204ENST00000519254 MANBALQ9NQG1 85 aa11.42□□□□□ -0.58
CLN8-204ENST00000519254 MOB4Q9Y3A3 225 aa11.42□□□□□ -0.58
CLN8-204ENST00000519254 A6NDX4 124 aa11.41□□□□□ -0.58
CLN8-204ENST00000519254 CORTO00230 105 aa11.41□□□□□ -0.58
CLN8-204ENST00000519254 ARL14EPLP0DKL9 152 aa11.41□□□□□ -0.58
CLN8-204ENST00000519254 PSMB3P49720 205 aa11.41□□□□□ -0.58
CLN8-204ENST00000519254 CEBPGP53567 150 aa11.41□□□□□ -0.58
CLN8-204ENST00000519254 FAM90A2PQ658T7 463 aa11.41□□□□□ -0.58
CLN8-204ENST00000519254 Q6YL49 198 aa11.41□□□□□ -0.58
CLN8-204ENST00000519254 IQCF2Q8IXL9 164 aa11.41□□□□□ -0.58
CLN8-204ENST00000519254 GSX1Q9H4S2 264 aaPredicted RBP11.41□□□□□ -0.58
CLN8-204ENST00000519254 PITPNC1Q9UKF7 332 aa11.41□□□□□ -0.58
CLN8-204ENST00000519254 IGHV3-21A0A0B4J1V1 117 aa11.41□□□□□ -0.58
CLN8-204ENST00000519254 TCRBV4S1A1TA0A5B7 111 aa11.41□□□□□ -0.58
CLN8-204ENST00000519254 PSMB11A5LHX3 300 aa11.41□□□□□ -0.58
CLN8-204ENST00000519254 HOXA3O43365 443 aaPredicted RBP11.41□□□□□ -0.58
CLN8-204ENST00000519254 PAGE4O60829 102 aa11.41□□□□□ -0.58
CLN8-204ENST00000519254 CXorf1O96002 111 aa11.41□□□□□ -0.58
CLN8-204ENST00000519254 MT-CO2P00403 227 aa11.41□□□□□ -0.58
CLN8-204ENST00000519254 NDPQ00604 133 aa11.41□□□□□ -0.58
CLN8-204ENST00000519254 MEF2BQ02080 365 aaPredicted RBP11.41□□□□□ -0.58
CLN8-204ENST00000519254 ZNF90Q03938 601 aa11.41□□□□□ -0.58
CLN8-204ENST00000519254 ASPHD1Q5U4P2 390 aa11.41□□□□□ -0.58
CLN8-204ENST00000519254 TMEM88Q6PEY1 159 aa11.41□□□□□ -0.58
CLN8-204ENST00000519254 TMEM116Q8NCL8 245 aa11.41□□□□□ -0.58
CLN8-204ENST00000519254 SUN5Q8TC36 379 aa11.41□□□□□ -0.58
CLN8-204ENST00000519254 TMA7Q9Y2S6 64 aaKnown RBP11.41□□□□□ -0.58
CLN8-204ENST00000519254 I3L2K1 104 aa11.4□□□□□ -0.58
CLN8-204ENST00000519254 FOSL1P15407 271 aa11.4□□□□□ -0.58
CLN8-204ENST00000519254 TAGLN2P37802 199 aaKnown RBP11.4□□□□□ -0.58
CLN8-204ENST00000519254 AWAT1Q58HT5 328 aa11.4□□□□□ -0.58
CLN8-204ENST00000519254 FAM78BQ5VT40 261 aa11.4□□□□□ -0.58
CLN8-204ENST00000519254 MIR17HGQ75NE6 70 aa11.4□□□□□ -0.58
CLN8-204ENST00000519254 CBLN2Q8IUK8 224 aa11.4□□□□□ -0.58
CLN8-204ENST00000519254 C5orf56Q8N8D9 126 aa11.4□□□□□ -0.58
CLN8-204ENST00000519254 TMEM37Q8WXS4 190 aa11.4□□□□□ -0.58
CLN8-204ENST00000519254 ARPC1AQ92747 370 aa11.4□□□□□ -0.58
CLN8-204ENST00000519254 DUX5Q96PT3 197 aa11.4□□□□□ -0.58
CLN8-204ENST00000519254 FUT9Q9Y231 359 aa11.4□□□□□ -0.58
CLN8-204ENST00000519254 PUS1Q9Y606 427 aaKnown RBP eCLIP11.4□□□□□ -0.58
CLN8-204ENST00000519254 ZFHX3Q15911 3703 aa11.4□□□□□ -0.58
CLN8-204ENST00000519254 IGHV7-81A0A0B4J1V7 117 aa11.39□□□□□ -0.59
CLN8-204ENST00000519254 H3BQ15 152 aa11.39□□□□□ -0.59
CLN8-204ENST00000519254 OR5G3P0C626 314 aa11.39□□□□□ -0.59
CLN8-204ENST00000519254 EGR2P11161 476 aaPredicted RBP11.39□□□□□ -0.59
CLN8-204ENST00000519254 C9orf152Q5JTZ5 239 aa11.39□□□□□ -0.59
CLN8-204ENST00000519254 OR5R1Q8NH85 324 aa11.39□□□□□ -0.59
CLN8-204ENST00000519254 HSPB9Q9BQS6 159 aa11.39□□□□□ -0.59
CLN8-204ENST00000519254 C20orf24Q9BUV8 137 aa11.39□□□□□ -0.59
CLN8-204ENST00000519254 C19orf24Q9BVV8 132 aa11.39□□□□□ -0.59
CLN8-204ENST00000519254 TMEM160Q9NX00 188 aa11.39□□□□□ -0.59
CLN8-204ENST00000519254 SONP18583 2426 aaKnown RBP11.39□□□□□ -0.59
CLN8-204ENST00000519254 C7orf77A4D0Y5 90 aa11.39□□□□□ -0.59
CLN8-204ENST00000519254 M0R036 132 aa11.39□□□□□ -0.59
CLN8-204ENST00000519254 NDUFS6O75380 124 aaKnown RBP11.39□□□□□ -0.59
CLN8-204ENST00000519254 SRD5A1P18405 259 aa11.39□□□□□ -0.59
CLN8-204ENST00000519254 GCHFRP30047 84 aa11.39□□□□□ -0.59
CLN8-204ENST00000519254 SELENOTP62341 195 aa11.39□□□□□ -0.59
CLN8-204ENST00000519254 AKIRIN2Q53H80 203 aa11.39□□□□□ -0.59
CLN8-204ENST00000519254 TRGV9Q99603 122 aa11.39□□□□□ -0.59
CLN8-204ENST00000519254 NPIPB5A8MRT5 1133 aa11.38□□□□□ -0.59
CLN8-204ENST00000519254 K7EIM0 57 aa11.38□□□□□ -0.59
CLN8-204ENST00000519254 HLA-DRB1P01911 266 aa11.38□□□□□ -0.59
CLN8-204ENST00000519254 AKR1C3P42330 323 aa11.38□□□□□ -0.59
CLN8-204ENST00000519254 DNAJC4Q9NNZ3 241 aa11.38□□□□□ -0.59
CLN8-204ENST00000519254 VPREB3Q9UKI3 123 aa11.38□□□□□ -0.59
CLN8-204ENST00000519254 INAFM1C9JVW0 142 aa11.37□□□□□ -0.59
CLN8-204ENST00000519254 AMY1AP04745 511 aa11.37□□□□□ -0.59
CLN8-204ENST00000519254 UBE2G2P60604 165 aa11.37□□□□□ -0.59
CLN8-204ENST00000519254 PATE2Q6UY27 113 aa11.37□□□□□ -0.59
CLN8-204ENST00000519254 TTC9CQ8N5M4 171 aa11.37□□□□□ -0.59
CLN8-204ENST00000519254 OR1L6Q8NGR2 347 aa11.37□□□□□ -0.59
CLN8-204ENST00000519254 OR4F5Q8NH21 305 aa11.37□□□□□ -0.59
CLN8-204ENST00000519254 ZNF503Q96F45 646 aa11.37□□□□□ -0.59
CLN8-204ENST00000519254 FANCD2OSQ96PS1 177 aa11.37□□□□□ -0.59
CLN8-204ENST00000519254 OR4F4Q96R69 305 aa11.37□□□□□ -0.59
CLN8-204ENST00000519254 PRDM13Q9H4Q3 707 aa11.37□□□□□ -0.59
CLN8-204ENST00000519254 RPS10P5Q9NQ39 176 aa11.37□□□□□ -0.59
CLN8-204ENST00000519254 CDC42EP3Q9UKI2 254 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 159.2 ms